Carg11687 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11687
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein MKS1-like
Location	Cucurbita_argyrosperma_scaffold_035 : 825238 .. 825885 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTGAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

mRNA sequence

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTGAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

Coding sequence (CDS)

ATGAACCCGCCCGGCTCCTCCGCCGGCGGCAGCCCCAACACCCCAAGAAAGAAGGAGATCCAGCTACAGGGCCCCCGCCCGCCTCAACTCCGTGTCAACCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCCCCTTCTGGCCGCCCTCCTCTCCCTCCAGCCGCCTCCCAATGGCCTCAACCACTCATCATCTACGACATCTCCCCCAAAGTCCTCCACGTCGCCGAGAACAACTTCATGTCCGTCGTGCAGCGCCTCACCGGCCTCTCCTCCGCCGCTTCCTCCACCGACGGCGACCTCTCCCCAGCAGCGAGATTCGCCACAATCGAAAAAGCCAGCCCCCGATCCGAAAGGGAAAGGGAAAGGGAAATCGACGTTAGCGACATGATGGATTTGACGGAGGTTCCCGTGGAATTAGGGCAAAACCCCGGAATTTTATCTCCAGCACCGGCAAGTCTAGCTCCGATTTCGTCAGGATTCTTCTCGCCGGCGATTGAGCCTCAAAGCTTTACATATTCGTTGATTCACGAGCTGAGCCCCCATTGGCCAAGCCCTTCGGCTCTGTTCCCAGCTCCCCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACCATCTCTTTGACTTTTAG

Protein sequence

MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF

Homology

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BLAST of Carg11687 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RS  EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RS--EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Carg11687 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 1.2e-108
Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNP GSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSS +SSTDGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RS  EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL
Sbjct: 121 RS--EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Carg11687 vs. NCBI nr
Match: XP_023007245.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 4.9e-107
Identity = 207/215 (96.28%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
           ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSA+SS DGDLSPAARFATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RS    EREIDVSDMMDLTEVPVELGQ PGILSPAPASLAPISSGFFSP IEPQSFTYSL
Sbjct: 121 RS----EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
           IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

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BLAST of Carg11687 vs. NCBI nr
Match: XP_022932014.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 172/218 (78.90%), Postives = 184/218 (84.40%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPP- 60
           MNPPG  AGGS   PRKKEIQLQGPRPPQLRV+Q+SRKIKKPPPHPQPIPP+ RPPLPP 
Sbjct: 1   MNPPGYPAGGS---PRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAERPPLPPG 60

Query: 61  -AASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSA-ASSTDGDLSPAARFATIEK 120
             A+QWPQPLIIYDISPKV+HV ENNFMSVVQRLTGLSS+ AS+ DGDLSPAAR A IEK
Sbjct: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGASAPDGDLSPAARLAAIEK 120

Query: 121 ASPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFT 180
           ASPR         DVS+MMDL E+ VEL Q PGILSPAPASLAPI +GFFSPA E  +F 
Sbjct: 121 ASPRXXXXXXXXXDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELPNFP 180

Query: 181 YSLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
           YSLI ELSPHWPSPSALF APLVSPISSPN+FNHLFDF
Sbjct: 181 YSLIQELSPHWPSPSALFSAPLVSPISSPNLFNHLFDF 215

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BLAST of Carg11687 vs. NCBI nr
Match: XP_023512395.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 173/218 (79.36%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPP- 60
           MNPPG  AGGS   PRKKEIQLQGPRPPQLRV+Q+SRKIKKPPPHPQPIPP+GRPPLPP 
Sbjct: 1   MNPPGYPAGGS---PRKKEIQLQGPRPPQLRVSQDSRKIKKPPPHPQPIPPAGRPPLPPG 60

Query: 61  -AASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSA-ASSTDGDLSPAARFATIEK 120
             A+QWPQPLIIYDISPKV+HV ENNFMSVVQRLTGLSS+ A++ DGDLSPAAR A IEK
Sbjct: 61  AGATQWPQPLIIYDISPKVIHVPENNFMSVVQRLTGLSSSGAAAPDGDLSPAARLAAIEK 120

Query: 121 ASPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFT 180
           ASPR   EREREIDVS+MMDL E+ VEL Q PGILSPAPASLAPI +GFFSPA E Q+ +
Sbjct: 121 ASPRP--EREREIDVSEMMDLGEISVELWQTPGILSPAPASLAPIPTGFFSPATELQNLS 180

Query: 181 YSLIHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
           YSLI ELSPHWPSPSALF     SPISSPN+FN+LFDF
Sbjct: 181 YSLIQELSPHWPSPSALF-----SPISSPNLFNNLFDF 208

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BLAST of Carg11687 vs. TAIR10
Match: AT3G18690.1 (MAP kinase substrate 1)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-23
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTP--RKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLP 60
           M+P    AGG+P+    +K+++Q+ GPRP  L V+++S KIKKPP H    P        
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKH----PAXXXXXXX 60

Query: 61  PAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAA---SSTDGDLSPAARFATI 120
                   P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR A+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSP 170
           E ASPR  +E   R+  ++++  M+  E     G  PGILSP+PA L   S+G FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFSP 171

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BLAST of Carg11687 vs. TAIR10
Match: AT1G21326.1 (VQ motif-containing protein)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10
Identity = 77/242 (31.82%), Postives = 107/242 (44.21%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PPH                   P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXPGPVI 64

Query: 74  IYDISPKVLHVAENNFMSVVQRLTG--------------------LSSAASSTDGDLSPA 133
           IY +SP+++H   NNFM++VQRLTG                     S+   ++ G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSXXXXXXXXXXXXXXPKDASTMVDTSHGLISPA 124

Query: 134 ARFATIEKASPRSERER----EREIDVSDMMDLTEVPVELG-----------QNPGILSP 193
           ARFA  EKA+  +E       E  +D                           + GILSP
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMDQYXXXXXXXXXXXXXXXXXGFERPSFHHAGILSP 184

Query: 194 APASLAPISSGFFSP--AIEPQSFTYSLIHELSPHWPSPSALFPAPLVSPISSPNIFNHL 215
            P SL  +S  FFS     +PQ F+ S  ++ +    S     P+ + SP SS ++FN+ 
Sbjct: 185 GPNSLPSVSPDFFSTIGPTDPQGFS-SFFNDFNSILQSS----PSKIQSP-SSMDLFNNF 238

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BLAST of Carg11687 vs. TAIR10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 62/195 (31.79%), Postives = 84/195 (43.08%), Query Frame = 0


Query: 24  GPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLH 83
           GP+P  L+V  +S K IKKP   PPH                     P+ IY ++P+++H
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTG--------------------LSSAASSTDGDLSPAARFATIEKAS 143
              NNFM++VQRLTG                     S+   ++ G +SPAARFA  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTEVPVE-------LGQNPGILSPAPASLAPISSGFFS 182
             +E       E  +D          P +          + GILSP P SL  +S  FFS
Sbjct: 133 ISNELGTFVGGEGTMDQXXXXXXXXXPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

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BLAST of Carg11687 vs. Swiss-Prot
Match: sp|Q8LGD5|MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 5.6e-22
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTP--RKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLP 60
           M+P    AGG+P+    +K+++Q+ GPRP  L V+++S KIKKPP H    P        
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKH----PAXXXXXXX 60

Query: 61  PAASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAA---SSTDGDLSPAARFATI 120
                   P++IY +SPKV+H   + FM+VVQRLTG+SS     S   GD+SPAAR A+ 
Sbjct: 61  XXXXXXXXPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLAST 120

Query: 121 EKASPRSERE---REREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSP 170
           E ASPR  +E   R+  ++++  M+  E     G  PGILSP+PA L   S+G FSP
Sbjct: 121 ENASPRGGKEPAARDETVEINTAME--EAAEFGGYAPGILSPSPALLPTASTGIFSP 171

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BLAST of Carg11687 vs. Swiss-Prot
Match: sp|F4HWF9|NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 62/195 (31.79%), Postives = 84/195 (43.08%), Query Frame = 0


Query: 24  GPRPPQLRVNQESRK-IKKP---PPHPQPIPPSGRPPLPPAASQWPQPLIIYDISPKVLH 83
           GP+P  L+V  +S K IKKP   PPH                     P+ IY ++P+++H
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHXXXXXXXXXXXXXXXXXXXXXPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTG--------------------LSSAASSTDGDLSPAARFATIEKAS 143
              NNFM++VQRLTG                     S+   ++ G +SPAARFA  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTXXXXXXXXXXXXXXXXXXXSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTEVPVE-------LGQNPGILSPAPASLAPISSGFFS 182
             +E       E  +D          P +          + GILSP P SL  +S  FFS
Sbjct: 133 ISNELGTFVGGEGTMDQXXXXXXXXXPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

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BLAST of Carg11687 vs. TrEMBL
Match: tr|A0A1S3CD17|A0A1S3CD17_CUCME (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.1e-74
Identity = 161/215 (74.88%), Postives = 169/215 (78.60%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPH               
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHXXXXXXXXXXXXXXX 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RS  EREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL
Sbjct: 121 RS--EREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 216
            HELSPHWPSPSALF  PL+SPISSPNIFN+LFDF
Sbjct: 181 FHELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

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BLAST of Carg11687 vs. TrEMBL
Match: tr|A0A0A0LK21|A0A0A0LK21_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 7.5e-72
Identity = 158/214 (73.83%), Postives = 166/214 (77.57%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MNPPG SA GSP TPRKKEIQLQGPRPPQLRV+QESRKIKKPPP                
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPXXXXXXXXXXXXXXXG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120
            SQWPQPLIIYDISPKV+HVAENNFMSVVQRLTG SS A  TDGDLSPAAR ATIEKASP
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTA-VTDGDLSPAARLATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180
           RS  EREREI+VSDMMDL EV VELGQ P              +G+FSPAIEPQSF+YSL
Sbjct: 121 RS--EREREINVSDMMDLAEVSVELGQIPXXXXXXXXXXXXXXTGYFSPAIEPQSFSYSL 180

Query: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFD 215
            HELSPHW SPSALF  PL+SPISSPNIFN+LFD
Sbjct: 181 FHELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

[Close]

BLAST of Carg11687 vs. TrEMBL
Match: tr|A0A2P5E9J1|A0A2P5E9J1_9ROSA (VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41
Identity = 117/204 (57.35%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 21  QLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPAAS--QWPQPLIIYDISPKVL 80
           QLQGPRP  L+VN+ES KI+KPPPH    PP  +   PPA    Q  +P+IIY +SPKV+
Sbjct: 26  QLQGPRPTPLKVNKESHKIRKPPPH----PPLRQXHPPPAGDYHQRQEPVIIYTVSPKVI 85

Query: 81  HVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASPRSEREREREIDVSDMMDL 140
           H + ++FMSVVQRLTG  S   S  G LSPAAR A+IEK SP SERER    D+  M++ 
Sbjct: 86  HASVSDFMSVVQRLTG-PSPVGSPSGALSPAARLASIEKTSP-SERERPGGGDLLGMVE- 145

Query: 141 TEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSLIHELSPHW------PSPS 200
               VELGQ PGILSPAPA+L PI +GFFSP  +PQ  T S++H+LSP W      PSPS
Sbjct: 146 ---GVELGQFPGILSPAPATLPPIPAGFFSPVSDPQ--TLSMLHDLSPFWHSNSFMPSPS 205

Query: 201 ALFPAPLVSPI-SSPNIFNHLFDF 216
           AL  APL+SP  SS +IFN+LFDF
Sbjct: 206 ALLSAPLISPSPSSSDIFNNLFDF 217

[Close]

BLAST of Carg11687 vs. TrEMBL
Match: tr|W0TUF0|W0TUF0_ACAMN (Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 112/220 (50.91%), Postives = 144/220 (65.45%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSG-RPPLPP 60
           MNPPG   G SP    ++E+ LQGPRP  L V++ES KI+KP     P+P    RP   P
Sbjct: 1   MNPPGYPTGDSPPPQSRRELALQGPRPSPLSVSKESHKIRKP-----PLPRHAYRPAAVP 60

Query: 61  AASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKAS 120
              + PQP+IIY +SPKV+HV  ++FM VVQRLTG SS AS + GD+SPAAR A+IEK S
Sbjct: 61  CQQEQPQPVIIYSVSPKVIHVPVDDFMKVVQRLTGPSSPASRS-GDVSPAARLASIEKTS 120

Query: 121 PRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYS 180
           P SE+ER +  D  +MMDL E  VE+ Q  GILSPAP +L  ISS  FSP  +P+  T S
Sbjct: 121 P-SEKERFQNGD--EMMDLLE-GVEVSQFHGILSPAPGTLPGISSEIFSPTTDPE--TLS 180

Query: 181 LIHELSPHWP-----SPSALFPAPLVSPISSPNIFNHLFD 215
            +H++SP W      SPS LF   + SP+ SP++F+ +FD
Sbjct: 181 WLHDMSPFWSSSFAGSPSGLFSTSIASPLPSPDVFS-IFD 207

[Close]

BLAST of Carg11687 vs. TrEMBL
Match: tr|A0A1S2YG04|A0A1S2YG04_CICAR (protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.5e-37
Identity = 112/222 (50.45%), Postives = 142/222 (63.96%), Query Frame = 0


Query: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60
           MN P   +GG+     KKE+Q+QG RPP LRV++ES  I+KP     P+PP         
Sbjct: 1   MNLPDFHSGGTSTPSPKKELQIQGTRPPPLRVSKESHTIRKP-----PLPPXXXXXXXAG 60

Query: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASS--TDGDLSPAARFATIEKA 120
           ASQ  QPLIIY +SPKVLHV  ++FM VVQRLTG S+   +    G +SPAAR A+IE+ 
Sbjct: 61  ASQHRQPLIIYSVSPKVLHVTVSDFMDVVQRLTGPSAGEETPQQSGAISPAARLASIERT 120

Query: 121 SPRSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTY 180
           SP +ERE+ + ID  D+  L +  +E+GQ PGILSPAPA+L PIS GFFSP  E Q  T 
Sbjct: 121 SP-TEREKAQNID-DDLTWLLD-GIEMGQFPGILSPAPATLPPISQGFFSPMTETQ--TT 180

Query: 181 SLIHELSPHW------PSPSALFPAPLVSPISSPNIFNHLFD 215
           S  H+ SP W       SPS L  A +VSP+ SP++FN +FD
Sbjct: 181 SFWHDTSPLWYGNSFVASPSGLLSATVVSPLPSPDLFN-IFD 211

The following BLAST results are available for this feature:

BLAST of Carg11687 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947651.1	2.1e-110	99.07	protein MKS1-like [Cucurbita moschata]	[more]
XP_023533977.1	1.2e-108	97.67	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007245.1	4.9e-107	96.28	protein MKS1-like [Cucurbita maxima]	[more]
XP_022932014.1	2.4e-82	78.90	protein MKS1-like [Cucurbita moschata]	[more]
XP_023512395.1	2.7e-81	79.36	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg11687 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	3.1e-23	42.37	MAP kinase substrate 1	[more]
AT1G21326.1	5.2e-10	31.82	VQ motif-containing protein	[more]
AT1G21320.1	1.8e-07	31.79	nucleotide binding;nucleic acid binding	[more]

BLAST of Carg11687 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LGD5\|MKS1_ARATH	5.6e-22	42.37	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
sp\|F4HWF9\|NSRB_ARATH	3.3e-06	31.79	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of Carg11687 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CD17\|A0A1S3CD17_CUCME	2.1e-74	74.88	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
tr\|A0A0A0LK21\|A0A0A0LK21_CUCSA	7.5e-72	73.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1	[more]
tr\|A0A2P5E9J1\|A0A2P5E9J1_9ROSA	4.0e-41	57.35	VQ motif containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220060 PE...	[more]
tr\|W0TUF0\|W0TUF0_ACAMN	1.6e-37	50.91	Map kinase substrate OS=Acacia mangium OX=224085 PE=2 SV=1	[more]
tr\|A0A1S2YG04\|A0A1S2YG04_CICAR	3.5e-37	50.45	protein MKS1 OS=Cicer arietinum OX=3827 GN=LOC101495567 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11687-RA	Carg11687-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 6.8E-10 score: 38.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 14..215
None	No IPR available	PANTHER	PTHR33143:SF26	F16F4.1 PROTEIN	coord: 14..215

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11687	Cla007798	Watermelon (97103) v1	carwmB1056
Carg11687	Csa2G302100	Cucumber (Chinese Long) v2	carcuB1069
Carg11687	MELO3C023257	Melon (DHL92) v3.5.1	carmeB1026
Carg11687	ClCG02G000620	Watermelon (Charleston Gray)	carwcgB1030
Carg11687	CSPI02G15600	Wild cucumber (PI 183967)	carcpiB1092
Carg11687	Cucsa.249990	Cucumber (Gy14) v1	carcgyB1175
Carg11687	CmaCh02G006220	Cucurbita maxima (Rimu)	carcmaB1466
Carg11687	CmaCh20G010680	Cucurbita maxima (Rimu)	carcmaB1464
Carg11687	CmoCh02G006260	Cucurbita moschata (Rifu)	carcmoB1422
Carg11687	CmoCh20G010760	Cucurbita moschata (Rifu)	carcmoB1419
Carg11687	Lsi10G007140	Bottle gourd (USVL1VR-Ls)	carlsiB962
Carg11687	Cp4.1LG16g00810	Cucurbita pepo (Zucchini)	carcpeB1472
Carg11687	Cp4.1LG05g10550	Cucurbita pepo (Zucchini)	carcpeB1476
Carg11687	CsGy2G015570	Cucumber (Gy14) v2	carcgybB1038
Carg11687	MELO3C023257.2	Melon (DHL92) v3.6.1	carmedB1039
Carg11687	CsaV3_2G018150	Cucumber (Chinese Long) v3	carcucB1102
Carg11687	Cla97C02G026890	Watermelon (97103) v2	carwmbB1117
Carg11687	Bhi10G001326	Wax gourd	carwgoB1241

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11687	Carg24324	Silver-seed gourd	carcarB589

The following block(s) are covering this gene:

None