CsaV3_2G018150 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G018150
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein MKS1-like
Location	chr2 : 15125307 .. 15126824 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATATATATATATATTAGAAATTTAGGGTTTCCATCTTCCATTTTATGAAGTCAATAAATAAAAAGTCAAACAAATAATATTTTTGTCACAAAACTATATTACAAAAAATAATAATAATCATAATAATGAAAGAAAATTAAAAAAAGGGTTATTTATTTAATTCCCCCAACCACATTGCTTCTCAACTCTCTCCTCTCCTCTCCTCTCCTCCAATTATTACAAACAAAACCCCCAAAATTAACCCAATTTTCCATTTCTCCTCCCCCGGATCCTCACGTCCTCCGATCCGATTCCCCGCCAGATCCGTCATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAGCTAAGTTCATCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTAAACTATTAATCTCCATTGCCAATGTTCTTCAAAAGAGGAATCTTGGGTTTTTTTTTTCTTCTTCTTACTTTTGTAAAGTAGGTAATTGTAATTTGTATAACATTTTTCCATTTTGGCAATTCATTAATTACCCTAAAAAGATGTAGTTTTTGTTACAAAAAAATGTAGCTCTTCTTCTCCCCATTTTTTCCCCCTTCATGTTATAAACAAAATAAATACCATTTTTAACACTTAAATGTGTATCCTAAAGAAAACAATTCATTATGTTTTTATTATTAATTAGGCGATGAGATTTAAGTTTGAGTGATTGTTAATTGCAACCATATGAATTAGATTTTTCTTTTGTGTGTAAAATGTTAAGTCTTTTCTTTGTGTACAATTGTTGACTTTTCAACCTAAATTACCCTTTCTTCTTTATCATTTAATTTTTGTATTATGATATCATTATTATTCCTATATTATTATATACGCTAACGTAACTTCCTTTTAATTTCTTTTATAAATATCCTTCTTATTACCTTTTCT

mRNA sequence

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

Coding sequence (CDS)

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

Protein sequence

MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHELSPHWASPSALFSTPLISPISSPNIFNNLFDI

Homology

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BLAST of CsaV3_2G018150 vs. NCBI nr
Match: XP_011649396.1 (PREDICTED: protein MKS1-like [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_2G302100 [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

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BLAST of CsaV3_2G018150 vs. NCBI nr
Match: XP_008460908.1 (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 8.3e-91
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPP XXXXXXXXXXXXXX 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHXXXXXXXXXXXXXXX 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of CsaV3_2G018150 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77
Identity = 158/212 (74.53%), Postives = 166/212 (78.30%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

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BLAST of CsaV3_2G018150 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 157/212 (74.06%), Postives = 166/212 (78.30%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNP G SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSST-AVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SST + TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

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BLAST of CsaV3_2G018150 vs. NCBI nr
Match: XP_023007245.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 153/212 (72.17%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSS-TAVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS ++  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RS  EREI+VSDMMDL EV VELGQ P              +G+FSP IEPQSF+YSL H
Sbjct: 121 RS--EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 210

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BLAST of CsaV3_2G018150 vs. TAIR10
Match: AT3G18690.1 (MAP kinase substrate 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-18
Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXX 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP        XXXXXXX
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPP----KHPAXXXXXXX 60

Query: 61  XGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
           X       P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSP 167
           E ASPR  +E   R+  V     + E +   G  P              TG FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171

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BLAST of CsaV3_2G018150 vs. TAIR10
Match: AT1G21326.1 (VQ motif-containing protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 64/146 (43.84%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PP XXXXXXXXXXXXXX     P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTGQSS---------------------TAVTDGDLSPA 133
           IY +SP++IH   NNFM++VQRLTG++S                        + G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSXXXXXXXXXXXXXXPKDASTMVDTSHGLISPA 124

Query: 134 ARLATIEKASPRSEREREINVSDMMD 135
           AR A  EKA+  +E    +     MD
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMD 148

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BLAST of CsaV3_2G018150 vs. TAIR10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PP XXXXXXXXXXXXXX       P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQS-------------------STAV--TDGDLSPAARLATIEKAS 135
              NNFM++VQRLTGQ+                   ST V  + G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

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BLAST of CsaV3_2G018150 vs. TAIR10
Match: AT1G68450.1 (VQ motif-containing protein)

HSP 1 Score: 42.4 bits (98), Expect = 4.2e-04
Identity = 38/111 (34.23%), Postives = 49/111 (44.14%), Query Frame = 0


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIHV 80
           ++ G RP  L+++ ES  IKK                   P     P+IIY  SPKVIH 
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPR----------PHGRASPVIIYAHSPKVIHT 67

Query: 81  AENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSD 132
              +FM++VQRLTG          L    R  T E +S  S    E+NV D
Sbjct: 68  RAEDFMALVQRLTG----------LDEIIRRNTSESSS--SVVTEEVNVGD 96

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BLAST of CsaV3_2G018150 vs. Swiss-Prot
Match: sp|Q8LGD5|MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXX 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP        XXXXXXX
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPP----KHPAXXXXXXX 60

Query: 61  XGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
           X       P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSP 167
           E ASPR  +E   R+  V     + E +   G  P              TG FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171

[Close]

BLAST of CsaV3_2G018150 vs. Swiss-Prot
Match: sp|F4HWF9|NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PP XXXXXXXXXXXXXX       P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQS-------------------STAV--TDGDLSPAARLATIEKAS 135
              NNFM++VQRLTGQ+                   ST V  + G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

[Close]

BLAST of CsaV3_2G018150 vs. TrEMBL
Match: tr|A0A0A0LK21|A0A0A0LK21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.6e-93
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

[Close]

BLAST of CsaV3_2G018150 vs. TrEMBL
Match: tr|A0A1S3CD17|A0A1S3CD17_CUCME (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.5e-91
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPP XXXXXXXXXXXXXX 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHXXXXXXXXXXXXXXX 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of CsaV3_2G018150 vs. TrEMBL
Match: tr|W0TUF0|W0TUF0_ACAMN (Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.6e-36
Identity = 100/216 (46.30%), Postives = 129/216 (59.72%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGY    SP    ++E+ LQGPRP  L VS+ES KI+KPP                 
Sbjct: 1   MNPPGYPTGDSPPPQSRRELALQGPRPSPLSVSKESHKIRKPP----LPRHAYRPAAVPC 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
             + PQP+IIY +SPKVIHV  ++FM VVQRLTG SS A   GD+SPAARLA+IEK SP 
Sbjct: 61  QQEQPQPVIIYSVSPKVIHVPVDDFMKVVQRLTGPSSPASRSGDVSPAARLASIEKTSP- 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SE+ER  N  +MMDL E  VE+ Q                +  FSP  +P++ S+   H+
Sbjct: 121 SEKERFQNGDEMMDLLE-GVEVSQFHGILSPAPGTLPGISSEIFSPTTDPETLSW--LHD 180

Query: 181 LSPHWA-----SPSALFSTPLISPISSPNIFNNLFD 212
           +SP W+     SPS LFST + SP+ SP++F ++FD
Sbjct: 181 MSPFWSSSFAGSPSGLFSTSIASPLPSPDVF-SIFD 207

[Close]

BLAST of CsaV3_2G018150 vs. TrEMBL
Match: tr|A0A1S2YG04|A0A1S2YG04_CICAR (protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.0e-33
Identity = 103/220 (46.82%), Postives = 135/220 (61.36%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MN P + + G+ T   KKE+Q+QG RPP LRVS+ES  I+KPP        XXXXXXX G
Sbjct: 1   MNLPDFHSGGTSTPSPKKELQIQGTRPPPLRVSKESHTIRKPP-----LPPXXXXXXXAG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSS---TAVTDGDLSPAARLATIEKA 120
            SQ  QPLIIY +SPKV+HV  ++FM VVQRLTG S+   T    G +SPAARLA+IE+ 
Sbjct: 61  ASQHRQPLIIYSVSPKVLHVTVSDFMDVVQRLTGPSAGEETPQQSGAISPAARLASIERT 120

Query: 121 SPRSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSL 180
           SP +ERE+  N+ D +      +E+GQ P               G+FSP  E Q+ S+  
Sbjct: 121 SP-TEREKAQNIDDDLTWLLDGIEMGQFPGILSPAPATLPPISQGFFSPMTETQTTSF-- 180

Query: 181 FHELSPHW------ASPSALFSTPLISPISSPNIFNNLFD 212
           +H+ SP W      ASPS L S  ++SP+ SP++F N+FD
Sbjct: 181 WHDTSPLWYGNSFVASPSGLLSATVVSPLPSPDLF-NIFD 211

[Close]

BLAST of CsaV3_2G018150 vs. TrEMBL
Match: tr|A0A2P5E9J1|A0A2P5E9J1_9ROSA (VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32
Identity = 99/198 (50.00%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIHV 80
           QLQGPRP  L+V++ES KI+KPPP      X           Q  +P+IIY +SPKVIH 
Sbjct: 26  QLQGPRPTPLKVNKESHKIRKPPPHPPLRQXHPPPAGDYHQRQ--EPVIIYTVSPKVIHA 85

Query: 81  AENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSDMMDLAEVSV 140
           + ++FMSVVQRLTG S      G LSPAARLA+IEK SP SERER     D++ + E  V
Sbjct: 86  SVSDFMSVVQRLTGPSPVGSPSGALSPAARLASIEKTSP-SERERP-GGGDLLGMVE-GV 145

Query: 141 ELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHELSPHW------ASPSALFST 200
           ELGQ P               G+FSP  +PQ+   S+ H+LSP W       SPSAL S 
Sbjct: 146 ELGQFPGILSPAPATLPPIPAGFFSPVSDPQTL--SMLHDLSPFWHSNSFMPSPSALLSA 205

Query: 201 PLISPI-SSPNIFNNLFD 212
           PLISP  SS +IFNNLFD
Sbjct: 206 PLISPSPSSSDIFNNLFD 216

The following BLAST results are available for this feature:

BLAST of CsaV3_2G018150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649396.1	1.2e-92	100.00	PREDICTED: protein MKS1-like [Cucumis sativus] >KGN62143.1 hypothetical protein ...	[more]
XP_008460908.1	8.3e-91	98.58	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
XP_022947651.1	4.0e-77	74.53	protein MKS1-like [Cucurbita moschata]	[more]
XP_023533977.1	2.0e-76	74.06	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007245.1	1.6e-73	72.17	protein MKS1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_2G018150 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	1.8e-18	41.71	MAP kinase substrate 1	[more]
AT1G21326.1	3.3e-09	43.84	VQ motif-containing protein	[more]
AT1G21320.1	1.8e-07	44.12	nucleotide binding;nucleic acid binding	[more]
AT1G68450.1	4.2e-04	34.23	VQ motif-containing protein	[more]

BLAST of CsaV3_2G018150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGD5\|MKS1_ARATH	3.2e-17	41.71	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
sp\|F4HWF9\|NSRB_ARATH	3.3e-06	44.12	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CsaV3_2G018150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LK21\|A0A0A0LK21_CUCSA	7.6e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1	[more]
tr\|A0A1S3CD17\|A0A1S3CD17_CUCME	5.5e-91	98.58	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
tr\|W0TUF0\|W0TUF0_ACAMN	6.6e-36	46.30	Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1	[more]
tr\|A0A1S2YG04\|A0A1S2YG04_CICAR	4.0e-33	46.82	protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1	[more]
tr\|A0A2P5E9J1\|A0A2P5E9J1_9ROSA	2.0e-32	50.00	VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G018150.1	CsaV3_2G018150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 7.2E-11 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 15..211
None	No IPR available	PANTHER	PTHR33143:SF26	F16F4.1 PROTEIN	coord: 15..211

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G018150	CSPI02G15600	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G018150	Cucsa.249990	Cucumber (Gy14) v1	cgycucB380
CsaV3_2G018150	CmaCh20G010680	Cucurbita maxima (Rimu)	cmacucB0652
CsaV3_2G018150	CmaCh02G006220	Cucurbita maxima (Rimu)	cmacucB0695
CsaV3_2G018150	CmoCh20G010760	Cucurbita moschata (Rifu)	cmocucB0638
CsaV3_2G018150	CmoCh02G006260	Cucurbita moschata (Rifu)	cmocucB0680
CsaV3_2G018150	Cp4.1LG16g00810	Cucurbita pepo (Zucchini)	cpecucB0335
CsaV3_2G018150	Cp4.1LG05g10550	Cucurbita pepo (Zucchini)	cpecucB0887
CsaV3_2G018150	CsGy2G015570	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G018150	Carg24324	Silver-seed gourd	carcucB0756
CsaV3_2G018150	Carg11687	Silver-seed gourd	carcucB1102
CsaV3_2G018150	Cla007798	Watermelon (97103) v1	cucwmB154
CsaV3_2G018150	MELO3C023257	Melon (DHL92) v3.5.1	cucmeB104
CsaV3_2G018150	ClCG02G000620	Watermelon (Charleston Gray)	cucwcgB139
CsaV3_2G018150	Lsi10G007140	Bottle gourd (USVL1VR-Ls)	cuclsiB106
CsaV3_2G018150	MELO3C023257.2	Melon (DHL92) v3.6.1	cucmedB097
CsaV3_2G018150	Cla97C02G026890	Watermelon (97103) v2	cucwmbB124
CsaV3_2G018150	Bhi10G001326	Wax gourd	cucwgoB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G018150	Cucurbita moschata (Rifu)	cmocucB0642