Cp4.1LG03g10590 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGTATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAACACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGTGTGGTGATCGGGGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCGTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGTATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAACACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGTGTGGTGATCGGGGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCGTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGTATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAACACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGTGTGGTGATCGGGGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCGTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA MAVPISLRFPTVPSTLTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVNAVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
BLAST of Cp4.1LG03g10590 vs. Swiss-Prot
Match: SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-26 Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TrEMBL
Match: A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 5.1e-76 Identity = 159/179 (88.83%), Postives = 164/179 (91.62%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TrEMBL
Match: M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 6.0e-29 Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TrEMBL
Match: A0A067L6Q9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.5e-27 Identity = 85/180 (47.22%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TrEMBL
Match: A0A058ZTJ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01274 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27 Identity = 82/144 (56.94%), Postives = 103/144 (71.53%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TrEMBL
Match: A0A058ZSS2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02493 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. TAIR10
Match: AT4G14870.1 (AT4G14870.1 secE/sec61-gamma protein transport protein) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27 Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. NCBI nr
Match: gi|449432698|ref|XP_004134136.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus]) HSP 1 Score: 292.0 bits (746), Expect = 7.2e-76 Identity = 159/179 (88.83%), Postives = 164/179 (91.62%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. NCBI nr
Match: gi|659076435|ref|XP_008438678.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]) HSP 1 Score: 289.3 bits (739), Expect = 4.7e-75 Identity = 160/180 (88.89%), Postives = 165/180 (91.67%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. NCBI nr
Match: gi|645235523|ref|XP_008224311.1| (PREDICTED: preprotein translocase subunit SECE1 [Prunus mume]) HSP 1 Score: 136.7 bits (343), Expect = 3.9e-29 Identity = 99/194 (51.03%), Postives = 126/194 (64.95%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. NCBI nr
Match: gi|596288401|ref|XP_007225931.1| (hypothetical protein PRUPE_ppa012169mg [Prunus persica]) HSP 1 Score: 135.6 bits (340), Expect = 8.7e-29 Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 1
BLAST of Cp4.1LG03g10590 vs. NCBI nr
Match: gi|802581294|ref|XP_012069638.1| (PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas]) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27 Identity = 85/180 (47.22%), Postives = 119/180 (66.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |