CsaV3_1G017310 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G017310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 11855391 .. 11856487 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGCTATAAAAAAACAACAGCATAGTTAATCATTTTTGTTGAAGTGAATCCCTAAGAAATCTCTGGACATAATATGCAAGAAAAGCCAAAGAGAACAAGAAAGAACTAAAGAAGAACAAAAAAGTGATTGTAAAAAACAAAATCCTCCACTAAATTACAACCAATACAAATCAAGAATAAAAAAAACTAAGTGATTCCTTGCAACTAACATGAATCTCTATACTCTCTAGCCTCTTAGACCTCTCCGTCCAAAATTCCTTTACTTATCGCCATTTTCCCTCTCGAACAAACTTCACTTGCTCTTTGCCCATCTCCCATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGTAAGCCCAAAAAACCCTAGTCTGATTTCGGAAATTATGTCCACTGCGATTCTCTCTGTTTTTCTTTTTTTTTTTTTTTTTGAAAAAATAGGGCTCGGATTTGCAGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAGTTTATAGTTGGGAAACTATGAACATACCCTCTAAACTTTGTAGTTAAATTTGAAACAACTCTTAAAAAGATTAAGAACAAAATGAAAAAATATTTACTCCATGTAACACAAAAGAATTTCATCACGTTCAATTTGTCATTATTGGTTTTGAATTTTTCGTATGAATATTGAATT

mRNA sequence

ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG

Coding sequence (CDS)

ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG

Protein sequence

MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
BLAST of CsaV3_1G017310 vs. NCBI nr
Match: XP_011655111.1 (PREDICTED: uncharacterized protein LOC105435481 isoform X2 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-91
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL 60
           MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL
Sbjct: 1   MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL 60

Query: 61  ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH 120
           ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH
Sbjct: 61  ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH 120

Query: 121 GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166

BLAST of CsaV3_1G017310 vs. NCBI nr
Match: XP_011655106.1 (PREDICTED: uncharacterized protein LOC105435481 isoform X1 [Cucumis sativus] >KGN65070.1 hypothetical protein Csa_1G191690 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD-----GYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
           MGANLCTIRCPGTADASGD     GYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL
Sbjct: 1   MGANLCTIRCPGTADASGDGLGFAGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60

Query: 61  EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
           EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED
Sbjct: 61  EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120

Query: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 171

BLAST of CsaV3_1G017310 vs. NCBI nr
Match: XP_008458959.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 1.4e-77
Identity = 149/169 (88.17%), Postives = 154/169 (91.12%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEK---KEFMSLEE 60
           MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEK   KEFMSLEE
Sbjct: 37  MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 96

Query: 61  LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
           LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 97  LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 156

Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           SSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 205

BLAST of CsaV3_1G017310 vs. NCBI nr
Match: XP_008458958.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 1.0e-75
Identity = 149/174 (85.63%), Postives = 154/174 (88.51%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD-----GYEICGWRRRHWWRRERNDVKRELEASIEK---KEF 60
           MGANLCTIR P TADASGD     GYEICGWRRR WWRRERN+VKRELEASIEK   KEF
Sbjct: 37  MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96

Query: 61  MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
           MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97  MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156

Query: 121 AEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           A+DEYSSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210

BLAST of CsaV3_1G017310 vs. NCBI nr
Match: XP_016902355.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X1 [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 2.2e-75
Identity = 149/177 (84.18%), Postives = 154/177 (87.01%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD--------GYEICGWRRRHWWRRERNDVKRELEASIEK--- 60
           MGANLCTIR P TADASGD        GYEICGWRRR WWRRERN+VKRELEASIEK   
Sbjct: 37  MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 96

Query: 61  KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
           KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 97  KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 156

Query: 121 KSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           +SVA+DEYSSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 213

BLAST of CsaV3_1G017310 vs. TrEMBL
Match: tr|A0A0A0LT52|A0A0A0LT52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89
Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD-----GYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
           MGANLCTIRCPGTADASGD     GYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL
Sbjct: 1   MGANLCTIRCPGTADASGDGLGFAGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60

Query: 61  EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
           EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED
Sbjct: 61  EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120

Query: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 171

BLAST of CsaV3_1G017310 vs. TrEMBL
Match: tr|A0A1S3CAA9|A0A1S3CAA9_CUCME (uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.3e-78
Identity = 149/169 (88.17%), Postives = 154/169 (91.12%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEK---KEFMSLEE 60
           MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEK   KEFMSLEE
Sbjct: 37  MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 96

Query: 61  LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
           LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 97  LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 156

Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           SSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 205

BLAST of CsaV3_1G017310 vs. TrEMBL
Match: tr|A0A1S3C9M5|A0A1S3C9M5_CUCME (uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.7e-76
Identity = 149/174 (85.63%), Postives = 154/174 (88.51%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD-----GYEICGWRRRHWWRRERNDVKRELEASIEK---KEF 60
           MGANLCTIR P TADASGD     GYEICGWRRR WWRRERN+VKRELEASIEK   KEF
Sbjct: 37  MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96

Query: 61  MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
           MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97  MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156

Query: 121 AEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           A+DEYSSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 210

BLAST of CsaV3_1G017310 vs. TrEMBL
Match: tr|A0A1S4E301|A0A1S4E301_CUCME (uncharacterized protein LOC103498217 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 149/177 (84.18%), Postives = 154/177 (87.01%), Query Frame = 0

Query: 1   MGANLCTIRCPGTADASGD--------GYEICGWRRRHWWRRERNDVKRELEASIEK--- 60
           MGANLCTIR P TADASGD        GYEICGWRRR WWRRERN+VKRELEASIEK   
Sbjct: 37  MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 96

Query: 61  KEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
           KEFMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 97  KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 156

Query: 121 KSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 167
           +SVA+DEYSSH GFPIC  +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV S
Sbjct: 157 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNVVS 213

BLAST of CsaV3_1G017310 vs. TrEMBL
Match: tr|A0A0D2SYU1|A0A0D2SYU1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G250400 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.5e-06
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 0

Query: 44  EASIEKKEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHP-ARILECSSACD 103
           E   + ++ ++LE+ LLASPG P +  F N GE  V +   F ++VHP +  +E     +
Sbjct: 60  ERVTKARKLLTLEDWLLASPGGPLKDYF-NGGELYVFKQ--FNKRVHPSSSSMEIEPRVN 119

Query: 104 ERSGFVGKSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPS 153
           +  GF     +  + S    F    SQSGK KKKVSFRLPE +D++V  S
Sbjct: 120 DHDGFSVDLSSSVDVSGCSSF--SRSQSGKSKKKVSFRLPEEADIMVFYS 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655111.12.2e-91100.00PREDICTED: uncharacterized protein LOC105435481 isoform X2 [Cucumis sativus][more]
XP_011655106.11.6e-8997.08PREDICTED: uncharacterized protein LOC105435481 isoform X1 [Cucumis sativus] >KG... [more]
XP_008458959.11.4e-7788.17PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo][more]
XP_008458958.11.0e-7585.63PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo][more]
XP_016902355.12.2e-7584.18PREDICTED: uncharacterized protein LOC103498217 isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LT52|A0A0A0LT52_CUCSA1.1e-8997.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1[more]
tr|A0A1S3CAA9|A0A1S3CAA9_CUCME9.3e-7888.17uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3C9M5|A0A1S3C9M5_CUCME6.7e-7685.63uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4E301|A0A1S4E301_CUCME1.5e-7584.18uncharacterized protein LOC103498217 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0D2SYU1|A0A0D2SYU1_GOSRA9.5e-0638.18Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G250400 PE=4 ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G017310.1CsaV3_1G017310.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G017310Cucurbita moschata (Rifu)cmocucB0228
CsaV3_1G017310Wax gourdcucwgoB039