ClCG02G000620 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000620
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	VQ motif-containing family protein
Location	CG_Chr02 : 649893 .. 650543 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAG

mRNA sequence

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAG

Coding sequence (CDS)

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACCACCCCAAGAAAGAAGGAGATCCAGCTACAAGGCCCCCGCCCGCCGCAACTCCGCGTCAGTCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGGTTCCCCCCGGCGGCCGGCCTCCTCTCCCGCCGGGCCCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTCGCCGAGAACAACTTCATGTCCGTCGTCCAGCGCCTCACTGGGCTGTCCTCCGCCGCCGCCACCGACGGCGACCTGTCCCCGGCAGCAAGGCTGGCCACAATCGAGAAAGCCAGTCCCCGATCCGAAAGAGAAAGAGAAAGAGAAAGAGAAATCAACGTTAGCGACATGATGGATTTGGCGGAGGTTCCGGTGGAATTAGGGCAAATTCCCGGAATCCTGTCACCAGCTCCGGCAACTCTGGCTCCGATTCCGACAGGGTATTTCTCGCCGGCGATTGAACATCAGAGCTTGGCGTATTCTTTGATTCACGAGCTGAGTCCTCATTGGCCAAGCCCTTCTGCTCTGTTTTCAGCTCCTCTTGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTTTAG

Protein sequence

MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF

Homology

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BLAST of ClCG02G000620 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33
Identity = 97/218 (44.50%), Postives = 126/218 (57.80%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG+SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           E ASPR  +E   R+   EIN + M + AE     G  PGILSP+PA L    TG FSP 
Sbjct: 121 ENASPRGGKEPAARDETVEINTA-MEEAAEFG---GYAPGILSPSPALLPTASTGIFSP- 180

Query: 181 IEHQSLAYSLIHELSPHWPS-PSALFS-APLVSPISSP 208
           + HQ   +S         P+ P  LFS A  +SP  SP
Sbjct: 181 MYHQGGMFS---------PAIPLGLFSPAGFMSPFRSP 200

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BLAST of ClCG02G000620 vs. Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.1e-13
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 1


Query: 24  GPRPPQLRVSQESRKI-KKPP---PHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S KI KKPP   PHPQP PP      P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSAAATDGDLS 107
              NNFM++VQRLTG +S + T    S
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSS 99

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BLAST of ClCG02G000620 vs. Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-06
Identity = 45/158 (28.48%), Postives = 71/158 (44.94%), Query Frame = 1


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHV 80
           ++ G RP  L+++ ES  IKK         P GR            P+IIY  SPKVIH 
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRA----------SPVIIYAHSPKVIHT 67

Query: 81  AENNFMSVVQRLTGL------SSAAATDGDLSPAARLATIEKASPRSEREREREREINVS 140
              +FM++VQRLTGL      +++ ++   ++    +     A+P S+   +R++     
Sbjct: 68  RAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQK----- 127

Query: 141 DMMDLAEVPVELGQIPGILSPAPATLAPIPTG--YFSP 171
               L ++P        + +P+  TL   PT   Y SP
Sbjct: 128 ----LTDMP--------LFTPSSMTLFGSPTQLMYMSP 138

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BLAST of ClCG02G000620 vs. Swiss-Prot
Match: VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.3e-06
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 1


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKKPP  P       +P           P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKKPPS-PSSFSSAAKPR---------HPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLS 97
           FM++VQ+LTG++
Sbjct: 101 FMALVQKLTGMT 102

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BLAST of ClCG02G000620 vs. TrEMBL
Match: A0A0A0LK21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.1e-107
Identity = 196/215 (91.16%), Postives = 199/215 (92.56%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 216
           L HELSPHW SPSALFS PL+SPISSPNIFNNLFD
Sbjct: 181 LFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of ClCG02G000620 vs. TrEMBL
Match: W0TUF0_ACAMN (Map kinase substrate OS=Acacia mangium PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.3e-45
Identity = 110/220 (50.00%), Postives = 141/220 (64.09%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGY    SP    ++E+ LQGPRP  L VS+ES KI+KPP          RP   P 
Sbjct: 1   MNPPGYPTGDSPPPQSRRELALQGPRPSPLSVSKESHKIRKPPLPRHAY----RPAAVPC 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
             + PQP+IIY +SPKVIHV  ++FM VVQRLTG SS A+  GD+SPAARLA+IEK SP 
Sbjct: 61  QQEQPQPVIIYSVSPKVIHVPVDDFMKVVQRLTGPSSPASRSGDVSPAARLASIEKTSP- 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
                E+ER  N  +MMDL E  VE+ Q  GILSPAP TL  I +  FSP  + ++L++ 
Sbjct: 121 ----SEKERFQNGDEMMDLLE-GVEVSQFHGILSPAPGTLPGISSEIFSPTTDPETLSW- 180

Query: 181 LIHELSPHWP-----SPSALFSAPLVSPISSPNIFNNLFD 216
            +H++SP W      SPS LFS  + SP+ SP++F ++FD
Sbjct: 181 -LHDMSPFWSSSFAGSPSGLFSTSIASPLPSPDVF-SIFD 207

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BLAST of ClCG02G000620 vs. TrEMBL
Match: W9QUF1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020732 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.5e-45
Identity = 114/232 (49.14%), Postives = 144/232 (62.07%), Query Frame = 1


Query: 1   MNPPG-------YSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGG 60
           MNPP        Y  A    +P K+E+ LQGPRP  L+VS++S KI+KPPP P+P     
Sbjct: 1   MNPPSPPPPPEFYGGAHGQPSPPKRELNLQGPRPSPLKVSKDSHKIRKPPPVPRPTHTHA 60

Query: 61  RPPLPPGPAQWPQ----PLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAAT---DGDLS 120
                  P+   Q    P+IIY +SPKVIH    +FMS+VQRLTG +S +++    GDLS
Sbjct: 61  HTTTTSFPSSSDQIRHEPVIIYTVSPKVIHATVTDFMSIVQRLTGAASPSSSFSGAGDLS 120

Query: 121 PAARLATIEKASPRSEREREREREINVSD-MMDLAEVPVELGQIPGILSPAPATLAP-IP 180
           PAARLA+IE+ SP SERERERERE    + +M+      E+GQ PGILSPAPA+L P IP
Sbjct: 121 PAARLASIERTSP-SERERERERERGSGEALMEKELEEFEMGQFPGILSPAPASLPPAIP 180

Query: 181 TGYFSPAIEHQSLAYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
            G FSP  + QSL  S + +LSPHW + +    +PLVSP  S     NLFDF
Sbjct: 181 PGLFSPGWDPQSL--SFLQDLSPHWNNNNNFMVSPLVSPSPSSLDIFNLFDF 229

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BLAST of ClCG02G000620 vs. TrEMBL
Match: I1K4X4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G190000 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.6e-44
Identity = 112/222 (50.45%), Postives = 148/222 (66.67%), Query Frame = 1


Query: 1   MNPPGY--SAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLP 60
           MNPP +  +AAG+ + P KKE+QLQG RPP LRVS++S KI+KPP     +PP    P P
Sbjct: 1   MNPPEFPSAAAGTSSPPGKKELQLQGTRPPPLRVSKDSHKIRKPP-----LPPTAHQPAP 60

Query: 61  PGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD---GDLSPAARLATIE 120
           P P +  +P+IIY +SPKV+HV  ++FM+VVQRLTG SS A  +   GD+SPAARLA+IE
Sbjct: 61  PPPPEQRKPVIIYTVSPKVLHVTVSDFMNVVQRLTGPSSGAEPNLRAGDVSPAARLASIE 120

Query: 121 KASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQ 180
           + SP SERE+ R  + +V+ M++     VE+GQ PGILS  PATL PI  G+FS     +
Sbjct: 121 RTSP-SEREKVRSEDNDVTLMLE----GVEVGQFPGILS--PATLPPISPGFFS-----E 180

Query: 181 SLAYSLIHELSPHW------PSPSALFSAPLVSPISSPNIFN 212
           S   S  ++LSP W       SPS LF   ++SP+ SP+IFN
Sbjct: 181 SQTTSFWNDLSPFWSTTSFIASPSGLFPGNVMSPLPSPDIFN 205

[Close]

BLAST of ClCG02G000620 vs. TrEMBL
Match: K7KLI4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-42
Identity = 110/218 (50.46%), Postives = 130/218 (59.63%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPP     G+P  P KKE+QLQGPRPP L+VS++S KIKKPPPHP           P  
Sbjct: 69  MNPPEIPFGGAP--PPKKEVQLQGPRPPPLKVSKDSHKIKKPPPHPAHHHHNHPHAPPEQ 128

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSA---AATDGDLSPAARLATIEKA 120
             Q  +P+IIY +SPKVIHV   +FM VVQRLTG SS     A  GD+SPAARLA+IEK 
Sbjct: 129 NLQQREPVIIYSVSPKVIHVTPGDFMDVVQRLTGASSGEYPPAGRGDVSPAARLASIEKT 188

Query: 121 SPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSL 180
           SP    ERER       D+  + E  VE+GQ PGIL+P P TL PIP   FSP I  +  
Sbjct: 189 SP---SERERVLHYKDDDIAWMLEEGVEVGQFPGILTPEPGTLPPIPAEVFSPPISGEDF 248

Query: 181 AYSLIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 216
           + S     S    SPS   S  + SP  SPN+F +LFD
Sbjct: 249 SPS-YWSASSFLASPSGFLSVAVASPQPSPNLF-SLFD 279

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BLAST of ClCG02G000620 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 97/218 (44.50%), Postives = 126/218 (57.80%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLP 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPP-- 60

Query: 61  PGPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD----GDLSPAARLATI 120
             P    +P++IY +SPKV+H   + FM+VVQRLTG+SS    +    GD+SPAARLA+ 
Sbjct: 61  --PYIPREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           E ASPR  +E   R+   EIN + M + AE     G  PGILSP+PA L    TG FSP 
Sbjct: 121 ENASPRGGKEPAARDETVEINTA-MEEAAEFG---GYAPGILSPSPALLPTASTGIFSP- 180

Query: 181 IEHQSLAYSLIHELSPHWPS-PSALFS-APLVSPISSP 208
           + HQ   +S         P+ P  LFS A  +SP  SP
Sbjct: 181 MYHQGGMFS---------PAIPLGLFSPAGFMSPFRSP 200

[Close]

BLAST of ClCG02G000620 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 1


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRKI-KKPP---PHPQPVPPGGRPPLPPGPAQWPQPLI 73
           +PR + I   GPRP  L+V  +S KI KKPP   PHPQP PP      P      P P+I
Sbjct: 5   SPRSRGIL--GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLS 107
           IY +SP++IH   NNFM++VQRLTG +S + T    S
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYS 99

[Close]

BLAST of ClCG02G000620 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-14
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 1


Query: 24  GPRPPQLRVSQESRKI-KKPP---PHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S KI KKPP   PHPQP PP      P      P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSAAATDGDLS 107
              NNFM++VQRLTG +S + T    S
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSS 99

[Close]

BLAST of ClCG02G000620 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 45/158 (28.48%), Postives = 71/158 (44.94%), Query Frame = 1


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHV 80
           ++ G RP  L+++ ES  IKK         P GR            P+IIY  SPKVIH 
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRA----------SPVIIYAHSPKVIHT 67

Query: 81  AENNFMSVVQRLTGL------SSAAATDGDLSPAARLATIEKASPRSEREREREREINVS 140
              +FM++VQRLTGL      +++ ++   ++    +     A+P S+   +R++     
Sbjct: 68  RAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQK----- 127

Query: 141 DMMDLAEVPVELGQIPGILSPAPATLAPIPTG--YFSP 171
               L ++P        + +P+  TL   PT   Y SP
Sbjct: 128 ----LTDMP--------LFTPSSMTLFGSPTQLMYMSP 138

[Close]

BLAST of ClCG02G000620 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07
Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = 1


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPGPAQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKKPP  P       +P           P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKKPPS-PSSFSSAAKPR---------HPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLS 97
           FM++VQ+LTG++
Sbjct: 101 FMALVQKLTGMT 102

[Close]

BLAST of ClCG02G000620 vs. NCBI nr
Match: gi|659121968|ref|XP_008460908.1| (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-109
Identity = 199/216 (92.13%), Postives = 202/216 (93.52%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
           L HELSPHWPSPSALFS PL+SPISSPNIFNNLFDF
Sbjct: 181 LFHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of ClCG02G000620 vs. NCBI nr
Match: gi|778670197|ref|XP_011649396.1| (PREDICTED: protein MKS1-like [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 7.3e-107
Identity = 196/215 (91.16%), Postives = 199/215 (92.56%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVP  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  PAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATDGDLSPAARLATIEKASPR 120
           P+QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS A TDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPAIEHQSLAYS 180
           S    EREREINVSDMMDLAEV VELGQIPGILSPAP TLAPIPTGYFSPAIE QS +YS
Sbjct: 121 S----EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYS 180

Query: 181 LIHELSPHWPSPSALFSAPLVSPISSPNIFNNLFD 216
           L HELSPHW SPSALFS PL+SPISSPNIFNNLFD
Sbjct: 181 LFHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of ClCG02G000620 vs. NCBI nr
Match: gi|731387859|ref|XP_010649402.1| (PREDICTED: protein MKS1 [Vitis vinifera])

HSP 1 Score: 193.4 bits (490), Expect = 4.2e-46
Identity = 116/231 (50.22%), Postives = 150/231 (64.94%), Query Frame = 1


Query: 1   MNPPGY-SAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPP 60
           MNPP + S+ G   +P+++E+Q+QGPRP  L+VS+ES KIKKPP  P P      PP P 
Sbjct: 21  MNPPDFFSSGGDGPSPQRRELQIQGPRPSPLKVSKESHKIKKPPTAPLPAHRQTAPPPPE 80

Query: 61  GPAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTG--LSSAAATD------GDLSPAARL 120
              Q  +P+IIY ISPKVIH   N+F+SVVQRLTG   +S +A+D      GDLSPAARL
Sbjct: 81  N--QNREPVIIYTISPKVIHTTVNDFLSVVQRLTGNYATSPSASDLAASGAGDLSPAARL 140

Query: 121 ATIEKASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           A+IEK SP  ER+R     + V  +++     VE+GQIPGILSPAPATL PIP G+FSPA
Sbjct: 141 ASIEKTSPPKERDRGGGGGVGVMGLVE----GVEVGQIPGILSPAPATLPPIPPGFFSPA 200

Query: 181 IEHQSLAYSLIHEL------SPHWPSPSALFSAPLVSPISSPNIFNNLFDF 217
            + Q+L  S++ +L      S    SPS L SAP++SP  SP+  +   DF
Sbjct: 201 PDPQTL--SVLQDLNYFLQGSSFISSPSNLLSAPIISPTLSPDFLSQFLDF 243

[Close]

BLAST of ClCG02G000620 vs. NCBI nr
Match: gi|1021493552|ref|XP_016189761.1| (PREDICTED: protein MKS1 [Arachis ipaensis])

HSP 1 Score: 191.0 bits (484), Expect = 2.1e-45
Identity = 113/230 (49.13%), Postives = 155/230 (67.39%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MN P +S+  + +   ++E+ +QGPRPP LRVS+ES KI KPP  PQP       PLPP 
Sbjct: 1   MNLPEFSSGETSSPSSRRELPIQGPRPPPLRVSKESHKISKPPRPPQPA--AANQPLPPP 60

Query: 61  P---AQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD------GDLSPAARL 120
           P   AQ  +P+IIY +SPKV+HV  ++FM+VVQRLTG +S++A +      GD+SPAARL
Sbjct: 61  PDAAAQHREPVIIYSVSPKVLHVTVSDFMNVVQRLTGPNSSSAGEEPLPRSGDISPAARL 120

Query: 121 ATIEKASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           A+IEK SP SE+ER    + ++S +++   V VE+GQ P ILSPAP TL PI +G+FSPA
Sbjct: 121 ASIEKTSP-SEKERVHAGDEDMSWLLE--GVGVEMGQFPSILSPAPGTLPPISSGFFSPA 180

Query: 181 IEHQSLAYSLIHELSPHWP------SPSALFSAPLVSPISSPNIFNNLFD 216
            + Q+   S  HEL+P WP      SPS L S  ++SP+ SP++F ++FD
Sbjct: 181 SDPQTA--SFFHELNPFWPANNFVASPSGLLS--VLSPLPSPDLF-SIFD 220

[Close]

BLAST of ClCG02G000620 vs. NCBI nr
Match: gi|1012095453|ref|XP_015955898.1| (PREDICTED: protein MKS1 [Arachis duranensis])

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 113/230 (49.13%), Postives = 155/230 (67.39%), Query Frame = 1


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPGGRPPLPPG 60
           MN P +S+  + +   ++E+ +QGPRPP LRVS+ES KI KPP  PQP       PLPP 
Sbjct: 1   MNLPEFSSGETSSPSSRRELPIQGPRPPPLRVSKESHKISKPPRPPQPA--AANQPLPPP 60

Query: 61  P---AQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSAAATD------GDLSPAARL 120
           P   AQ  +P+IIY +SPKV+HV  ++FM+VVQRLTG +S++A +      GD+SPAARL
Sbjct: 61  PDAAAQHREPVIIYSVSPKVLHVTVSDFMNVVQRLTGPNSSSAGEEPLPRSGDISPAARL 120

Query: 121 ATIEKASPRSEREREREREINVSDMMDLAEVPVELGQIPGILSPAPATLAPIPTGYFSPA 180
           A+IEK SP SE+ER    + ++S +++   V VE+GQ P ILSPAP TL PI +G+FSPA
Sbjct: 121 ASIEKTSP-SEKERVHAGDEDMSWLLE--GVEVEMGQFPSILSPAPGTLPPISSGFFSPA 180

Query: 181 IEHQSLAYSLIHELSPHWP------SPSALFSAPLVSPISSPNIFNNLFD 216
            + Q+   S  HEL+P WP      SPS L S  ++SP+ SP++F ++FD
Sbjct: 181 SDPQT--GSFFHELNPFWPANNFVASPSGLLS--VLSPLPSPDLF-SIFD 220

The following BLAST results are available for this feature:

BLAST of ClCG02G000620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MKS1_ARATH	1.8e-33	44.50	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
NSRB_ARATH	8.1e-13	45.98	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1	[more]
VQ8_ARATH	1.5e-06	28.48	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2...	[more]
VQ20_ARATH	7.3e-06	37.50	VQ motif-containing protein 20 OS=Arabidopsis thaliana GN=VQ20 PE=2 SV=1	[more]

BLAST of ClCG02G000620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK21_CUCSA	5.1e-107	91.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302100 PE=4 SV=1	[more]
W0TUF0_ACAMN	4.3e-45	50.00	Map kinase substrate OS=Acacia mangium PE=2 SV=1	[more]
W9QUF1_9ROSA	9.5e-45	49.14	Uncharacterized protein OS=Morus notabilis GN=L484_020732 PE=4 SV=1	[more]
I1K4X4_SOYBN	3.6e-44	50.45	Uncharacterized protein OS=Glycine max GN=GLYMA_05G190000 PE=4 SV=1	[more]
K7KLI4_SOYBN	1.5e-42	50.46	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

BLAST of ClCG02G000620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	1.0e-34	44.50	MAP kinase substrate 1	[more]
AT1G21326.1	1.1e-15	47.42	VQ motif-containing protein	[more]
AT1G21320.1	4.5e-14	45.98	nucleotide binding;nucleic acid binding	[more]
AT1G68450.1	8.3e-08	28.48	VQ motif-containing protein	[more]
AT3G18360.1	4.1e-07	37.50	VQ motif-containing protein	[more]

BLAST of ClCG02G000620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121968\|ref\|XP_008460908.1\|	2.1e-109	92.13	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
gi\|778670197\|ref\|XP_011649396.1\|	7.3e-107	91.16	PREDICTED: protein MKS1-like [Cucumis sativus]	[more]
gi\|731387859\|ref\|XP_010649402.1\|	4.2e-46	50.22	PREDICTED: protein MKS1 [Vitis vinifera]	[more]
gi\|1021493552\|ref\|XP_016189761.1\|	2.1e-45	49.13	PREDICTED: protein MKS1 [Arachis ipaensis]	[more]
gi\|1012095453\|ref\|XP_015955898.1\|	2.7e-45	49.13	PREDICTED: protein MKS1 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000620.1	ClCG02G000620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 score: 2.3
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 6..214 score: 2.7
None	No IPR available	PANTHER	PTHR33143:SF5	SUBFAMILY NOT NAMED	coord: 6..214 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G000620	Csa2G302100	Cucumber (Chinese Long) v2	cuwcgB124
ClCG02G000620	MELO3C023257	Melon (DHL92) v3.5.1	mewcgB091
ClCG02G000620	Cla007798	Watermelon (97103) v1	wcgwmB206
ClCG02G000620	Cla97C02G026890	Watermelon (97103) v2	wcgwmbB138
ClCG02G000620	Bhi10G001326	Wax gourd	wcgwgoB303
ClCG02G000620	CSPI02G15600	Wild cucumber (PI 183967)	cpiwcgB130
ClCG02G000620	Cucsa.249990	Cucumber (Gy14) v1	cgywcgB440
ClCG02G000620	CmaCh20G010680	Cucurbita maxima (Rimu)	cmawcgB482
ClCG02G000620	CmaCh02G006220	Cucurbita maxima (Rimu)	cmawcgB544
ClCG02G000620	CmoCh02G006260	Cucurbita moschata (Rifu)	cmowcgB540
ClCG02G000620	CmoCh20G010760	Cucurbita moschata (Rifu)	cmowcgB480
ClCG02G000620	Lsi10G007140	Bottle gourd (USVL1VR-Ls)	lsiwcgB056
ClCG02G000620	Cp4.1LG16g00810	Cucurbita pepo (Zucchini)	cpewcgB268
ClCG02G000620	Cp4.1LG05g10550	Cucurbita pepo (Zucchini)	cpewcgB647
ClCG02G000620	CsGy2G015570	Cucumber (Gy14) v2	cgybwcgB121
ClCG02G000620	MELO3C023257.2	Melon (DHL92) v3.6.1	medwcgB089
ClCG02G000620	Carg11687	Silver-seed gourd	carwcgB1030
ClCG02G000620	Carg24324	Silver-seed gourd	carwcgB0694
ClCG02G000620	CsaV3_2G018150	Cucumber (Chinese Long) v3	cucwcgB139

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G000620	Cucurbita pepo (Zucchini)	cpewcgB274