CmoCh14G017500 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G017500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSecE/sec61-gamma protein transport protein
LocationCmo_Chr14 : 13599618 .. 13600157 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTCACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

mRNA sequence

ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTCACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

Coding sequence (CDS)

ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTCACTAACAGAGCGGCCTCCTTGTTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAGTCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA
Homology
[Close]
BLAST of CmoCh14G017500 vs. Swiss-Prot
Match: SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-26
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1 

Query: 39  LHRTIRLPGIRSRRNSMFSAVNAVQESQENTESDGVEVQAGPPREESKTADQPAESGENL 98
           ++  IR     + R S      A+++ ++   S+        P EES + +        +
Sbjct: 33  VYTEIRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAI 92

Query: 99  GAEIQEALKQRKVEKE----GDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVL 158
           GAEI+ A++QRK  +E     + + GVAEE+++IEWPAF+KVLGTTGVV+GVIAGSSVVL
Sbjct: 93  GAEIKAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVL 152

Query: 159 LTVNALLAELSDRVFAGKGVQDFFS 180
           LTVN LLAELSDRVF G+GVQDFFS
Sbjct: 153 LTVNFLLAELSDRVFIGRGVQDFFS 177

[Close]
BLAST of CmoCh14G017500 vs. TrEMBL
Match: A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-75
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 1 

Query: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60
           MAVPISL+FPTVPST TNR ASLFV LRRSS +HSHPH   TIR P IRS RN  FSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]
BLAST of CmoCh14G017500 vs. TrEMBL
Match: M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28
Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 1 

Query: 1   MAVPISLRFPTVPS-TFTNRAASLFVSLRRS---SAYHSHPHLHRTIRLPGIRSRRNSMF 60
           MA+ +S++FP  P+     +   +  S+R     +  HS         L   RS++    
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQ---- 60

Query: 61  SAVNAVQESQENTESDGVEV---QAGPPREESKTADQPAESGENLGAEIQEALKQRKVEK 120
           S + AV ESQ N+ES    V   Q     +    A QP E  E LG EI+EA+++RK EK
Sbjct: 61  SLLKAVDESQANSESGPESVSTQQKESAGDGESAASQPVELSE-LGKEIKEAMQKRKEEK 120

Query: 121 EGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKG 180
           +GD + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKG
Sbjct: 121 DGDFLSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKG 180

[Close]
BLAST of CmoCh14G017500 vs. TrEMBL
Match: A0A067L6Q9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-27
Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 1 

Query: 1   MAVP-ISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAV 60
           MA+P +S + P V        ++  +  +      S    HR   +   +S   +     
Sbjct: 1   MALPSLSPKLPHVVPPVATAQSNPSIQFKLPPFAGSSVLFHRKFAITNQKSGNGAFLR-- 60

Query: 61  NAVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEA-LKQRKVEKEGDLI 120
            AV ESQE+TES+  +        E++++++ +     LGAEI++A L+++K EK+GDL+
Sbjct: 61  RAVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLL 120

Query: 121 GGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
            GVAEE+Q+IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 121 SGVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

[Close]
BLAST of CmoCh14G017500 vs. TrEMBL
Match: A0A058ZTJ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01274 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27
Identity = 82/144 (56.94%), Postives = 103/144 (71.53%), Query Frame = 1 

Query: 46  PGIRSRRNSMFS-------AVNAVQESQENTESDGVEVQAGPPREESKTADQ-PAESGE- 105
           P I S  + ++S        V AV+ESQE TESD   VQ     +E+++ DQ P ES   
Sbjct: 63  PSIGSEGSLLYSNTHRQSHVVRAVEESQERTESD---VQNSDNFKETESIDQKPNESTAE 122

Query: 106 --NLGAEIQEALKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVL 165
              LG EI++AL+QRK + +G+L+ GVAEEI +IEWP F KVLG TGVV+GVIAGSSV L
Sbjct: 123 LTELGTEIKKALEQRKEKADGNLLSGVAEEIGEIEWPTFGKVLGITGVVLGVIAGSSVTL 182

Query: 166 LTVNALLAELSDRVFAGKGVQDFF 179
           LT+NA+LAELSD+VFAGKG+QDFF
Sbjct: 183 LTLNAILAELSDKVFAGKGIQDFF 203

[Close]
BLAST of CmoCh14G017500 vs. TrEMBL
Match: A0A058ZSS2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02493 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27
Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1 

Query: 46  PGIRSRRNSMFS-------AVNAVQESQENTESDGVEVQAGPPREESKTADQ-PAESGE- 105
           P I S  + ++S        V AV+ESQE+TESD   VQ     +E+++ DQ P ES   
Sbjct: 55  PSIGSEGSLLYSNTHRQSHVVRAVEESQESTESD---VQNRDNFKETESIDQNPNESTAE 114

Query: 106 --NLGAEIQEALKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVL 165
              LG EI++AL+QRK + +G+L+ GVAEEI +IEWP F KVLG TGVV+GVIAGSSV L
Sbjct: 115 LTELGTEIKKALEQRKEKADGNLLSGVAEEIGEIEWPTFGKVLGITGVVLGVIAGSSVTL 174

Query: 166 LTVNALLAELSDRVFAGKGVQDFF 179
           LT+NA+LAELSD+VFAGKG+QDFF
Sbjct: 175 LTLNAILAELSDKVFAGKGIQDFF 195

[Close]
BLAST of CmoCh14G017500 vs. TAIR10
Match: AT4G14870.1 (AT4G14870.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1 

Query: 39  LHRTIRLPGIRSRRNSMFSAVNAVQESQENTESDGVEVQAGPPREESKTADQPAESGENL 98
           ++  IR     + R S      A+++ ++   S+        P EES + +        +
Sbjct: 33  VYTEIRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAI 92

Query: 99  GAEIQEALKQRKVEKE----GDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVL 158
           GAEI+ A++QRK  +E     + + GVAEE+++IEWPAF+KVLGTTGVV+GVIAGSSVVL
Sbjct: 93  GAEIKAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVL 152

Query: 159 LTVNALLAELSDRVFAGKGVQDFFS 180
           LTVN LLAELSDRVF G+GVQDFFS
Sbjct: 153 LTVNFLLAELSDRVFIGRGVQDFFS 177

[Close]
BLAST of CmoCh14G017500 vs. NCBI nr
Match: gi|449432698|ref|XP_004134136.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-75
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 1 

Query: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60
           MAVPISL+FPTVPST TNR ASLFV LRRSS +HSHPH   TIR P IRS RN  FSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]
BLAST of CmoCh14G017500 vs. NCBI nr
Match: gi|659076435|ref|XP_008438678.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.0e-74
Identity = 159/180 (88.33%), Postives = 164/180 (91.11%), Query Frame = 1 

Query: 1   MAVPISLRFPTVPSTFTNRAASLFVSL-RRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAV 60
           MAVPISL+FPTVPST TNR ASLFV L R+SS +HSHPH   TIRLP IRS RN  FSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQRKVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]
BLAST of CmoCh14G017500 vs. NCBI nr
Match: gi|645235523|ref|XP_008224311.1| (PREDICTED: preprotein translocase subunit SECE1 [Prunus mume])

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 98/194 (50.52%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 1   MAVPISLRFP-TVPSTFTNRAASLFVSLRRS---SAYHSHPHLHRTIRLPGIRSRRNSMF 60
           MA+ +S++FP T     + +A  +  S+R     +  HS         L   RS++    
Sbjct: 1   MALRMSVQFPITSAFLLSAKAGHVNSSVRLKPPCACNHSVSQFQPRRPLTDTRSKQ---- 60

Query: 61  SAVNAVQESQENTES--DGVEVQ----AGPPREES-----KTADQPAESGENLGAEIQEA 120
           S + AV ESQ N+ES  + V  Q    A   ++ES       A QP E  E LG EI+EA
Sbjct: 61  SLLKAVDESQANSESGPESVSTQQKESASTQQKESAGDGESAASQPVELSE-LGKEIKEA 120

Query: 121 LKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELS 180
           +++RK EKEGD + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE S
Sbjct: 121 MQKRKEEKEGDFLSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFS 180

[Close]
BLAST of CmoCh14G017500 vs. NCBI nr
Match: gi|596288401|ref|XP_007225931.1| (hypothetical protein PRUPE_ppa012169mg [Prunus persica])

HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28
Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 1 

Query: 1   MAVPISLRFPTVPS-TFTNRAASLFVSLRRS---SAYHSHPHLHRTIRLPGIRSRRNSMF 60
           MA+ +S++FP  P+     +   +  S+R     +  HS         L   RS++    
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQ---- 60

Query: 61  SAVNAVQESQENTESDGVEV---QAGPPREESKTADQPAESGENLGAEIQEALKQRKVEK 120
           S + AV ESQ N+ES    V   Q     +    A QP E  E LG EI+EA+++RK EK
Sbjct: 61  SLLKAVDESQANSESGPESVSTQQKESAGDGESAASQPVELSE-LGKEIKEAMQKRKEEK 120

Query: 121 EGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKG 180
           +GD + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKG
Sbjct: 121 DGDFLSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKG 180

[Close]
BLAST of CmoCh14G017500 vs. NCBI nr
Match: gi|802581294|ref|XP_012069638.1| (PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas])

HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27
Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 1 

Query: 1   MAVP-ISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAV 60
           MA+P +S + P V        ++  +  +      S    HR   +   +S   +     
Sbjct: 1   MALPSLSPKLPHVVPPVATAQSNPSIQFKLPPFAGSSVLFHRKFAITNQKSGNGAFLR-- 60

Query: 61  NAVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEA-LKQRKVEKEGDLI 120
            AV ESQE+TES+  +        E++++++ +     LGAEI++A L+++K EK+GDL+
Sbjct: 61  RAVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLL 120

Query: 121 GGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
            GVAEE+Q+IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 121 SGVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

The following BLAST results are available for this feature:
BLAST of CmoCh14G017500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SECE1_ARATH3.1e-2648.97Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1[more]
BLAST of CmoCh14G017500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5J0_CUCSA1.1e-7588.27Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1[more]
M5Y5G6_PRUPE1.8e-2849.46Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1[more]
A0A067L6Q9_JATCU1.9e-2747.22Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1[more]
A0A058ZTJ7_EUCGR5.7e-2756.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01274 PE=4 SV=1[more]
A0A058ZSS2_EUCGR7.4e-2756.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02493 PE=4 SV=1[more]
BLAST of CmoCh14G017500 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14870.11.7e-2748.97 secE/sec61-gamma protein transport protein[more]
BLAST of CmoCh14G017500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432698|ref|XP_004134136.1|1.6e-7588.27PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus][more]
gi|659076435|ref|XP_008438678.1|1.0e-7488.33PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo][more]
gi|645235523|ref|XP_008224311.1|1.1e-2850.52PREDICTED: preprotein translocase subunit SECE1 [Prunus mume][more]
gi|596288401|ref|XP_007225931.1|2.5e-2849.46hypothetical protein PRUPE_ppa012169mg [Prunus persica][more]
gi|802581294|ref|XP_012069638.1|2.8e-2747.22PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001901Translocase_SecE/Sec61-g
IPR005807SecE_bac
Vocabulary: Biological Process
TermDefinition
GO:0006605protein targeting
GO:0006886intracellular protein transport
GO:0009306protein secretion
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009306 protein secretion
biological_process GO:0006605 protein targeting
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G017500.1CmoCh14G017500.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 118..164
score: 1.
IPR005807SecE subunit of protein translocation complexTIGRFAMsTIGR00964TIGR00964coord: 118..164
score: 1.
NoneNo IPR availableGENE3DG3DSA:1.20.5.1030coord: 118..166
score: 6.
NoneNo IPR availablePANTHERPTHR37240FAMILY NOT NAMEDcoord: 1..178
score: 8.7
NoneNo IPR availablePANTHERPTHR37240:SF1PREPROTEIN TRANSLOCASE SUBUNIT SECE1coord: 1..178
score: 8.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G017500Cucsa.254300Cucumber (Gy14) v1cgycmoB0700
CmoCh14G017500CmaCh14G017070Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G017500Cla021626Watermelon (97103) v1cmowmB231
CmoCh14G017500Csa3G146680Cucumber (Chinese Long) v2cmocuB239
CmoCh14G017500MELO3C006532Melon (DHL92) v3.5.1cmomeB230
CmoCh14G017500CSPI03G13130Wild cucumber (PI 183967)cmocpiB243
CmoCh14G017500Lsi05G016040Bottle gourd (USVL1VR-Ls)cmolsiB233
CmoCh14G017500Cp4.1LG03g10590Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G017500MELO3C006532.2Melon (DHL92) v3.6.1cmomedB260
CmoCh14G017500CsaV3_3G013300Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G017500Cla97C05G086350Watermelon (97103) v2cmowmbB243
CmoCh14G017500Bhi01G000585Wax gourdcmowgoB0317
CmoCh14G017500CsGy3G013280Cucumber (Gy14) v2cgybcmoB290
CmoCh14G017500Carg23521Silver-seed gourdcarcmoB1142
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G017500Silver-seed gourdcarcmoB0096
CmoCh14G017500Silver-seed gourdcarcmoB0444
CmoCh14G017500Silver-seed gourdcarcmoB0823
CmoCh14G017500Watermelon (97103) v2cmowmbB246
CmoCh14G017500Watermelon (97103) v2cmowmbB263
CmoCh14G017500Wax gourdcmowgoB0300
CmoCh14G017500Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G017500Cucurbita moschata (Rifu)cmocmoB224
CmoCh14G017500Cucurbita moschata (Rifu)cmocmoB233
CmoCh14G017500Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G017500Cucurbita maxima (Rimu)cmacmoB797
CmoCh14G017500Cucurbita maxima (Rimu)cmacmoB883
CmoCh14G017500Watermelon (Charleston Gray)cmowcgB219
CmoCh14G017500Watermelon (97103) v1cmowmB239
CmoCh14G017500Cucurbita pepo (Zucchini)cmocpeB230
CmoCh14G017500Cucurbita pepo (Zucchini)cmocpeB254
CmoCh14G017500Bottle gourd (USVL1VR-Ls)cmolsiB213