CmoCh20G010760 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G010760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Map kinase substrate
Location	Cmo_Chr20 : 9958160 .. 9958813 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCGCCGGGATATCCCGCCGGCGGCAGCCCCAGAAAGAAGGAGATCCAGCTACAGGGTCCTCGCCCGCCGCAACTCCGCGTCAGTCAAGATTCCCGCAAAATCAAGAAGCCGCCGCCACACCCTCAGCCGATTCCCCCAGCCGAACGCCCACCTCTCCCACCCGGCGCCGGCGCCACACAATGGCCTCAGCCACTCATCATCTACGACATCTCCCCTAAAGTCATCCACGTCCCAGAGAACAACTTCATGTCCGTCGTGCAACGACTCACTGGACTCTCTTCCTCCGGCGCCTCCGCCCCCGACGGCGATCTCTCCCCAGCGGCGAGGCTGGCCGCAATCGAGAAGGCCAGTCCCCGACCGGAAAGAGAAAGAGAAAGAGAAATCGACGTTAGCGAGATGATGGATTTGGGGGAGATTTCGGTGGAGTTATGGCAAACCCCCGGAATCCTATCTCCGGCTCCGGCGAGTCTTGCTCCGATTCCGACAGGTTTTTTCTCGCCGGCGACTGAGCTTCCAAATTTTCCGTATTCGTTAATTCAGGAGCTGAGCCCTCATTGGCCGAGCCCTTCTGCTCTGTTTTCAGCTCCTCTGGTTTCCCCAATTTCTTCACCAAATCTTTTCAACCATCTCTTTGATTTTTCTAGCTAA

mRNA sequence

ATGAACCCGCCGGGATATCCCGCCGGCGGCAGCCCCAGAAAGAAGGAGATCCAGCTACAGGGTCCTCGCCCGCCGCAACTCCGCGTCAGTCAAGATTCCCGCAAAATCAAGAAGCCGCCGCCACACCCTCAGCCGATTCCCCCAGCCGAACGCCCACCTCTCCCACCCGGCGCCGGCGCCACACAATGGCCTCAGCCACTCATCATCTACGACATCTCCCCTAAAGTCATCCACGTCCCAGAGAACAACTTCATGTCCGTCGTGCAACGACTCACTGGACTCTCTTCCTCCGGCGCCTCCGCCCCCGACGGCGATCTCTCCCCAGCGGCGAGGCTGGCCGCAATCGAGAAGGCCAGTCCCCGACCGGAAAGAGAAAGAGAAAGAGAAATCGACGTTAGCGAGATGATGGATTTGGGGGAGATTTCGGTGGAGTTATGGCAAACCCCCGGAATCCTATCTCCGGCTCCGGCGAGTCTTGCTCCGATTCCGACAGGTTTTTTCTCGCCGGCGACTGAGCTTCCAAATTTTCCGTATTCGTTAATTCAGGAGCTGAGCCCTCATTGGCCGAGCCCTTCTGCTCTGTTTTCAGCTCCTCTGGTTTCCCCAATTTCTTCACCAAATCTTTTCAACCATCTCTTTGATTTTTCTAGCTAA

Coding sequence (CDS)

ATGAACCCGCCGGGATATCCCGCCGGCGGCAGCCCCAGAAAGAAGGAGATCCAGCTACAGGGTCCTCGCCCGCCGCAACTCCGCGTCAGTCAAGATTCCCGCAAAATCAAGAAGCCGCCGCCACACCCTCAGCCGATTCCCCCAGCCGAACGCCCACCTCTCCCACCCGGCGCCGGCGCCACACAATGGCCTCAGCCACTCATCATCTACGACATCTCCCCTAAAGTCATCCACGTCCCAGAGAACAACTTCATGTCCGTCGTGCAACGACTCACTGGACTCTCTTCCTCCGGCGCCTCCGCCCCCGACGGCGATCTCTCCCCAGCGGCGAGGCTGGCCGCAATCGAGAAGGCCAGTCCCCGACCGGAAAGAGAAAGAGAAAGAGAAATCGACGTTAGCGAGATGATGGATTTGGGGGAGATTTCGGTGGAGTTATGGCAAACCCCCGGAATCCTATCTCCGGCTCCGGCGAGTCTTGCTCCGATTCCGACAGGTTTTTTCTCGCCGGCGACTGAGCTTCCAAATTTTCCGTATTCGTTAATTCAGGAGCTGAGCCCTCATTGGCCGAGCCCTTCTGCTCTGTTTTCAGCTCCTCTGGTTTCCCCAATTTCTTCACCAAATCTTTTCAACCATCTCTTTGATTTTTCTAGCTAA

Homology

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BLAST of CmoCh20G010760 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 4.4e-27
Identity = 93/231 (40.26%), Postives = 131/231 (56.71%), Query Frame = 1


Query: 1   MNPPGYPAGGSP-----RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPP-- 60
           M+P  Y AGG+P     +K+++Q+ GPRP  L V +DS KIKKPP HP P P  ++PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPY 60

Query: 61  LPPGAGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSG--ASAPDGDLSPAAR 120
           +P         +P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR
Sbjct: 61  IP--------REPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAAR 120

Query: 121 LAAIEKASPRPERE---REREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFS 180
           LA+ E ASPR  +E   R+  ++++  M+  E +      PGILSP+PA L    TG FS
Sbjct: 121 LASTENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFS 180

Query: 181 PATE-----LPNFPYSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFD 215
           P         P  P  L        P  S  F++ + SP +  + F+H++D
Sbjct: 181 PMYHQGGMFSPAIPLGLFSPAGFMSPFRSPGFTSLVASP-TFADFFSHIWD 220

[Close]

BLAST of CmoCh20G010760 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 1


Query: 21  GPRPPQLRVSQDSRKI-KKPP---PHPQPIPPAERPPLPPGAGATQWPQPLIIYDISPKV 80
           GP+P  L+V  DS KI KKPP   PHPQP PP      P  +     P P+ IY ++P++
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPP--PGPVNIYTVTPRI 72

Query: 81  IHVPENNFMSVVQRLTGLSSSGASAPDGDLS 108
           IH   NNFM++VQRLTG +S+  ++     S
Sbjct: 73  IHTHPNNFMTLVQRLTGQTSTSTTSSSSSSS 101

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BLAST of CmoCh20G010760 vs. TrEMBL
Match: A0A0A0LK21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.2e-82
Identity = 170/217 (78.34%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 1   MNPPGYPAGGSP---RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPG 60
           MNPPGY A GSP   RKKEIQLQGPRPPQLRVSQ+SRKIKKPPPHPQP+P   RPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEK 120
              +QWPQPLIIYDISPKVIHV ENNFMSVVQRLTG SS+  +  DGDLSPAARLA IEK
Sbjct: 61  P--SQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVT--DGDLSPAARLATIEK 120

Query: 121 ASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFP 180
           ASPR   EREREI+VS+MMDL E+SVEL Q PGILSPAP +LAPIPTG+FSPA E  +F 
Sbjct: 121 ASPRS--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFS 180

Query: 181 YSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFD 215
           YSL  ELSPHW SPSALFS PL+SPISSPN+FN+LFD
Sbjct: 181 YSLFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of CmoCh20G010760 vs. TrEMBL
Match: G7LD80_MEDTR (MKS1-like protein OS=Medicago truncatula GN=MTR_8g093335 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 117/227 (51.54%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MNPPGYPAG-----GSPRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLP 60
           MNPP +P+G      SPR+ E+Q+QG RPP LRVS++SR I+KPP     +PPA      
Sbjct: 1   MNPPEFPSGVGTSTPSPRR-ELQIQGTRPPPLRVSKESRTIRKPP-----LPPAAAHHHQ 60

Query: 61  PGAGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAP--DGDLSPAARLA 120
           P AGA+Q  QPLIIY +SPKV+H+P ++FM VVQRLTG  S+G  AP   G +SPAARLA
Sbjct: 61  P-AGASQHRQPLIIYSVSPKVLHIPVSDFMDVVQRLTG-PSAGEEAPQQSGAVSPAARLA 120

Query: 121 AIEKASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATEL 180
           +IE+ SP  ERER ++    ++  L E  VE+ Q PGILSPAPA+L PI  GFFSP  E 
Sbjct: 121 SIERTSP-TERERIQQTVDEDLTWLLE-GVEMGQFPGILSPAPATLPPISQGFFSPMNEP 180

Query: 181 PNFPYSLIQELSPHW------PSPSALFSAPLVSPISSPNLFNHLFD 215
              P+    + SP W       SPS L SA +VSP+ SP+LF+ +FD
Sbjct: 181 QTTPF--WHDTSPFWYGNSFVASPSGLLSATVVSPLPSPDLFS-IFD 214

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BLAST of CmoCh20G010760 vs. TrEMBL
Match: K7KV66_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G151400 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-36
Identity = 119/227 (52.42%), Postives = 139/227 (61.23%), Query Frame = 1


Query: 1   MNPPGYPAGGSPR-KKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPGAG 60
           MNPP  P GG+P  KKE+QLQGPRPP L+VS++S KIKKPPPHP        P  PP   
Sbjct: 1   MNPPEIPFGGAPLPKKELQLQGPRPPPLKVSKESHKIKKPPPHPAH-HHHNYPHAPPDQN 60

Query: 61  ATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPD--GDLSPAARLAAIEK 120
             Q  +P+IIY +SPKVIHV   +FM VVQRLTG +S G   P   GD+SPAARLA+IEK
Sbjct: 61  LQQQREPVIIYSVSPKVIHVTPGDFMDVVQRLTG-ASIGEEPPSGRGDVSPAARLASIEK 120

Query: 121 ASPRPERERER---EIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELP 180
            SP  ERERER    ID +    LGE  VE+ Q PGIL+P P +L PIP   FSP  E  
Sbjct: 121 TSP-SERERERVLHNIDDNIAWMLGE-GVEVGQFPGILTPEPGTLPPIPAEVFSPVREAQ 180

Query: 181 NFPYSLIQELSP-HW------PSPSALFSAPLVSPISSPNLFNHLFD 215
               S   + SP +W       SPS   S  + SP  SPNLF+ LFD
Sbjct: 181 T-AASYWNDFSPSYWSASSFLASPSGFLSVTVASPQPSPNLFS-LFD 221

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BLAST of CmoCh20G010760 vs. TrEMBL
Match: B9RU13_RICCO (Protein MKS1, putative OS=Ricinus communis GN=RCOM_1460090 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 107/216 (49.54%), Postives = 133/216 (61.57%), Query Frame = 1


Query: 12  PRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPGAGATQWPQPLIIYD 71
           P+KK+ Q+QGPRP  L+V  DS KIKKPP  P P                   QP+IIY 
Sbjct: 31  PQKKQNQIQGPRPTALKVHHDSHKIKKPPLPPPP------------------QQPVIIYA 90

Query: 72  ISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEKASPRPEREREREID 131
           +SPKVIH+ E+ FM+VVQRLTGLSS   S+ DG +SPAARLAA EKASPR         D
Sbjct: 91  VSPKVIHIKESEFMTVVQRLTGLSSGDFSSGDGQVSPAARLAATEKASPRERNPNNSNPD 150

Query: 132 ----VSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFPYSLIQELSPH 191
                +++M + E SVE+ Q PGILSPAPA L P+P GFFSP T+ PNF   ++   SP+
Sbjct: 151 DGGSDNDLMAMIE-SVEIGQIPGILSPAPAMLPPVPPGFFSPITD-PNFFNDVMLSSSPY 210

Query: 192 WP--------SPSALFSAP-LVSPISSPNLFNHLFD 215
                     SPS+L SA  ++SP+ SP+LFN L D
Sbjct: 211 GNNYGSNFILSPSSLLSASNILSPLPSPDLFNLLMD 226

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BLAST of CmoCh20G010760 vs. TrEMBL
Match: W0TUF0_ACAMN (Map kinase substrate OS=Acacia mangium PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-35
Identity = 110/222 (49.55%), Postives = 140/222 (63.06%), Query Frame = 1


Query: 1   MNPPGYPAGGSP---RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPG 60
           MNPPGYP G SP    ++E+ LQGPRP  L VS++S KI+KPP       PA  P     
Sbjct: 1   MNPPGYPTGDSPPPQSRRELALQGPRPSPLSVSKESHKIRKPPLPRHAYRPAAVPC---- 60

Query: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEK 120
               + PQP+IIY +SPKVIHVP ++FM VVQRLTG SS  + +  GD+SPAARLA+IEK
Sbjct: 61  --QQEQPQPVIIYSVSPKVIHVPVDDFMKVVQRLTGPSSPASRS--GDVSPAARLASIEK 120

Query: 121 ASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFP 180
            SP    E+ER  +  EMMDL E  VE+ Q  GILSPAP +L  I +  FSP T+     
Sbjct: 121 TSP---SEKERFQNGDEMMDLLE-GVEVSQFHGILSPAPGTLPGISSEIFSPTTDPETL- 180

Query: 181 YSLIQELSPHWP-----SPSALFSAPLVSPISSPNLFNHLFD 215
            S + ++SP W      SPS LFS  + SP+ SP++F+ +FD
Sbjct: 181 -SWLHDMSPFWSSSFAGSPSGLFSTSIASPLPSPDVFS-IFD 207

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BLAST of CmoCh20G010760 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 93/231 (40.26%), Postives = 131/231 (56.71%), Query Frame = 1


Query: 1   MNPPGYPAGGSP-----RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPP-- 60
           M+P  Y AGG+P     +K+++Q+ GPRP  L V +DS KIKKPP HP P P  ++PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPY 60

Query: 61  LPPGAGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSG--ASAPDGDLSPAAR 120
           +P         +P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR
Sbjct: 61  IP--------REPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAAR 120

Query: 121 LAAIEKASPRPERE---REREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFS 180
           LA+ E ASPR  +E   R+  ++++  M+  E +      PGILSP+PA L    TG FS
Sbjct: 121 LASTENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFS 180

Query: 181 PATE-----LPNFPYSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFD 215
           P         P  P  L        P  S  F++ + SP +  + F+H++D
Sbjct: 181 PMYHQGGMFSPAIPLGLFSPAGFMSPFRSPGFTSLVASP-TFADFFSHIWD 220

[Close]

BLAST of CmoCh20G010760 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 48/104 (46.15%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 11  SPRKKEIQLQGPRPPQLRVSQDSRKI-KKPP---PHPQPIPPAERPPLPPGAGATQWPQP 70
           SPR + I   GPRP  L+V  DS KI KKPP   PHPQP PP      P  +     P P
Sbjct: 5   SPRSRGIL--GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPP--PGP 64

Query: 71  LIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAA 111
           +IIY +SP++IH   NNFM++VQRLTG +S+  ++     S +A
Sbjct: 65  VIIYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSA 104

[Close]

BLAST of CmoCh20G010760 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 1


Query: 21  GPRPPQLRVSQDSRKI-KKPP---PHPQPIPPAERPPLPPGAGATQWPQPLIIYDISPKV 80
           GP+P  L+V  DS KI KKPP   PHPQP PP      P  +     P P+ IY ++P++
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPP--PGPVNIYTVTPRI 72

Query: 81  IHVPENNFMSVVQRLTGLSSSGASAPDGDLS 108
           IH   NNFM++VQRLTG +S+  ++     S
Sbjct: 73  IHTHPNNFMTLVQRLTGQTSTSTTSSSSSSS 101

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BLAST of CmoCh20G010760 vs. NCBI nr
Match: gi|659121968|ref|XP_008460908.1| (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 6.1e-85
Identity = 173/218 (79.36%), Postives = 187/218 (85.78%), Query Frame = 1


Query: 1   MNPPGYPAGGSP---RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPG 60
           MNPPGY A GSP   RKKEIQLQGPRPPQLRVSQ+SRKIKKPPPHPQP+PP  RPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEK 120
              +QWPQPLIIYDISPKVIHV ENNFMSVVQRLTG SS+  +  DGDLSPAARLA IEK
Sbjct: 61  P--SQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVT--DGDLSPAARLATIEK 120

Query: 121 ASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFP 180
           ASPR   EREREI+VS+MMDL E+SVEL Q PGILSPAP +LAPIPTG+FSPA E  +F 
Sbjct: 121 ASPRS--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFS 180

Query: 181 YSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFDF 216
           YSL  ELSPHWPSPSALFS PL+SPISSPN+FN+LFDF
Sbjct: 181 YSLFHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of CmoCh20G010760 vs. NCBI nr
Match: gi|778670197|ref|XP_011649396.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.7e-82
Identity = 170/217 (78.34%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 1   MNPPGYPAGGSP---RKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPG 60
           MNPPGY A GSP   RKKEIQLQGPRPPQLRVSQ+SRKIKKPPPHPQP+P   RPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEK 120
              +QWPQPLIIYDISPKVIHV ENNFMSVVQRLTG SS+  +  DGDLSPAARLA IEK
Sbjct: 61  P--SQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVT--DGDLSPAARLATIEK 120

Query: 121 ASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFP 180
           ASPR   EREREI+VS+MMDL E+SVEL Q PGILSPAP +LAPIPTG+FSPA E  +F 
Sbjct: 121 ASPRS--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFS 180

Query: 181 YSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFD 215
           YSL  ELSPHW SPSALFS PL+SPISSPN+FN+LFD
Sbjct: 181 YSLFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of CmoCh20G010760 vs. NCBI nr
Match: gi|731387859|ref|XP_010649402.1| (PREDICTED: protein MKS1 [Vitis vinifera])

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37
Identity = 115/231 (49.78%), Postives = 144/231 (62.34%), Query Frame = 1


Query: 1   MNPPGYPAGG----SPRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPP 60
           MNPP + + G    SP+++E+Q+QGPRP  L+VS++S KIKKPP  P P      PP P 
Sbjct: 21  MNPPDFFSSGGDGPSPQRRELQIQGPRPSPLKVSKESHKIKKPPTAPLPAHRQTAPPPP- 80

Query: 61  GAGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPD------GDLSPAA 120
                Q  +P+IIY ISPKVIH   N+F+SVVQRLTG  ++  SA D      GDLSPAA
Sbjct: 81  ---ENQNREPVIIYTISPKVIHTTVNDFLSVVQRLTGNYATSPSASDLAASGAGDLSPAA 140

Query: 121 RLAAIEKASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPA 180
           RLA+IEK SP  ER+R     V  +M L E  VE+ Q PGILSPAPA+L PIP GFFSPA
Sbjct: 141 RLASIEKTSPPKERDRGGGGGVG-VMGLVE-GVEVGQIPGILSPAPATLPPIPPGFFSPA 200

Query: 181 TELPNFPYSLIQEL------SPHWPSPSALFSAPLVSPISSPNLFNHLFDF 216
            +      S++Q+L      S    SPS L SAP++SP  SP+  +   DF
Sbjct: 201 PDPQTL--SVLQDLNYFLQGSSFISSPSNLLSAPIISPTLSPDFLSQFLDF 243

[Close]

BLAST of CmoCh20G010760 vs. NCBI nr
Match: gi|922330107|ref|XP_003630243.2| (MKS1-like protein [Medicago truncatula])

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-37
Identity = 117/227 (51.54%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MNPPGYPAG-----GSPRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLP 60
           MNPP +P+G      SPR+ E+Q+QG RPP LRVS++SR I+KPP     +PPA      
Sbjct: 1   MNPPEFPSGVGTSTPSPRR-ELQIQGTRPPPLRVSKESRTIRKPP-----LPPAAAHHHQ 60

Query: 61  PGAGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAP--DGDLSPAARLA 120
           P AGA+Q  QPLIIY +SPKV+H+P ++FM VVQRLTG  S+G  AP   G +SPAARLA
Sbjct: 61  P-AGASQHRQPLIIYSVSPKVLHIPVSDFMDVVQRLTG-PSAGEEAPQQSGAVSPAARLA 120

Query: 121 AIEKASPRPEREREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATEL 180
           +IE+ SP  ERER ++    ++  L E  VE+ Q PGILSPAPA+L PI  GFFSP  E 
Sbjct: 121 SIERTSP-TERERIQQTVDEDLTWLLE-GVEMGQFPGILSPAPATLPPISQGFFSPMNEP 180

Query: 181 PNFPYSLIQELSPHW------PSPSALFSAPLVSPISSPNLFNHLFD 215
              P+    + SP W       SPS L SA +VSP+ SP+LF+ +FD
Sbjct: 181 QTTPF--WHDTSPFWYGNSFVASPSGLLSATVVSPLPSPDLFS-IFD 214

[Close]

BLAST of CmoCh20G010760 vs. NCBI nr
Match: gi|356516343|ref|XP_003526855.1| (PREDICTED: protein MKS1-like [Glycine max])

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 119/227 (52.42%), Postives = 139/227 (61.23%), Query Frame = 1


Query: 1   MNPPGYPAGGSPR-KKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPGAG 60
           MNPP  P GG+P  KKE+QLQGPRPP L+VS++S KIKKPPPHP        P  PP   
Sbjct: 1   MNPPEIPFGGAPLPKKELQLQGPRPPPLKVSKESHKIKKPPPHPAH-HHHNYPHAPPDQN 60

Query: 61  ATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPD--GDLSPAARLAAIEK 120
             Q  +P+IIY +SPKVIHV   +FM VVQRLTG +S G   P   GD+SPAARLA+IEK
Sbjct: 61  LQQQREPVIIYSVSPKVIHVTPGDFMDVVQRLTG-ASIGEEPPSGRGDVSPAARLASIEK 120

Query: 121 ASPRPERERER---EIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELP 180
            SP  ERERER    ID +    LGE  VE+ Q PGIL+P P +L PIP   FSP  E  
Sbjct: 121 TSP-SERERERVLHNIDDNIAWMLGE-GVEVGQFPGILTPEPGTLPPIPAEVFSPVREAQ 180

Query: 181 NFPYSLIQELSP-HW------PSPSALFSAPLVSPISSPNLFNHLFD 215
               S   + SP +W       SPS   S  + SP  SPNLF+ LFD
Sbjct: 181 T-AASYWNDFSPSYWSASSFLASPSGFLSVTVASPQPSPNLFS-LFD 221

The following BLAST results are available for this feature:

BLAST of CmoCh20G010760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MKS1_ARATH	4.4e-27	40.26	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
NSRB_ARATH	2.1e-08	43.96	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1	[more]

BLAST of CmoCh20G010760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK21_CUCSA	1.2e-82	78.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302100 PE=4 SV=1	[more]
G7LD80_MEDTR	1.9e-37	51.54	MKS1-like protein OS=Medicago truncatula GN=MTR_8g093335 PE=2 SV=2	[more]
K7KV66_SOYBN	1.2e-36	52.42	Uncharacterized protein OS=Glycine max GN=GLYMA_06G151400 PE=4 SV=1	[more]
B9RU13_RICCO	1.1e-35	49.54	Protein MKS1, putative OS=Ricinus communis GN=RCOM_1460090 PE=4 SV=1	[more]
W0TUF0_ACAMN	1.4e-35	49.55	Map kinase substrate OS=Acacia mangium PE=2 SV=1	[more]

BLAST of CmoCh20G010760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	2.5e-28	40.26	MAP kinase substrate 1	[more]
AT1G21326.1	2.8e-11	46.15	VQ motif-containing protein	[more]
AT1G21320.1	1.2e-09	43.96	nucleotide binding;nucleic acid binding	[more]

BLAST of CmoCh20G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121968\|ref\|XP_008460908.1\|	6.1e-85	79.36	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
gi\|778670197\|ref\|XP_011649396.1\|	1.7e-82	78.34	PREDICTED: protein MKS1-like [Cucumis sativus]	[more]
gi\|731387859\|ref\|XP_010649402.1\|	2.1e-37	49.78	PREDICTED: protein MKS1 [Vitis vinifera]	[more]
gi\|922330107\|ref\|XP_003630243.2\|	2.8e-37	51.54	MKS1-like protein [Medicago truncatula]	[more]
gi\|356516343\|ref\|XP_003526855.1\|	1.8e-36	52.42	PREDICTED: protein MKS1-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G010760.1	CmoCh20G010760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 72..96 score: 1.
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 12..215 score: 3.7
None	No IPR available	PANTHER	PTHR33143:SF5	SUBFAMILY NOT NAMED	coord: 12..215 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G010760	Cucsa.249990	Cucumber (Gy14) v1	cgycmoB0696
CmoCh20G010760	CmaCh20G010680	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G010760	CmaCh02G006220	Cucurbita maxima (Rimu)	cmacmoB616
CmoCh20G010760	Cla007798	Watermelon (97103) v1	cmowmB521
CmoCh20G010760	Csa2G302100	Cucumber (Chinese Long) v2	cmocuB532
CmoCh20G010760	MELO3C023257	Melon (DHL92) v3.5.1	cmomeB486
CmoCh20G010760	ClCG02G000620	Watermelon (Charleston Gray)	cmowcgB480
CmoCh20G010760	CSPI02G15600	Wild cucumber (PI 183967)	cmocpiB537
CmoCh20G010760	Lsi10G007140	Bottle gourd (USVL1VR-Ls)	cmolsiB492
CmoCh20G010760	Cp4.1LG16g00810	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G010760	Cp4.1LG05g10550	Cucurbita pepo (Zucchini)	cmocpeB530
CmoCh20G010760	MELO3C023257.2	Melon (DHL92) v3.6.1	cmomedB562
CmoCh20G010760	CsaV3_2G018150	Cucumber (Chinese Long) v3	cmocucB0638
CmoCh20G010760	Cla97C02G026890	Watermelon (97103) v2	cmowmbB546
CmoCh20G010760	Bhi10G001326	Wax gourd	cmowgoB0692
CmoCh20G010760	CsGy2G015570	Cucumber (Gy14) v2	cgybcmoB210
CmoCh20G010760	Carg11687	Silver-seed gourd	carcmoB1419
CmoCh20G010760	Carg24324	Silver-seed gourd	carcmoB0977

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh20G010760	CmoCh02G006260	Cucurbita moschata (Rifu)	cmocmoB414

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G010760	Cucumber (Chinese Long) v3	cmocucB0642
CmoCh20G010760	Melon (DHL92) v3.5.1	cmomeB492
CmoCh20G010760	Cucumber (Gy14) v2	cgybcmoB214