CmaCh14G017070 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G017070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SecE/sec61-gamma protein transport protein
Location	Cma_Chr14 : 12628887 .. 12629426 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTCCGATCTCCCTGCGATTTCCGGCGGTACCTTCCACTTTAACTGACAGAGCGGCCTCCTTGTTCGTATCACTACGGCGGAGCTCCTCGCATCGTTCTCATCCTCACTCACATCGCACGATCAGACTCCCGGGGGTTAGGTCTAGAAGGAACAGCAAGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGACGGAGGAGTCGAAAACGGCTGACCAACCGGCAGAATCCGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGATCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCTGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

mRNA sequence

ATGGCCGTTCCGATCTCCCTGCGATTTCCGGCGGTACCTTCCACTTTAACTGACAGAGCGGCCTCCTTGTTCGTATCACTACGGCGGAGCTCCTCGCATCGTTCTCATCCTCACTCACATCGCACGATCAGACTCCCGGGGGTTAGGTCTAGAAGGAACAGCAAGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGACGGAGGAGTCGAAAACGGCTGACCAACCGGCAGAATCCGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGATCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCTGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

Coding sequence (CDS)

ATGGCCGTTCCGATCTCCCTGCGATTTCCGGCGGTACCTTCCACTTTAACTGACAGAGCGGCCTCCTTGTTCGTATCACTACGGCGGAGCTCCTCGCATCGTTCTCATCCTCACTCACATCGCACGATCAGACTCCCGGGGGTTAGGTCTAGAAGGAACAGCAAGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGACGGAGGAGTCGAAAACGGCTGACCAACCGGCAGAATCCGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGATCTGATTGGCGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGACCGAGTTTTCGCTGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

Protein sequence

MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVNAVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Homology

[Close]

BLAST of CmaCh14G017070 vs. Swiss-Prot
Match: SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-26
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 43  IRLPGVRSRRNSKFSAVNAVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEI 102
           IR     + R S      A+++ ++   S+        P EES + +        +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQRKVEKE----GDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++QRK  +E     + + GVAEE+++IEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of CmaCh14G017070 vs. TrEMBL
Match: A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.1e-76
Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H SHPHS  TIR P +RS RN KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CmaCh14G017070 vs. TrEMBL
Match: M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-29
Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MA+ +S++FP  P+ L         S  R     +  HS    +     +   SK S + 
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQSLLK 60

Query: 61  AVQESQENTESDGVEV---QAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDL 120
           AV ESQ N+ES    V   Q     +    A QP E  E LG EI+EA+++RK EK+GD 
Sbjct: 61  AVDESQANSESGPESVSTQQKESAGDGESAASQPVELSE-LGKEIKEAMQKRKEEKDGDF 120

Query: 121 IGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDF 180
           + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKGVQDF
Sbjct: 121 LSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKGVQDF 180

[Close]

BLAST of CmaCh14G017070 vs. TrEMBL
Match: A0A067L6Q9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-28
Identity = 75/119 (63.03%), Postives = 98/119 (82.35%), Query Frame = 1


Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEA-LKQRKVEKEGDLIG 120
           AV ESQE+TES+  +        E++++++ +     LGAEI++A L+++K EK+GDL+ 
Sbjct: 60  AVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLLS 119

Query: 121 GVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           GVAEE+Q+IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 120 GVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

[Close]

BLAST of CmaCh14G017070 vs. TrEMBL
Match: A0A067G4N7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030842mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27
Identity = 86/178 (48.31%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MA+ +SL  P  P  +  +A      ++      SH  S R +RL    +   ++   V 
Sbjct: 1   MALSLSLHLPVTP--VLPKAY-----VQSKPPPVSHYISLRRLRLTSATALGKNRSVLVK 60

Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AV+ SQE+ E    E    P +E +  A + +     LG+EI++ LK++K EK GDL+ G
Sbjct: 61  AVERSQESAEKS--ETVNEPESEPANPATESSAELSELGSEIKKVLKEKKEEKAGDLLSG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           V EEI++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVN +LAELSDR FAG+GVQDFF
Sbjct: 121 VGEEIREIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNFVLAELSDRAFAGRGVQDFF 169

[Close]

BLAST of CmaCh14G017070 vs. TrEMBL
Match: V4RGX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006055mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-27
Identity = 86/178 (48.31%), Postives = 113/178 (63.48%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MA+ +SL  P  P  +  +A      ++      SH  S R +RL    +   ++   V 
Sbjct: 1   MALSLSLHLPVTP--VLPKAY-----VQSKPPPVSHYISLRRLRLTSATALGKNRSVLVK 60

Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AV+ SQE+ E    E    P +E +  A + +     LG+EI++ LK++K EK GDL+ G
Sbjct: 61  AVERSQESAEKS--ETVNEPESEPANPATESSAELSELGSEIKKVLKEKKEEKAGDLLSG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           V EEI++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVN +LAELSDR FAG+GVQDFF
Sbjct: 121 VGEEIREIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNFVLAELSDRAFAGRGVQDFF 169

[Close]

BLAST of CmaCh14G017070 vs. TAIR10
Match: AT4G14870.1 (AT4G14870.1 secE/sec61-gamma protein transport protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-27
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 43  IRLPGVRSRRNSKFSAVNAVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEI 102
           IR     + R S      A+++ ++   S+        P EES + +        +GAEI
Sbjct: 37  IRTMTTSNLRKSACFVAKAIEQRRDTAGSESESEATPSPAEESGSGEDKEVEISAIGAEI 96

Query: 103 QEALKQRKVEKE----GDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVN 162
           + A++QRK  +E     + + GVAEE+++IEWPAF+KVLGTTGVV+GVIAGSSVVLLTVN
Sbjct: 97  KAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVVLLTVN 156

Query: 163 ALLAELSDRVFAGKGVQDFFS 180
            LLAELSDRVF G+GVQDFFS
Sbjct: 157 FLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of CmaCh14G017070 vs. NCBI nr
Match: gi|449432698|ref|XP_004134136.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 7.2e-76
Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H SHPHS  TIR P +RS RN KFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CmaCh14G017070 vs. NCBI nr
Match: gi|659076435|ref|XP_008438678.1| (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 3.6e-75
Identity = 160/180 (88.89%), Postives = 167/180 (92.78%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSL-RRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAV 60
           MAVPISL+FP VPSTLT+R ASLFV L R+SS+H SHPHS  TIRLP +RS RN KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQRKVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CmaCh14G017070 vs. NCBI nr
Match: gi|645235523|ref|XP_008224311.1| (PREDICTED: preprotein translocase subunit SECE1 [Prunus mume])

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-29
Identity = 97/190 (51.05%), Postives = 120/190 (63.16%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MA+ +S++FP   + L    A    S  R     +  HS    +     +   SK S + 
Sbjct: 1   MALRMSVQFPITSAFLLSAKAGHVNSSVRLKPPCACNHSVSQFQPRRPLTDTRSKQSLLK 60

Query: 61  AVQESQENTES--DGVEVQ----AGPPTEES-----KTADQPAESGENLGAEIQEALKQR 120
           AV ESQ N+ES  + V  Q    A    +ES       A QP E  E LG EI+EA+++R
Sbjct: 61  AVDESQANSESGPESVSTQQKESASTQQKESAGDGESAASQPVELSE-LGKEIKEAMQKR 120

Query: 121 KVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVF 180
           K EKEGD + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SDRVF
Sbjct: 121 KEEKEGDFLSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDRVF 180

[Close]

BLAST of CmaCh14G017070 vs. NCBI nr
Match: gi|596288401|ref|XP_007225931.1| (hypothetical protein PRUPE_ppa012169mg [Prunus persica])

HSP 1 Score: 136.0 bits (341), Expect = 6.6e-29
Identity = 92/182 (50.55%), Postives = 116/182 (63.74%), Query Frame = 1


Query: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60
           MA+ +S++FP  P+ L         S  R     +  HS    +     +   SK S + 
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQSLLK 60

Query: 61  AVQESQENTESDGVEV---QAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDL 120
           AV ESQ N+ES    V   Q     +    A QP E  E LG EI+EA+++RK EK+GD 
Sbjct: 61  AVDESQANSESGPESVSTQQKESAGDGESAASQPVELSE-LGKEIKEAMQKRKEEKDGDF 120

Query: 121 IGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDF 180
           + GVA+E+++IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKGVQDF
Sbjct: 121 LSGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKGVQDF 180

[Close]

BLAST of CmaCh14G017070 vs. NCBI nr
Match: gi|802581294|ref|XP_012069638.1| (PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas])

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-28
Identity = 75/119 (63.03%), Postives = 98/119 (82.35%), Query Frame = 1


Query: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEA-LKQRKVEKEGDLIG 120
           AV ESQE+TES+  +        E++++++ +     LGAEI++A L+++K EK+GDL+ 
Sbjct: 60  AVGESQESTESEAAK--------EAQSSNESSGEVSELGAEIKKAMLERKKEEKQGDLLS 119

Query: 121 GVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 179
           GVAEE+Q+IEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDR+FAG+GVQDFF
Sbjct: 120 GVAEEVQEIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRIFAGRGVQDFF 170

The following BLAST results are available for this feature:

BLAST of CmaCh14G017070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SECE1_ARATH	4.0e-26	50.35	Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana GN=SECE1 PE=1 SV=1	[more]

BLAST of CmaCh14G017070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5J0_CUCSA	5.1e-76	88.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G146680 PE=4 SV=1	[more]
M5Y5G6_PRUPE	4.6e-29	50.55	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012169mg PE=4 SV=1	[more]
A0A067L6Q9_JATCU	3.0e-28	63.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02178 PE=4 SV=1	[more]
A0A067G4N7_CITSI	5.7e-27	48.31	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030842mg PE=4 SV=1	[more]
V4RGX3_9ROSI	5.7e-27	48.31	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006055mg PE=4 SV=1	[more]

BLAST of CmaCh14G017070 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14870.1	2.3e-27	50.35	secE/sec61-gamma protein transport protein	[more]

BLAST of CmaCh14G017070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432698\|ref\|XP_004134136.1\|	7.2e-76	88.83	PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus]	[more]
gi\|659076435\|ref\|XP_008438678.1\|	3.6e-75	88.89	PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]	[more]
gi\|645235523\|ref\|XP_008224311.1\|	6.6e-29	51.05	PREDICTED: preprotein translocase subunit SECE1 [Prunus mume]	[more]
gi\|596288401\|ref\|XP_007225931.1\|	6.6e-29	50.55	hypothetical protein PRUPE_ppa012169mg [Prunus persica]	[more]
gi\|802581294\|ref\|XP_012069638.1\|	4.3e-28	63.03	PREDICTED: preprotein translocase subunit SECE1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001901	Translocase_SecE/Sec61-g
IPR005807	SecE_bac

Vocabulary: **Biological Process**
Term	Definition
GO:0006605	protein targeting
GO:0006886	intracellular protein transport
GO:0009306	protein secretion

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0006605	protein targeting
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G017070.1	CmaCh14G017070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 118..164 score: 1.
IPR005807	SecE subunit of protein translocation complex	TIGRFAMs	TIGR00964	TIGR00964	coord: 118..164 score: 1.
None	No IPR available	GENE3D	G3DSA:1.20.5.1030		coord: 118..166 score: 6.
None	No IPR available	PANTHER	PTHR37240	FAMILY NOT NAMED	coord: 1..178 score: 6.8
None	No IPR available	PANTHER	PTHR37240:SF1	PREPROTEIN TRANSLOCASE SUBUNIT SECE1	coord: 1..178 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G017070	Cucsa.254300	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G017070	Cla021626	Watermelon (97103) v1	cmawmB242
CmaCh14G017070	Csa3G146680	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G017070	MELO3C006532	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G017070	CSPI03G13130	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G017070	CmoCh14G017500	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G017070	Lsi05G016040	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G017070	Cp4.1LG03g10590	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G017070	MELO3C006532.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G017070	CsaV3_3G013300	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G017070	Cla97C05G086350	Watermelon (97103) v2	cmawmbB263
CmaCh14G017070	Bhi01G000585	Wax gourd	cmawgoB0328
CmaCh14G017070	CsGy3G013280	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G017070	Carg23521	Silver-seed gourd	carcmaB1174

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G017070	Watermelon (97103) v2	cmawmbB266
CmaCh14G017070	Watermelon (97103) v2	cmawmbB280
CmaCh14G017070	Wax gourd	cmawgoB0312
CmaCh14G017070	Cucurbita maxima (Rimu)	cmacmaB249
CmaCh14G017070	Cucurbita maxima (Rimu)	cmacmaB284
CmaCh14G017070	Cucurbita moschata (Rifu)	cmacmoB251
CmaCh14G017070	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G017070	Cucurbita moschata (Rifu)	cmacmoB279
CmaCh14G017070	Watermelon (Charleston Gray)	cmawcgB215
CmaCh14G017070	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G017070	Watermelon (97103) v1	cmawmB250
CmaCh14G017070	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G017070	Bottle gourd (USVL1VR-Ls)	cmalsiB225
CmaCh14G017070	Silver-seed gourd	carcmaB0090
CmaCh14G017070	Silver-seed gourd	carcmaB0453
CmaCh14G017070	Silver-seed gourd	carcmaB0847