CsaV3_1G010900 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGTAGATGCAGATGGATGTTTCATAATCCTCAGAATATGTATCATGAGGTCAGGATCTGCAAGAGAAGCTAAAAGGCAGCTTTTCTTAAATTTGAGTTGTTCAATGTTGCTGGTGCTTTATATGGTTTGTGTTTCCAAATTCTATGAAGGAACTTCCTAGGATTTCCAAGCCACAGAGAAAGGGAACCAATTAGCTGTTTCAAGTTTCAATCATCAAGGTACAATCCAGTTTAGGAGAAAATATTCAATTGTATGGAAGAACTGTGGCTCTTCAGATGTTTCTCCTTGCAGGTCCATGAGACAGAGAAGAGAGAGGAAAAGAATTAGTGCAGAGATGTAATATAGTTGTGAAAAATATAAGAAATTCTTCAATTTTGTGATCTTCATTACACTTTCCTGCCTCCCCCATACACCTCAGATTCAAGAATGAGCAAACACAATTGTAACTGGCACTACAAACAACCCAGGATCTCACATATATTTACGTTAGTTTAAAAAAAACTACCTAGTGGCACTTTATTGTATTTTGAAACATTCTCTCTAAAAATATTAGTTCTCTTGGACACATGGTTCACCAAGTATATTTGTTTTCGTAGCAAATCAAAAAATTGAAGACATGCAGAAGAAACATAAGCATTTTATCAGGCAATTACTTGCTATCCAAATTCACCATCGCACAGAGGGAATATTTTGAATTATAACAAGAAAGATATGATTAAATCTGAAGACGCATAAAATCCAATGTTAAGTTTCATCTTTATTGACATACAAAATTGCTCAAAACAATCTAGCTTCCATCAATACAGCAATTACTAACCTAACAGGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG ATGGCTGCAATTGCTCCTGTTGCCATTGGAACTCGAGGAACCATTGGTTCACTCGTCAAGAAGGAAATAGATTATTTTGCCAAGATTGAGCTTGAAACCTCCATCAGCTCACAGAGGTCTCAAGGACCTGAAATGGCTTCGTCTGGCTGTAGAAGTTCACCACCCACCTTCTGGCAATCTTTAATGTCATGGCGAAGGAAGACGAAGCTAACCAGCAATCGCTTTGTTACAAAAATGTGCTCGACTTTTGATGCTTCGAGAAGCAATCGAATGAATAAGATTTCTGGGTTGAGTTATACGATCCTTCAGAATGATTTCCATAGCTTGCACATGAAGGTCAACGACAACATTTCAAGCACATTATCACCCTTCTTGAAGCAGGTCAGAGCCTACCAATAG MAAIAPVAIGTRGTIGSLVKKEIDYFAKIELETSISSQRSQGPEMASSGCRSSPPTFWQSLMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHMKVNDNISSTLSPFLKQVRAYQ
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: KGN64536.1 (hypothetical protein Csa_1G063600 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_011648422.1 (PREDICTED: uncharacterized protein LOC105434455 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 2.5e-53 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_016898893.1 (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 4.0e-51 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_022140128.1 (uncharacterized protein LOC111010862 [Momordica charantia]) HSP 1 Score: 138.3 bits (347), Expect = 1.9e-29 Identity = 75/112 (66.96%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. NCBI nr
Match: XP_023906764.1 (uncharacterized protein LOC112018468 [Quercus suber] >POF26798.1 hypothetical protein CFP56_47167 [Quercus suber]) HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21 Identity = 58/109 (53.21%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TAIR10
Match: AT4G21780.1 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09 Identity = 42/109 (38.53%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TrEMBL
Match: tr|A0A0A0LX43|A0A0A0LX43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.7e-53 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TrEMBL
Match: tr|A0A1S4DSE9|A0A1S4DSE9_CUCME (uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.7e-51 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TrEMBL
Match: tr|A0A2P4NAG5|A0A2P4NAG5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47167 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21 Identity = 58/109 (53.21%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TrEMBL
Match: tr|A0A2N9IT24|A0A2N9IT24_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55316 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.2e-20 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0
BLAST of CsaV3_1G010900 vs. TrEMBL
Match: tr|A0A2I4DEV5|A0A2I4DEV5_9ROSI (uncharacterized protein LOC108979453 OS=Juglans regia OX=51240 GN=LOC108979453 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.8e-19 Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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