Carg07833 (gene) Silver-seed gourd

NameCarg07833
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDelta-hexatoxin-Mg1a like
LocationCucurbita_argyrosperma_scaffold_066 : 416880 .. 417248 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA

mRNA sequence

ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA

Coding sequence (CDS)

ATGTATGAAGGCATCAGCAGAAGCAGTAGCTTCTCTGAGGAAATGGGTGCTGTTGCTCCACTTGCAATCGGCACGCGAGGCACTATGGGGTCGCTGGTTATGAAGGAGATTGAGTACTTCACCAAGCTAGAGCTCGAACGCCATGGCGGCTCTCAGCGGTTAAGTGGAGATGCTTCCAGGAGAAGCGATTCGAAGACAAGCTTTTGGCTTTTGTCGTTGAGTTGGAAGTGGAAGAAGAGAAGAACCAACAATGGGATTCTCCCCAACATTTGCTCTGCTGTCGAATTGTCAAAAAGCAATCGGTTTAATGGGATTCCTGGTTTTGGTTACAGGATTCTCAAAGACGATGTCACCCACTTTCCCATTTGA

Protein sequence

MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHFPI
BLAST of Carg07833 vs. NCBI nr
Match: XP_022926407.1 (uncharacterized protein LOC111433571 [Cucurbita moschata])

HSP 1 Score: 249.2 bits (635), Expect = 7.1e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
           MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120
           RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120

Query: 121 PI 123
           PI
Sbjct: 121 PI 122

BLAST of Carg07833 vs. NCBI nr
Match: XP_023003961.1 (uncharacterized protein LOC111497407 [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-62
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
           MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR
Sbjct: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120
           RSDS+TSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDD+THF
Sbjct: 61  RSDSRTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDITHF 120

Query: 121 PI 123
           PI
Sbjct: 121 PI 122

BLAST of Carg07833 vs. NCBI nr
Match: XP_023518155.1 (uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.3 bits (630), Expect = 2.7e-62
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
           MYEGISRSSSF EEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR
Sbjct: 1   MYEGISRSSSFCEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60

Query: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120
           RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF
Sbjct: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120

Query: 121 PI 123
           PI
Sbjct: 121 PI 122

BLAST of Carg07833 vs. NCBI nr
Match: XP_022142335.1 (uncharacterized protein LOC111012477 [Momordica charantia])

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
           MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASR
Sbjct: 1   MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASR 60

Query: 61  RSDSKTSFWLLSLSWKWKKRR--TNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVT 120
           R DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSKSNRFNGIPGFGYRILK+DV 
Sbjct: 61  RGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGFGYRILKEDVN 120

Query: 121 HFPI 123
           +F I
Sbjct: 121 YFTI 124

BLAST of Carg07833 vs. NCBI nr
Match: XP_022977336.1 (uncharacterized protein LOC111477686 [Cucurbita maxima])

HSP 1 Score: 203.0 bits (515), Expect = 5.9e-49
Identity = 99/122 (81.15%), Postives = 109/122 (89.34%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDASR 60
           MY+G+SRS SFSE+M  +APLAIGTRGT+GSLVMKEIEYFTK E+ERHG SQR+SGDASR
Sbjct: 1   MYKGMSRSRSFSEKMDGIAPLAIGTRGTVGSLVMKEIEYFTKFEVERHGSSQRISGDASR 60

Query: 61  RSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTHF 120
           RSD K SFWL+SL+WKWKKR+ NNGILPNICSAVELSKSNRFNGIPGF YRILK D   F
Sbjct: 61  RSDCKGSFWLVSLTWKWKKRKGNNGILPNICSAVELSKSNRFNGIPGFSYRILKHD---F 119

Query: 121 PI 123
           PI
Sbjct: 121 PI 119

BLAST of Carg07833 vs. TAIR10
Match: AT4G21780.1 (unknown protein)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-17
Identity = 49/109 (44.95%), Postives = 61/109 (55.96%), Query Frame = 0

Query: 19  APLAIGTRGTMGSLVMKEIEYFTKLEL------ERHGGSQRLSGDASR--RSDSKTSFWL 78
           AP+AIGTRGT+GSLV KEI+YF            R G S+       +  RS S+   W 
Sbjct: 3   APIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGSWF 62

Query: 79  LSLSWKWKKRRTNNG---ILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
               W+ KKR+T  G     P++CSAVE+S  NR   +PGF YRILK D
Sbjct: 63  SKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENR---VPGFNYRILKSD 108

BLAST of Carg07833 vs. TrEMBL
Match: tr|A0A1S3B3D8|A0A1S3B3D8_CUCME (uncharacterized protein LOC103485325 OS=Cucumis melo OX=3656 GN=LOC103485325 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 100/123 (81.30%), Postives = 108/123 (87.80%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDAS 60
           MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFT LELERHG S  + G+A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTIRGNAL 60

Query: 61  RRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTH 120
           RRSDSK SFWLLSL+WKWKKR+ NNGILPNI SAVE SKSNRFNGIPGFGYRILKDD   
Sbjct: 61  RRSDSKGSFWLLSLTWKWKKRKNNNGILPNISSAVEFSKSNRFNGIPGFGYRILKDD--- 120

Query: 121 FPI 123
           FPI
Sbjct: 121 FPI 120

BLAST of Carg07833 vs. TrEMBL
Match: tr|A0A0A0KL84|A0A0A0KL84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514830 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 100/123 (81.30%), Postives = 110/123 (89.43%), Query Frame = 0

Query: 1   MYEGISRSSSFSEEM-GAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGDAS 60
           MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFTKLELERHG S  +SG+A 
Sbjct: 1   MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGISHTISGNAL 60

Query: 61  RRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDDVTH 120
           RRSDS+ SFWLLSL+WKWKKR+ NNG+LPNI SAVE SKSNRFNGIPGFGYRILKDD   
Sbjct: 61  RRSDSRGSFWLLSLTWKWKKRKGNNGVLPNISSAVEFSKSNRFNGIPGFGYRILKDD--- 120

Query: 121 FPI 123
           FPI
Sbjct: 121 FPI 120

BLAST of Carg07833 vs. TrEMBL
Match: tr|A0A2P4NAG5|A0A2P4NAG5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47167 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 63/119 (52.94%), Postives = 88/119 (73.95%), Query Frame = 0

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSGD---- 61
           Y+  + S+   E+M A+AP+AIGTRGT+GSLV KEIEYF+K+E+++ G S++  G     
Sbjct: 3   YKATTTSTKLPEKMAAIAPVAIGTRGTVGSLVRKEIEYFSKVEIDQCGSSRKPQGQIVDM 62

Query: 62  ASRRSDSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILKDD 117
           AS    SK  FW L ++W+ KKRR ++GILP++CS VE+S+SNR N IPG+ YRILK+D
Sbjct: 63  ASTSGHSKPGFWFLIMTWRRKKRRNSSGILPSMCSVVEVSESNRLNRIPGYNYRILKND 121

BLAST of Carg07833 vs. TrEMBL
Match: tr|A0A2C9U4J3|A0A2C9U4J3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G037200 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 67/122 (54.92%), Postives = 91/122 (74.59%), Query Frame = 0

Query: 2   YEGISRSSSFSEEMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSG---DA 61
           Y+  + +++F E+M A  P+AIGTRGT+GSL+ KEIEYFTK+EL+R   S+R  G   D 
Sbjct: 3   YKARTITTTFPEKMSASTPVAIGTRGTVGSLLRKEIEYFTKIELDRCASSRRTRGQMVDM 62

Query: 62  SRRSD---SKTSFWLLSLSWKWKKRRTNNGI-LPNICSAVELSKSNRFNGIPGFGYRILK 117
           + RS+   S+ SFW LSL+WK KKRR N+ + LP+ICSAVE++ +NR NGIPGF Y+IL 
Sbjct: 63  ASRSEHSISRPSFWSLSLNWKRKKRRGNSSVFLPSICSAVEVADTNRLNGIPGFSYKILT 122

BLAST of Carg07833 vs. TrEMBL
Match: tr|A0A2P6Q2X9|A0A2P6Q2X9_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0003701 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.6e-26
Identity = 66/128 (51.56%), Postives = 87/128 (67.97%), Query Frame = 0

Query: 2   YEGISRSSSFSE--EMGAVAPLAIGTRGTMGSLVMKEIEYFTKLELERHGGSQRLSG--- 61
           Y+  +  + F E  +M A AP+AIGTRGT+GSLV +EIEYF KLEL+R G S +  G   
Sbjct: 3   YKASTTEAKFPETRKMAARAPVAIGTRGTVGSLVRREIEYFGKLELDRRGSSVKPRGKMV 62

Query: 62  DASRRS--DSKTSFWLLSLSWKWKKRRTNNGILPNICSAVELSKSNRFNGIPGFGYRILK 121
           D S R+   S+ SFW L ++WKWK++R +   L NICSA E+ ++NR NGIPGF YR LK
Sbjct: 63  DMSSRNCDSSRPSFWFLRMTWKWKRQRGSRRFLSNICSAAEVVENNRLNGIPGFNYRSLK 122

Query: 122 DDVTHFPI 123
           DD+ +  I
Sbjct: 123 DDIDNLSI 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022926407.17.1e-63100.00uncharacterized protein LOC111433571 [Cucurbita moschata][more]
XP_023003961.12.1e-6298.36uncharacterized protein LOC111497407 [Cucurbita maxima][more]
XP_023518155.12.7e-6299.18uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo][more]
XP_022142335.11.4e-5082.26uncharacterized protein LOC111012477 [Momordica charantia][more]
XP_022977336.15.9e-4981.15uncharacterized protein LOC111477686 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT4G21780.17.2e-1744.95unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3B3D8|A0A1S3B3D8_CUCME2.8e-4781.30uncharacterized protein LOC103485325 OS=Cucumis melo OX=3656 GN=LOC103485325 PE=... [more]
tr|A0A0A0KL84|A0A0A0KL84_CUCSA2.8e-4781.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G514830 PE=4 SV=1[more]
tr|A0A2P4NAG5|A0A2P4NAG5_QUESU1.1e-2752.94Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_47167 PE=4 SV=1[more]
tr|A0A2C9U4J3|A0A2C9U4J3_MANES1.6e-2654.92Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G037200 PE=4 SV=... [more]
tr|A0A2P6Q2X9|A0A2P6Q2X9_ROSCH4.6e-2651.56Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0003701 PE=4... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07833-RACarg07833-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35131FAMILY NOT NAMEDcoord: 5..120

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg07833Cla019394Watermelon (97103) v1carwmB0641
Carg07833Cla014461Watermelon (97103) v1carwmB0642
Carg07833Csa6G514830Cucumber (Chinese Long) v2carcuB0663
Carg07833Csa1G063600Cucumber (Chinese Long) v2carcuB0661
Carg07833MELO3C007381Melon (DHL92) v3.5.1carmeB0642
Carg07833MELO3C002469Melon (DHL92) v3.5.1carmeB0639
Carg07833ClCG03G004870Watermelon (Charleston Gray)carwcgB0626
Carg07833ClCG01G022080Watermelon (Charleston Gray)carwcgB0623
Carg07833CSPI01G10840Wild cucumber (PI 183967)carcpiB0670
Carg07833CSPI06G33660Wild cucumber (PI 183967)carcpiB0672
Carg07833Cucsa.045320Cucumber (Gy14) v1carcgyB0714
Carg07833CmaCh13G007280Cucurbita maxima (Rimu)carcmaB0906
Carg07833CmaCh07G003040Cucurbita maxima (Rimu)carcmaB0914
Carg07833CmaCh03G005310Cucurbita maxima (Rimu)carcmaB0912
Carg07833CmoCh13G007560Cucurbita moschata (Rifu)carcmoB0882
Carg07833CmoCh07G002930Cucurbita moschata (Rifu)carcmoB0888
Carg07833CmoCh18G002810Cucurbita moschata (Rifu)carcmoB0883
Carg07833CmoCh03G005530Cucurbita moschata (Rifu)carcmoB0886
Carg07833Lsi01G004160Bottle gourd (USVL1VR-Ls)carlsiB585
Carg07833Lsi02G006130Bottle gourd (USVL1VR-Ls)carlsiB587
Carg07833Cp4.1LG19g07760Cucurbita pepo (Zucchini)carcpeB0915
Carg07833Cp4.1LG09g09010Cucurbita pepo (Zucchini)carcpeB0911
Carg07833CsGy1G010720Cucumber (Gy14) v2carcgybB0637
Carg07833CsGy6G033200Cucumber (Gy14) v2carcgybB0640
Carg07833MELO3C007381.2Melon (DHL92) v3.6.1carmedB0652
Carg07833MELO3C002469.2Melon (DHL92) v3.6.1carmedB0649
Carg07833CsaV3_6G049140Cucumber (Chinese Long) v3carcucB0674
Carg07833CsaV3_1G010900Cucumber (Chinese Long) v3carcucB0672
Carg07833Cla97C01G021730Watermelon (97103) v2carwmbB0669
Carg07833Cla97C03G056020Watermelon (97103) v2carwmbB0672
Carg07833Bhi03G000434Wax gourdcarwgoB0759
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg07833Carg13706Silver-seed gourdcarcarB563
Carg07833Carg07536Silver-seed gourdcarcarB565