CsaV3_1G008840 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTAACAACGGAGAATTGAATTGGTGATCATAAACGAATGATCTAAATTTAGAGAGAAGAAGAAGAGTGAAGAAGAAGAAAGTAGAACAAAAATCCAAATGTAAGGTCCACAGTGTTTAACTGTAAAAGTACCAAAAATCAAAACCCATCTCTCTCGGAAGAAACCCCCAAATTTGAGGTTGTCATTGAACCTCATCATAAACAATGGCCCCGCCCCCAGTTTCAATTCCTTAATCCCCACATACACACACACACGCGCACACATTATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGGCGGGGCTGGTGCTGGACGGGGATGGATTCCGGGAAGCTGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGGAGATTCAATTATTAG ATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGGAGATTCAATTATTAG ATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGGAGATTCAATTATTAG MKKKPDLHQLHDDDRHLEILKAVAQAWHSHTGTSKPASEFDAHRRNSRPMPSRFKIEAIRSRTSTVSDRRWDFAQSLWDSYEIVTVSKKLESGGGRSQRKRRESCNSLRNLFNRASSRRFNY
BLAST of CsaV3_1G008840 vs. NCBI nr
Match: XP_011651756.1 (PREDICTED: uncharacterized protein LOC105434938 [Cucumis sativus] >KGN64344.1 hypothetical protein Csa_1G046880 [Cucumis sativus]) HSP 1 Score: 235.7 bits (600), Expect = 8.2e-59 Identity = 122/136 (89.71%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. NCBI nr
Match: XP_008438871.1 (PREDICTED: uncharacterized protein LOC103483829 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55 Identity = 115/136 (84.56%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. NCBI nr
Match: XP_022923731.1 (uncharacterized protein LOC111431350 [Cucurbita moschata]) HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39 Identity = 95/134 (70.90%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. NCBI nr
Match: XP_023519325.1 (uncharacterized protein LOC111782756 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 170.6 bits (431), Expect = 3.3e-39 Identity = 95/134 (70.90%), Postives = 103/134 (76.87%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. NCBI nr
Match: XP_023001654.1 (uncharacterized protein LOC111495727 [Cucurbita maxima]) HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39 Identity = 91/125 (72.80%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TAIR10
Match: AT4G24700.1 (unknown protein) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12 Identity = 52/119 (43.70%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TrEMBL
Match: tr|A0A0A0LTM3|A0A0A0LTM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046880 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 5.4e-59 Identity = 122/136 (89.71%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TrEMBL
Match: tr|A0A1S3AX17|A0A1S3AX17_CUCME (uncharacterized protein LOC103483829 OS=Cucumis melo OX=3656 GN=LOC103483829 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.6e-55 Identity = 115/136 (84.56%), Postives = 120/136 (88.24%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TrEMBL
Match: tr|V4TNE3|V4TNE3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022689mg PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27 Identity = 78/140 (55.71%), Postives = 94/140 (67.14%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TrEMBL
Match: tr|A0A151TT50|A0A151TT50_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_009428 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27 Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of CsaV3_1G008840 vs. TrEMBL
Match: tr|K4BK73|K4BK73_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 9.4e-27 Identity = 74/133 (55.64%), Postives = 90/133 (67.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |