CmoCh07G002930 (gene) Cucurbita moschata (Rifu)

NameCmoCh07G002930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBnaC01g13120D protein
LocationCmo_Chr07 : 1432278 .. 1432646 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA

mRNA sequence

ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA

Coding sequence (CDS)

ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA
BLAST of CmoCh07G002930 vs. TrEMBL
Match: A0A0A0KL84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G514830 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.5e-47
Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 1

Query: 1   MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDAS 60
           MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S  +SG+A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGISHTISGNAL 60

Query: 61  RRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTH 120
           RRSDS+ SFWLLSL+WKWKKR+ NNG+LPNI SAVE SKSNRFNGIPGFGYRILKDD   
Sbjct: 61  RRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFGYRILKDD--- 120

Query: 121 FPI 123
           FPI
Sbjct: 121 FPI 120

BLAST of CmoCh07G002930 vs. TrEMBL
Match: B9H1E3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01820g PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-27
Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 1

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQR----LSGD 61
           Y+  + ++ F E+M A AP+AIGTRGT+GSLV KEIEYF+K E++R   S++    ++  
Sbjct: 3   YKASTITTKFPEKMAATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADI 62

Query: 62  ASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
           AS    S+ SFW L++SWK KKRR ++G LP+ICSAVE++ SNR + IPGF YRILKDD
Sbjct: 63  ASSNGQSRPSFWSLTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILKDD 121

BLAST of CmoCh07G002930 vs. TrEMBL
Match: F6H7M7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00840 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-26
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGG--SQR------ 61
           Y+    ++   E M A AP+ +GTRGT+GSLVMKEIEYF++LEL+RHG   SQR      
Sbjct: 3   YKASCTATKCPERMAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVV 62

Query: 62  --LSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYR 118
              SG   R   S+  FW L ++W+ KKRR++   LP+ICS VE++ S+R NGIPGF YR
Sbjct: 63  DVASGSTGR---SRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFNYR 122

BLAST of CmoCh07G002930 vs. TrEMBL
Match: A5C4M7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030805 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-26
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGG--SQR------ 61
           Y+    ++   E M A AP+ +GTRGT+GSLVMKEIEYF++LEL+RHG   SQR      
Sbjct: 3   YKASCTATKCPERMAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVV 62

Query: 62  --LSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYR 118
              SG   R   S+  FW L ++W+ KKRR++   LP+ICS VE++ S+R NGIPGF YR
Sbjct: 63  DVASGSTGR---SRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFNYR 122

BLAST of CmoCh07G002930 vs. TrEMBL
Match: A9P9Y1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.5e-26
Identity = 62/106 (58.49%), Postives = 80/106 (75.47%), Query Frame = 1

Query: 15  MGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQR----LSGDASRRSDSKTSFWL 74
           M A AP+AIGTRGT+GSLV KEIEYF+K E++R   S++    ++  AS    S+ SFW 
Sbjct: 1   MAATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADIASSNGQSRPSFWS 60

Query: 75  LSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
           L++SWK KKRR ++G LP+ICSAVE++ SNR + IPGF YRILKDD
Sbjct: 61  LTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILKDD 106

BLAST of CmoCh07G002930 vs. TAIR10
Match: AT4G21780.1 (AT4G21780.1 unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-17
Identity = 49/109 (44.95%), Postives = 61/109 (55.96%), Query Frame = 1

Query: 19  APLAIGTRGTMGSLVMKEIEYFTKLEL------ERHGGSQRLSGDASR--RSDSKTSFWL 78
           AP+AIGTRGT+GSLV KEI+YF            R G S+       +  RS S+   W 
Sbjct: 3   APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62

Query: 79  LSLSWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
               W+ KKR+T  G     P++CSAVE+S  NR   +PGF YRILK D
Sbjct: 63  SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108

BLAST of CmoCh07G002930 vs. NCBI nr
Match: gi|778722526|ref|XP_011658506.1| (PREDICTED: uncharacterized protein LOC105436036 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-47
Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 1

Query: 1   MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDAS 60
           MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S  +SG+A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGISHTISGNAL 60

Query: 61  RRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTH 120
           RRSDS+ SFWLLSL+WKWKKR+ NNG+LPNI SAVE SKSNRFNGIPGFGYRILKDD   
Sbjct: 61  RRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFGYRILKDD--- 120

Query: 121 FPI 123
           FPI
Sbjct: 121 FPI 120

BLAST of CmoCh07G002930 vs. NCBI nr
Match: gi|659081006|ref|XP_008441098.1| (PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-47
Identity = 100/123 (81.30%), Postives = 108/123 (87.80%), Query Frame = 1

Query: 1   MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDAS 60
           MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFT LELERHG S  + G+A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNAL 60

Query: 61  RRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTH 120
           RRSDSK SFWLLSL+WKWKKR+ NNGILPNI SAVE SKSNRFNGIPGFGYRILKDD   
Sbjct: 61  RRSDSKGSFWLLSLTWKWKKRKNNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDD--- 120

Query: 121 FPI 123
           FPI
Sbjct: 121 FPI 120

BLAST of CmoCh07G002930 vs. NCBI nr
Match: gi|1009108313|ref|XP_015884100.1| (PREDICTED: uncharacterized protein LOC107419798 [Ziziphus jujuba])

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-28
Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 1

Query: 8   SSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQR-----LSGDASRRS 67
           ++ F+E M A APLAIGTRGT+GSLV KEIEYFTKLEL+R+G S++     +   +  RS
Sbjct: 16  TTKFTEIMAAAAPLAIGTRGTVGSLVRKEIEYFTKLELDRNGSSRKPRSHVVDMGSCGRS 75

Query: 68  DSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHFPI 123
           +S++ FW L+++WK KK + + G LP ICS  E+S++NR NGI GF Y ILKDDV +F +
Sbjct: 76  NSRSGFWFLTMTWKRKKPKVSRGFLPRICSVSEVSETNRLNGISGFNYMILKDDVKYFDV 135

BLAST of CmoCh07G002930 vs. NCBI nr
Match: gi|566164423|ref|XP_002305590.2| (hypothetical protein POPTR_0004s01820g [Populus trichocarpa])

HSP 1 Score: 131.0 bits (328), Expect = 1.5e-27
Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 1

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQR----LSGD 61
           Y+  + ++ F E+M A AP+AIGTRGT+GSLV KEIEYF+K E++R   S++    ++  
Sbjct: 3   YKASTITTKFPEKMAATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADI 62

Query: 62  ASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
           AS    S+ SFW L++SWK KKRR ++G LP+ICSAVE++ SNR + IPGF YRILKDD
Sbjct: 63  ASSNGQSRPSFWSLTMSWKRKKRRGSSGFLPSICSAVEVADSNRLSRIPGFSYRILKDD 121

BLAST of CmoCh07G002930 vs. NCBI nr
Match: gi|147833189|emb|CAN68638.1| (hypothetical protein VITISV_030805 [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-25
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGG--SQR------ 61
           Y+    ++   E M A AP+ +GTRGT+GSLVMKEIEYF++LEL+RHG   SQR      
Sbjct: 3   YKASCTATKCPERMAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVV 62

Query: 62  --LSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYR 118
              SG   R   S+  FW L ++W+ KKRR++   LP+ICS VE++ S+R NGIPGF YR
Sbjct: 63  DVASGSTGR---SRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVADSHRLNGIPGFNYR 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KL84_CUCSA1.5e-4781.30Uncharacterized protein OS=Cucumis sativus GN=Csa_6G514830 PE=4 SV=1[more]
B9H1E3_POPTR1.0e-2754.62Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01820g PE=4 SV=1[more]
F6H7M7_VITVI7.3e-2652.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g00840 PE=4 SV=... [more]
A5C4M7_VITVI7.3e-2652.38Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030805 PE=4 SV=1[more]
A9P9Y1_POPTR9.5e-2658.49Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT4G21780.17.2e-1744.95 unknown protein[more]
Match NameE-valueIdentityDescription
gi|778722526|ref|XP_011658506.1|2.2e-4781.30PREDICTED: uncharacterized protein LOC105436036 [Cucumis sativus][more]
gi|659081006|ref|XP_008441098.1|2.2e-4781.30PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo][more]
gi|1009108313|ref|XP_015884100.1|1.7e-2854.17PREDICTED: uncharacterized protein LOC107419798 [Ziziphus jujuba][more]
gi|566164423|ref|XP_002305590.2|1.5e-2754.62hypothetical protein POPTR_0004s01820g [Populus trichocarpa][more]
gi|147833189|emb|CAN68638.1|1.0e-2552.38hypothetical protein VITISV_030805 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0050665 hydrogen peroxide biosynthetic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0016926 protein desumoylation
biological_process GO:0009620 response to fungus
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016780 phosphotransferase activity, for other substituted phosphate groups
molecular_function GO:0047714 galactolipase activity
molecular_function GO:0004620 phospholipase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G002930.1CmoCh07G002930.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35131FAMILY NOT NAMEDcoord: 1..120
score: 8.6
NoneNo IPR availablePANTHERPTHR35131:SF1SUBFAMILY NOT NAMEDcoord: 1..120
score: 8.6

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh07G002930Cucsa.045320Cucumber (Gy14) v1cgycmoB0043
CmoCh07G002930CmaCh13G007280Cucurbita maxima (Rimu)cmacmoB240
CmoCh07G002930CmaCh03G005310Cucurbita maxima (Rimu)cmacmoB667
CmoCh07G002930CmaCh07G003040Cucurbita maxima (Rimu)cmacmoB875
CmoCh07G002930Cla014461Watermelon (97103) v1cmowmB816
CmoCh07G002930Cla019394Watermelon (97103) v1cmowmB810
CmoCh07G002930Csa1G063600Cucumber (Chinese Long) v2cmocuB835
CmoCh07G002930Csa6G514830Cucumber (Chinese Long) v2cmocuB865
CmoCh07G002930MELO3C002469Melon (DHL92) v3.5.1cmomeB772
CmoCh07G002930MELO3C007381Melon (DHL92) v3.5.1cmomeB782
CmoCh07G002930ClCG01G022080Watermelon (Charleston Gray)cmowcgB755
CmoCh07G002930ClCG03G004870Watermelon (Charleston Gray)cmowcgB761
CmoCh07G002930CSPI01G10840Wild cucumber (PI 183967)cmocpiB845
CmoCh07G002930CSPI06G33660Wild cucumber (PI 183967)cmocpiB873
CmoCh07G002930Lsi01G004160Bottle gourd (USVL1VR-Ls)cmolsiB774
CmoCh07G002930Cp4.1LG09g09010Cucurbita pepo (Zucchini)cmocpeB799
CmoCh07G002930Cp4.1LG19g07760Cucurbita pepo (Zucchini)cmocpeB817
CmoCh07G002930MELO3C007381.2Melon (DHL92) v3.6.1cmomedB886
CmoCh07G002930MELO3C002469.2Melon (DHL92) v3.6.1cmomedB875
CmoCh07G002930CsaV3_6G049140Cucumber (Chinese Long) v3cmocucB1019
CmoCh07G002930CsaV3_1G010900Cucumber (Chinese Long) v3cmocucB0989
CmoCh07G002930Cla97C01G021730Watermelon (97103) v2cmowmbB849
CmoCh07G002930Cla97C03G056020Watermelon (97103) v2cmowmbB858
CmoCh07G002930Bhi03G000434Wax gourdcmowgoB1051
CmoCh07G002930CsGy6G033200Cucumber (Gy14) v2cgybcmoB843
CmoCh07G002930CsGy1G010720Cucumber (Gy14) v2cgybcmoB133
CmoCh07G002930Carg07536Silver-seed gourdcarcmoB1355
CmoCh07G002930Carg13706Silver-seed gourdcarcmoB1250
CmoCh07G002930Carg07833Silver-seed gourdcarcmoB0888
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh07G002930CmoCh13G007560Cucurbita moschata (Rifu)cmocmoB190
CmoCh07G002930CmoCh18G002810Cucurbita moschata (Rifu)cmocmoB349
CmoCh07G002930CmoCh03G005530Cucurbita moschata (Rifu)cmocmoB455