CsGy2G015570 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G015570
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein MKS1-like
Location	Chr2 : 15501283 .. 15501921 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

mRNA sequence

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

Coding sequence (CDS)

ATGAATCCGCCGGGATATTCCGCCGCCGGCAGCCCCACTACCCCCAGAAAGAAAGAGATCCAGCTACAAGGTCCTCGTCCACCTCAACTCCGCGTCAGTCAAGAGTCTCGTAAAATCAAGAAGCCACCACCGCATCCTCAGCCGGTTCCCCAACCGGGCCGGCCTCCTCTCCCACCGGGTCCTTCCCAATGGCCTCAACCCCTTATAATCTACGACATCTCCCCCAAAGTCATCCACGTCGCGGAGAATAACTTCATGTCCGTCGTTCAACGCCTCACTGGACAATCCTCCACCGCCGTAACCGATGGCGACCTCTCCCCGGCGGCTAGACTGGCTACAATCGAGAAAGCTAGTCCCCGATCCGAAAGAGAGAGAGAAATCAACGTTAGTGATATGATGGATTTGGCAGAGGTTTCGGTGGAATTAGGGCAAATCCCAGGAATCTTATCACCGGCTCCGGGAACTCTAGCTCCGATTCCTACCGGGTATTTCTCGCCGGCGATTGAACCACAAAGCTTTTCTTATTCATTGTTTCATGAATTGAGTCCTCATTGGGCAAGCCCTTCTGCTCTGTTCTCAACCCCTTTGATTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACATTTAG

Protein sequence

MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLFHELSPHWASPSALFSTPLISPISSPNIFNNLFDI

Homology

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BLAST of CsGy2G015570 vs. NCBI nr
Match: XP_011649396.1 (PREDICTED: protein MKS1-like [Cucumis sativus] >KGN62143.1 hypothetical protein Csa_2G302100 [Cucumis sativus])

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

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BLAST of CsGy2G015570 vs. NCBI nr
Match: XP_008460908.1 (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPP XXXXXXXXXXXXXX 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHXXXXXXXXXXXXXXX 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of CsGy2G015570 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 6.8e-77
Identity = 158/212 (74.53%), Postives = 166/212 (78.30%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

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BLAST of CsGy2G015570 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 3.4e-76
Identity = 157/212 (74.06%), Postives = 166/212 (78.30%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNP G SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSST-AVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SST + TDGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RSEREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL H
Sbjct: 121 RSEREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 212

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BLAST of CsGy2G015570 vs. NCBI nr
Match: XP_023007245.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 2.7e-73
Identity = 153/212 (72.17%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSS-TAVTDGDLSPAARLATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS ++  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFH 180
           RS  EREI+VSDMMDL EV VELGQ P              +G+FSP IEPQSF+YSL H
Sbjct: 121 RS--EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSLIH 180

Query: 181 ELSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           ELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 ELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 210

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BLAST of CsGy2G015570 vs. TAIR10
Match: AT3G18690.1 (MAP kinase substrate 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXX 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP        XXXXXXX
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPP----KHPAXXXXXXX 60

Query: 61  XGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
           X       P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSP 167
           E ASPR  +E   R+  V     + E +   G  P              TG FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171

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BLAST of CsGy2G015570 vs. TAIR10
Match: AT1G21326.1 (VQ motif-containing protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-09
Identity = 64/146 (43.84%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PP XXXXXXXXXXXXXX     P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTGQSS---------------------TAVTDGDLSPA 133
           IY +SP++IH   NNFM++VQRLTG++S                        + G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSXXXXXXXXXXXXXXPKDASTMVDTSHGLISPA 124

Query: 134 ARLATIEKASPRSEREREINVSDMMD 135
           AR A  EKA+  +E    +     MD
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMD 148

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BLAST of CsGy2G015570 vs. TAIR10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PP XXXXXXXXXXXXXX       P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQS-------------------STAV--TDGDLSPAARLATIEKAS 135
              NNFM++VQRLTGQ+                   ST V  + G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

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BLAST of CsGy2G015570 vs. TAIR10
Match: AT1G68450.1 (VQ motif-containing protein)

HSP 1 Score: 42.4 bits (98), Expect = 4.2e-04
Identity = 38/111 (34.23%), Postives = 49/111 (44.14%), Query Frame = 0


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIHV 80
           ++ G RP  L+++ ES  IKK                   P     P+IIY  SPKVIH 
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPR----------PHGRASPVIIYAHSPKVIHT 67

Query: 81  AENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSD 132
              +FM++VQRLTG          L    R  T E +S  S    E+NV D
Sbjct: 68  RAEDFMALVQRLTG----------LDEIIRRNTSESSS--SVVTEEVNVGD 96

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BLAST of CsGy2G015570 vs. Swiss-Prot
Match: sp|Q8LGD5|MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-17
Identity = 73/175 (41.71%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXX 60
           M+P  Y A G+P+    +K+++Q+ GPRP  L V ++S KIKKPP        XXXXXXX
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPP----KHPAXXXXXXX 60

Query: 61  XGPSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTD----GDLSPAARLATI 120
           X       P++IY +SPKV+H   + FM+VVQRLTG SS    +    GD+SPAARLA+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSP 167
           E ASPR  +E   R+  V     + E +   G  P              TG FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171

[Close]

BLAST of CsGy2G015570 vs. Swiss-Prot
Match: sp|F4HWF9|NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 60/136 (44.12%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PP XXXXXXXXXXXXXX       P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGQS-------------------STAV--TDGDLSPAARLATIEKAS 135
              NNFM++VQRLTGQ+                   ST V  + G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

[Close]

BLAST of CsGy2G015570 vs. TrEMBL
Match: tr|A0A0A0LK21|A0A0A0LK21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 213
           LSPHWASPSALFSTPLISPISSPNIFNNLFDI
Sbjct: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFDI 212

[Close]

BLAST of CsGy2G015570 vs. TrEMBL
Match: tr|A0A1S3CD17|A0A1S3CD17_CUCME (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 9.3e-91
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPP XXXXXXXXXXXXXX 
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHXXXXXXXXXXXXXXX 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
           PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE
Sbjct: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180

Query: 181 LSPHWASPSALFSTPLISPISSPNIFNNLFD 212
           LSPHW SPSALFSTPLISPISSPNIFNNLFD
Sbjct: 181 LSPHWPSPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of CsGy2G015570 vs. TrEMBL
Match: tr|W0TUF0|W0TUF0_ACAMN (Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.6e-36
Identity = 100/216 (46.30%), Postives = 129/216 (59.72%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MNPPGY    SP    ++E+ LQGPRP  L VS+ES KI+KPP                 
Sbjct: 1   MNPPGYPTGDSPPPQSRRELALQGPRPSPLSVSKESHKIRKPP----LPRHAYRPAAVPC 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120
             + PQP+IIY +SPKVIHV  ++FM VVQRLTG SS A   GD+SPAARLA+IEK SP 
Sbjct: 61  QQEQPQPVIIYSVSPKVIHVPVDDFMKVVQRLTGPSSPASRSGDVSPAARLASIEKTSP- 120

Query: 121 SEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHE 180
           SE+ER  N  +MMDL E  VE+ Q                +  FSP  +P++ S+   H+
Sbjct: 121 SEKERFQNGDEMMDLLE-GVEVSQFHGILSPAPGTLPGISSEIFSPTTDPETLSW--LHD 180

Query: 181 LSPHWA-----SPSALFSTPLISPISSPNIFNNLFD 212
           +SP W+     SPS LFST + SP+ SP++F ++FD
Sbjct: 181 MSPFWSSSFAGSPSGLFSTSIASPLPSPDVF-SIFD 207

[Close]

BLAST of CsGy2G015570 vs. TrEMBL
Match: tr|A0A1S2YG04|A0A1S2YG04_CICAR (protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.8e-33
Identity = 103/220 (46.82%), Postives = 135/220 (61.36%), Query Frame = 0


Query: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60
           MN P + + G+ T   KKE+Q+QG RPP LRVS+ES  I+KPP        XXXXXXX G
Sbjct: 1   MNLPDFHSGGTSTPSPKKELQIQGTRPPPLRVSKESHTIRKPP-----LPPXXXXXXXAG 60

Query: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSS---TAVTDGDLSPAARLATIEKA 120
            SQ  QPLIIY +SPKV+HV  ++FM VVQRLTG S+   T    G +SPAARLA+IE+ 
Sbjct: 61  ASQHRQPLIIYSVSPKVLHVTVSDFMDVVQRLTGPSAGEETPQQSGAISPAARLASIERT 120

Query: 121 SPRSEREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSL 180
           SP +ERE+  N+ D +      +E+GQ P               G+FSP  E Q+ S+  
Sbjct: 121 SP-TEREKAQNIDDDLTWLLDGIEMGQFPGILSPAPATLPPISQGFFSPMTETQTTSF-- 180

Query: 181 FHELSPHW------ASPSALFSTPLISPISSPNIFNNLFD 212
           +H+ SP W      ASPS L S  ++SP+ SP++F N+FD
Sbjct: 181 WHDTSPLWYGNSFVASPSGLLSATVVSPLPSPDLF-NIFD 211

[Close]

BLAST of CsGy2G015570 vs. TrEMBL
Match: tr|A0A2P5E9J1|A0A2P5E9J1_9ROSA (VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.4e-32
Identity = 99/198 (50.00%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXGPSQWPQPLIIYDISPKVIHV 80
           QLQGPRP  L+V++ES KI+KPPP      X           Q  +P+IIY +SPKVIH 
Sbjct: 26  QLQGPRPTPLKVNKESHKIRKPPPHPPLRQXHPPPAGDYHQRQ--EPVIIYTVSPKVIHA 85

Query: 81  AENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPRSEREREINVSDMMDLAEVSV 140
           + ++FMSVVQRLTG S      G LSPAARLA+IEK SP SERER     D++ + E  V
Sbjct: 86  SVSDFMSVVQRLTGPSPVGSPSGALSPAARLASIEKTSP-SERERP-GGGDLLGMVE-GV 145

Query: 141 ELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSLFHELSPHW------ASPSALFST 200
           ELGQ P               G+FSP  +PQ+   S+ H+LSP W       SPSAL S 
Sbjct: 146 ELGQFPGILSPAPATLPPIPAGFFSPVSDPQTL--SMLHDLSPFWHSNSFMPSPSALLSA 205

Query: 201 PLISPI-SSPNIFNNLFD 212
           PLISP  SS +IFNNLFD
Sbjct: 206 PLISPSPSSSDIFNNLFD 216

The following BLAST results are available for this feature:

BLAST of CsGy2G015570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649396.1	2.0e-92	100.00	PREDICTED: protein MKS1-like [Cucumis sativus] >KGN62143.1 hypothetical protein ...	[more]
XP_008460908.1	1.4e-90	98.58	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
XP_022947651.1	6.8e-77	74.53	protein MKS1-like [Cucurbita moschata]	[more]
XP_023533977.1	3.4e-76	74.06	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007245.1	2.7e-73	72.17	protein MKS1-like [Cucurbita maxima]	[more]

BLAST of CsGy2G015570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	1.7e-18	41.71	MAP kinase substrate 1	[more]
AT1G21326.1	3.3e-09	43.84	VQ motif-containing protein	[more]
AT1G21320.1	1.8e-07	44.12	nucleotide binding;nucleic acid binding	[more]
AT1G68450.1	4.2e-04	34.23	VQ motif-containing protein	[more]

BLAST of CsGy2G015570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGD5\|MKS1_ARATH	3.2e-17	41.71	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
sp\|F4HWF9\|NSRB_ARATH	3.3e-06	44.12	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CsGy2G015570 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LK21\|A0A0A0LK21_CUCSA	1.3e-92	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1	[more]
tr\|A0A1S3CD17\|A0A1S3CD17_CUCME	9.3e-91	98.58	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
tr\|W0TUF0\|W0TUF0_ACAMN	8.6e-36	46.30	Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1	[more]
tr\|A0A1S2YG04\|A0A1S2YG04_CICAR	6.8e-33	46.82	protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1	[more]
tr\|A0A2P5E9J1\|A0A2P5E9J1_9ROSA	3.4e-32	50.00	VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G015570.1	CsGy2G015570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 7.2E-11 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..63
None	No IPR available	PANTHER	PTHR33143:SF26	F16F4.1 PROTEIN	coord: 15..211
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 15..211

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G015570	Cla007798	Watermelon (97103) v1	cgybwmB134
CsGy2G015570	Csa2G302100	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G015570	MELO3C023257	Melon (DHL92) v3.5.1	cgybmeB086
CsGy2G015570	ClCG02G000620	Watermelon (Charleston Gray)	cgybwcgB121
CsGy2G015570	CSPI02G15600	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G015570	CmaCh20G010680	Cucurbita maxima (Rimu)	cgybcmaB219
CsGy2G015570	CmaCh02G006220	Cucurbita maxima (Rimu)	cgybcmaB223
CsGy2G015570	CmoCh20G010760	Cucurbita moschata (Rifu)	cgybcmoB210
CsGy2G015570	CmoCh02G006260	Cucurbita moschata (Rifu)	cgybcmoB215
CsGy2G015570	Lsi10G007140	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G015570	Cp4.1LG05g10550	Cucurbita pepo (Zucchini)	cgybcpeB247
CsGy2G015570	Cp4.1LG16g00810	Cucurbita pepo (Zucchini)	cgybcpeB194
CsGy2G015570	MELO3C023257.2	Melon (DHL92) v3.6.1	cgybmedB081
CsGy2G015570	CsaV3_2G018150	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G015570	Cla97C02G026890	Watermelon (97103) v2	cgybwmbB115
CsGy2G015570	Bhi10G001326	Wax gourd	cgybwgoB170
CsGy2G015570	Carg24324	Silver-seed gourd	carcgybB0715
CsGy2G015570	Carg11687	Silver-seed gourd	carcgybB1038

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G015570	Cucurbita moschata (Rifu)	cgybcmoB214
CsGy2G015570	Cucurbita pepo (Zucchini)	cgybcpeB199