CSPI03G13130 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G13130
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionsecE/sec61-gamma protein transport protein
LocationChr3 : 9951753 .. 9952518 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACTGTCAAGTTCAACCGATTTATCCAATCTGATTCTCCACCGCTCACCGACAGGGAAAATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGAAAGTTCGATTTTTTTTCTTGAGATGTAAACTTTGTAACTGAAATTCATTGGCTTCTACGGAAGAAACTGGATTGTAATTTGTGTTAAGAAGGAAGAATCCGTTGCAGCATAATCAAACTAAGTGAAATTTGAAGAGTATTTTAAAACTTAAAACTTCCTATTGAAC

mRNA sequence

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Coding sequence (CDS)

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTGCGACGGAGCTCCCCTCATCATTCTTATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA
Homology
[Close]
BLAST of CSPI03G13130 vs. Swiss-Prot
Match: SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-26
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1 

Query: 43  IRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]
BLAST of CSPI03G13130 vs. TrEMBL
Match: A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 6.8e-89
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHS+PHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]
BLAST of CSPI03G13130 vs. TrEMBL
Match: M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-29
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +S++FP  P+ L            R  P  +  HS    +     ++   K S + 
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQSLLK 60

Query: 61  AVQESQENTES--DGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLI 120
           AV ESQ N+ES  + V  Q      + ++A       + LG EI+EA++++K EK+GD +
Sbjct: 61  AVDESQANSESGPESVSTQQKESAGDGESAASQPVELSELGKEIKEAMQKRKEEKDGDFL 120

Query: 121 GGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 180
            GVA+E++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKGVQDFF
Sbjct: 121 SGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKGVQDFF 180

[Close]
BLAST of CSPI03G13130 vs. TrEMBL
Match: A0A067L6Q9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.9e-29
Identity = 76/119 (63.87%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEA-LKQQKVEKEGDLIG 120
           AV ESQE+TES+  +        E +++++S+   + LGAEI++A L+++K EK+GDL+ 
Sbjct: 60  AVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLLS 119

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           GVAEE++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 120 GVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

[Close]
BLAST of CSPI03G13130 vs. TrEMBL
Match: V4RGX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006055mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-27
Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +SL  P  P        S   P+     H+             +  NR+V   AV 
Sbjct: 1   MALSLSLHLPVTPVLPKAYVQSKPPPVS----HYISLRRLRLTSATALGKNRSVLVKAVE 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
             QES E +E+        P +E    A +S+   + LG+EI++ LK++K EK GDL+ G
Sbjct: 61  RSQESAEKSETVNE-----PESEPANPATESSAELSELGSEIKKVLKEKKEEKAGDLLSG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           V EEI+EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVN +LAELSDR FAG+GVQDFF
Sbjct: 121 VGEEIREIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNFVLAELSDRAFAGRGVQDFF 169

[Close]
BLAST of CSPI03G13130 vs. TrEMBL
Match: A0A067G4N7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030842mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-27
Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +SL  P  P        S   P+     H+             +  NR+V   AV 
Sbjct: 1   MALSLSLHLPVTPVLPKAYVQSKPPPVS----HYISLRRLRLTSATALGKNRSVLVKAVE 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
             QES E +E+        P +E    A +S+   + LG+EI++ LK++K EK GDL+ G
Sbjct: 61  RSQESAEKSETVNE-----PESEPANPATESSAELSELGSEIKKVLKEKKEEKAGDLLSG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           V EEI+EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVN +LAELSDR FAG+GVQDFF
Sbjct: 121 VGEEIREIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNFVLAELSDRAFAGRGVQDFF 169

[Close]
BLAST of CSPI03G13130 vs. TAIR10
Match: AT4G14870.1 (AT4G14870.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1 

Query: 43  IRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEI 102
           IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]
BLAST of CSPI03G13130 vs. NCBI nr
Match: gi|449432698|ref|XP_004134136.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 9.8e-89
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHS+PHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]
BLAST of CSPI03G13130 vs. NCBI nr
Match: gi|659076435|ref|XP_008438678.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84
Identity = 173/180 (96.11%), Postives = 177/180 (98.33%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPL-RRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVPL R+SS HHS+PHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]
BLAST of CSPI03G13130 vs. NCBI nr
Match: gi|645235523|ref|XP_008224311.1| (PREDICTED: preprotein translocase subunit SECE1 [Prunus mume])

HSP 1 Score: 136.7 bits (343), Expect = 3.9e-29
Identity = 92/189 (48.68%), Postives = 119/189 (62.96%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +S++FP   + L +  A       R  P  +  HS    +     ++   K S + 
Sbjct: 1   MALRMSVQFPITSAFLLSAKAGHVNSSVRLKPPCACNHSVSQFQPRRPLTDTRSKQSLLK 60

Query: 61  AVQESQENTESDGVEV---QAGPPTEEPKTADQSAESGAN-------LGAEIQEALKQQK 120
           AV ESQ N+ES    V   Q    + + K +    ES A+       LG EI+EA++++K
Sbjct: 61  AVDESQANSESGPESVSTQQKESASTQQKESAGDGESAASQPVELSELGKEIKEAMQKRK 120

Query: 121 VEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFA 180
            EKEGD + GVA+E++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SDRVFA
Sbjct: 121 EEKEGDFLSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDRVFA 180

[Close]
BLAST of CSPI03G13130 vs. NCBI nr
Match: gi|596288401|ref|XP_007225931.1| (hypothetical protein PRUPE_ppa012169mg [Prunus persica])

HSP 1 Score: 136.3 bits (342), Expect = 5.1e-29
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 1 

Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSYPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +S++FP  P+ L            R  P  +  HS    +     ++   K S + 
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQSLLK 60

Query: 61  AVQESQENTES--DGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLI 120
           AV ESQ N+ES  + V  Q      + ++A       + LG EI+EA++++K EK+GD +
Sbjct: 61  AVDESQANSESGPESVSTQQKESAGDGESAASQPVELSELGKEIKEAMQKRKEEKDGDFL 120

Query: 121 GGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 180
            GVA+E++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKGVQDFF
Sbjct: 121 SGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKGVQDFF 180

[Close]
BLAST of CSPI03G13130 vs. NCBI nr
Match: gi|802581294|ref|XP_012069638.1| (PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas])

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 76/119 (63.87%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEA-LKQQKVEKEGDLIG 120
           AV ESQE+TES+  +        E +++++S+   + LGAEI++A L+++K EK+GDL+ 
Sbjct: 60  AVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLLS 119

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           GVAEE++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 120 GVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

The following BLAST results are available for this feature:
BLAST of CSPI03G13130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SECE1_ARATH2.4e-2650.35Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1[more]
BLAST of CSPI03G13130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5J0_CUCSA6.8e-8999.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1[more]
M5Y5G6_PRUPE3.6e-2948.07Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1[more]
A0A067L6Q9_JATCU7.9e-2963.87Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1[more]
V4RGX3_9ROSI1.5e-2748.31Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006055mg PE=4 SV=1[more]
A0A067G4N7_CITSI1.5e-2748.31Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030842mg PE=4 SV=1[more]
BLAST of CSPI03G13130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14870.11.3e-2750.35 secE/sec61-gamma protein transport protein[more]
BLAST of CSPI03G13130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432698|ref|XP_004134136.1|9.8e-8999.44PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus][more]
gi|659076435|ref|XP_008438678.1|1.1e-8496.11PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo][more]
gi|645235523|ref|XP_008224311.1|3.9e-2948.68PREDICTED: preprotein translocase subunit SECE1 [Prunus mume][more]
gi|596288401|ref|XP_007225931.1|5.1e-2948.07hypothetical protein PRUPE_ppa012169mg [Prunus persica][more]
gi|802581294|ref|XP_012069638.1|1.1e-2863.87PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001901Translocase_SecE/Sec61-g
Vocabulary: Biological Process
TermDefinition
GO:0006605protein targeting
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0006886 intracellular protein transport
biological_process GO:0009306 protein secretion
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G13130.1CSPI03G13130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 118..164
score: 4.
NoneNo IPR availableGENE3DG3DSA:1.20.5.1030coord: 118..166
score: 2.
NoneNo IPR availablePANTHERPTHR37240FAMILY NOT NAMEDcoord: 1..178
score: 8.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G13130Cla021626Watermelon (97103) v1cpiwmB231
CSPI03G13130Csa3G146680Cucumber (Chinese Long) v2cpicuB120
CSPI03G13130MELO3C006532Melon (DHL92) v3.5.1cpimeB230
CSPI03G13130Lsi05G016040Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G13130MELO3C006532.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G13130CsaV3_3G013300Cucumber (Chinese Long) v3cpicucB144
CSPI03G13130Cla97C05G086350Watermelon (97103) v2cpiwmbB209
CSPI03G13130Bhi01G000585Wax gourdcpiwgoB269
CSPI03G13130Cucsa.254300Cucumber (Gy14) v1cgycpiB383
CSPI03G13130CmaCh14G017070Cucurbita maxima (Rimu)cmacpiB255
CSPI03G13130CmoCh14G017500Cucurbita moschata (Rifu)cmocpiB243
CSPI03G13130Cp4.1LG03g10590Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G13130CsGy3G013280Cucumber (Gy14) v2cgybcpiB110
CSPI03G13130Carg23521Silver-seed gourdcarcpiB0884
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G13130Silver-seed gourdcarcpiB0074
CSPI03G13130Silver-seed gourdcarcpiB0355
CSPI03G13130Silver-seed gourdcarcpiB0639
CSPI03G13130Watermelon (97103) v2cpiwmbB239
CSPI03G13130Watermelon (97103) v2cpiwmbB266
CSPI03G13130Wax gourdcpiwgoB252
CSPI03G13130Cucurbita maxima (Rimu)cmacpiB359
CSPI03G13130Cucurbita maxima (Rimu)cmacpiB826
CSPI03G13130Cucurbita maxima (Rimu)cmacpiB903
CSPI03G13130Cucurbita moschata (Rifu)cmocpiB352
CSPI03G13130Cucurbita moschata (Rifu)cmocpiB814
CSPI03G13130Cucurbita moschata (Rifu)cmocpiB883
CSPI03G13130Watermelon (Charleston Gray)cpiwcgB185
CSPI03G13130Watermelon (Charleston Gray)cpiwcgB226
CSPI03G13130Watermelon (Charleston Gray)cpiwcgB255
CSPI03G13130Watermelon (97103) v1cpiwmB189
CSPI03G13130Watermelon (97103) v1cpiwmB281
CSPI03G13130Cucurbita pepo (Zucchini)cpecpiB312
CSPI03G13130Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G13130Bottle gourd (USVL1VR-Ls)cpilsiB149
CSPI03G13130Melon (DHL92) v3.6.1cpimedB176