CSPI01G08810 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAATTGGTGATCATAAACGAATGATCTAAATTTAGAGAGAAGAAGAAGAGTGAAGAAGAAGAAAGTAGAACAAAAATCCAAATGTAAGGTCCACAGTGTTTAACTGTAAAAGTACCAAAAATCAAAACCCATCTCTCTCGGAAGAAACCCCCAAATTTGAGGTTGTCATTGAACCTCATCATAAACAATGGCCCCGCCCCCAGTTTCAATTCCTTAATCCCCACATACACACACACACGCACACACATTATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGGCGGGGCTGGTGCTGGACGGGGATGGATTCCGGGAAGCTGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGAAGATTCAATTATTAGGGATTTCAAGTTCGAATTCGAACCGATGAATTGAATTTGAAACTTTGTTCATTATCAATTTTTGAAACCCAGAGGTCTTGTTTTTTTCTTTTTTCTTTTTCTTCTTTCTTAAG ATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGGCGGGGCTGGTGCTGGACGGGGATGGATTCCGGGAAGCTGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGAAGATTCAATTATTAG ATGAAGAAGAAACCAGACCTTCATCAGCTCCATGACGACGATCGTCATCTCGAAATCCTCAAGGCCGTCGCTCAGGCATGGCACAGCCACACCGGCACTTCAAAGCCTGCTAGTGAATTCGATGCCCATCGCCGGAACTCCAGACCCATGCCGTCTAGGTTCAAGATTGAGGCTATTCGGAGCCGGACTAGTACCGTCAGCGATCGGAGATGGGACTTCGCACAGTCGCTGTGGGATTCGTATGAGATCGTGACGGTTTCGAAGAAGCTAGAGGCGGGGCTGGTGCTGGACGGGGATGGATTCCGGGAAGCTGAGAGCGGCGGTGGGCGGAGTCAGCGGAAAAGGCGAGAGAGTTGTAATAGTTTGAGGAATTTGTTTAATAGGGCTTCTTCCAGAAGATTCAATTATTAG
BLAST of CSPI01G08810 vs. TrEMBL
Match: A0A0A0LTM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046880 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 3.2e-70 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of CSPI01G08810 vs. TrEMBL
Match: V4TNE3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022689mg PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-30 Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of CSPI01G08810 vs. TrEMBL
Match: A0A151TT50_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_009428 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.9e-30 Identity = 74/135 (54.81%), Postives = 97/135 (71.85%), Query Frame = 1
BLAST of CSPI01G08810 vs. TrEMBL
Match: K7KMT6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G041700 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.2e-30 Identity = 79/140 (56.43%), Postives = 97/140 (69.29%), Query Frame = 1
BLAST of CSPI01G08810 vs. TrEMBL
Match: A0A0B2RRC5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_016685 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.2e-30 Identity = 79/140 (56.43%), Postives = 97/140 (69.29%), Query Frame = 1
BLAST of CSPI01G08810 vs. TAIR10
Match: AT4G24700.1 (AT4G24700.1 unknown protein) HSP 1 Score: 95.5 bits (236), Expect = 2.7e-20 Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 1
BLAST of CSPI01G08810 vs. NCBI nr
Match: gi|778657893|ref|XP_011651756.1| (PREDICTED: uncharacterized protein LOC105434938 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 4.5e-70 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1
BLAST of CSPI01G08810 vs. NCBI nr
Match: gi|659067325|ref|XP_008438871.1| (PREDICTED: uncharacterized protein LOC103483829 [Cucumis melo]) HSP 1 Score: 260.8 bits (665), Expect = 1.4e-66 Identity = 129/136 (94.85%), Postives = 134/136 (98.53%), Query Frame = 1
BLAST of CSPI01G08810 vs. NCBI nr
Match: gi|1009175864|ref|XP_015869119.1| (PREDICTED: uncharacterized protein LOC107406504 [Ziziphus jujuba]) HSP 1 Score: 146.0 bits (367), Expect = 4.9e-32 Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of CSPI01G08810 vs. NCBI nr
Match: gi|764582686|ref|XP_011464159.1| (PREDICTED: uncharacterized protein LOC105351484 [Fragaria vesca subsp. vesca]) HSP 1 Score: 141.7 bits (356), Expect = 9.3e-31 Identity = 81/140 (57.86%), Postives = 105/140 (75.00%), Query Frame = 1
BLAST of CSPI01G08810 vs. NCBI nr
Match: gi|567894874|ref|XP_006439925.1| (hypothetical protein CICLE_v10022689mg [Citrus clementina]) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30 Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |