CmoCh18G002810 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTACTGTAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTATGCCAAGATTGAGCTTGAAAGATGCTGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTTGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCAAAAATGAATAAGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTTCACATGTAGATGATGCTTCATAATCCTCAGAATACTGGACTCAGGGATTTGCAAGAGAAGCTACCAAGCAGCTTCCTGCTGCTGATGCTTGTTAGGATTTGTGTTTCCTAATTCTAAAGGAAACTTCCTAGGATCCCATCCAGACAGGAACCAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCCAACTTTTCTACAGGGAGGTTTGGAGAAAATCAACTTTTCTATAGGGAGGTTTGTTCCTGCAATTGTATGTTTGAAAATATATGAAGTTTTTCGATAACGTCTCATCCCACCCACCCCCAAGTCAAAATGTACGTAAGGATGAACATGTGAGATCACATATTGGTTAGAGAGGGAACAAAAATATTCCTTATAAAGATGTGGAAACCTCTCCCTAACAAAGACATTCTAAAAACCGTGAGGCTAACGGCGATACATAACGGGTCAAAGCAAACAATATCGGCTCGCAATTGACTTAGGATTATTACAAATGGTATCAAAGCTCAACAACAGACGGTGTGCCAGAGAGGATGCTCAAAGGGAGATGAATTGTGAGATCCCAGGTCGGTTGGTGAGGGGAACGAAATATTCCTCATAAATGTGTGGAAACCTCTCCCTAACAAACGCATTTTAAAAACTGTAAAGCTGACAGCGATACGTAACGGGTCAAAGTGGACAAAATATGAACTTGAACCACCACAAACCAAAAACTAATGTCAAGTTTCTCACTTTATTGTCAAGTTTCCATCAATACATAAAGTACTAACCTAACAGGAACAGCCACCACAACAATTCAAGCCCACATCTCTCCTCTTCTATTAGCAGATCCAAACCTACCAATAGGGAGCGGACTCATTCAACAAAAGCATTACAAATTTCAACCAGCGCAAAAGCTAGAACATTAAACTTGACAATGGAATTCCTCGTCTGTAGAACAAGAACAAAATGA ATGGCTGCTACTGTAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTATGCCAAGATTGAGCTTGAAAGATGCTGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTTGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCAAAAATGAATAAGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTTCACATGAACAGCCACCACAACAATTCAAGCCCACATCTCTCCTCTTCTATTAGCAGATCCAAACCTACCAATAGGGAGCGGACTCATTCAACAAAAGCATTACAAATTTCAACCAGCGCAAAAGCTAGAACATTAAACTTGACAATGGAATTCCTCGTCTGTAGAACAAGAACAAAATGA ATGGCTGCTACTGTAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTATGCCAAGATTGAGCTTGAAAGATGCTGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTTGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCAAAAATGAATAAGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTTCACATGAACAGCCACCACAACAATTCAAGCCCACATCTCTCCTCTTCTATTAGCAGATCCAAACCTACCAATAGGGAGCGGACTCATTCAACAAAAGCATTACAAATTTCAACCAGCGCAAAAGCTAGAACATTAAACTTGACAATGGAATTCCTCGTCTGTAGAACAAGAACAAAATGA
BLAST of CmoCh18G002810 vs. TrEMBL
Match: A0A0A0LX43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G063600 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-27 Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 1
BLAST of CmoCh18G002810 vs. TrEMBL
Match: I1M118_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G206400 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.9e-16 Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 1
BLAST of CmoCh18G002810 vs. TrEMBL
Match: B9H1E3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s01820g PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
BLAST of CmoCh18G002810 vs. TrEMBL
Match: A9P9Y1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
BLAST of CmoCh18G002810 vs. TrEMBL
Match: A0A067JDG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21244 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.9e-14 Identity = 54/103 (52.43%), Postives = 64/103 (62.14%), Query Frame = 1
BLAST of CmoCh18G002810 vs. TAIR10
Match: AT4G21780.1 (AT4G21780.1 unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 4.3e-09 Identity = 41/113 (36.28%), Postives = 59/113 (52.21%), Query Frame = 1
BLAST of CmoCh18G002810 vs. NCBI nr
Match: gi|659067770|ref|XP_008441210.1| (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28 Identity = 72/112 (64.29%), Postives = 81/112 (72.32%), Query Frame = 1
BLAST of CmoCh18G002810 vs. NCBI nr
Match: gi|778664866|ref|XP_011648422.1| (PREDICTED: uncharacterized protein LOC105434455 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27 Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 1
BLAST of CmoCh18G002810 vs. NCBI nr
Match: gi|700209440|gb|KGN64536.1| (hypothetical protein Csa_1G063600 [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-27 Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 1
BLAST of CmoCh18G002810 vs. NCBI nr
Match: gi|356548977|ref|XP_003542875.1| (PREDICTED: uncharacterized protein LOC100803137 [Glycine max]) HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15 Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 1
BLAST of CmoCh18G002810 vs. NCBI nr
Match: gi|566164423|ref|XP_002305590.2| (hypothetical protein POPTR_0004s01820g [Populus trichocarpa]) HSP 1 Score: 87.0 bits (214), Expect = 3.2e-14 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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