Csa7G368070 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa7G368070
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 12924086 .. 12925582 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCCGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTCAGAGGCTCAAGATCAAGTTTGTATTATTTTGTTTTTTTAGTCGCTTTCAAAAATTTTGGCTTATACATAGTTGAAAAGTTTAGAGGTCATAGAATAAATTGATTGAAAATGAACTTGTGATATTTTGAAAAACAAAGAGAAATTATAACCTAAATTAAGGATTAATTAAGGAATAAAAAGAGTTTGAGTTTAAACTAAAAATGTTCACGAATTCATTCTCAATTTCGAAATCATTAGATTGTTAAAGGGAATATTAACAAAATCATATCTTAGTAAAAATTTAATTAGATTTAAAGGTTGTTTTAGATATATATATATATATATAAAAATTTTAAACCAAGGTGGGGACATGGTCGAGTTGATCAAGTCAATGATTGGGATAGATAATGTATTGTTTATATCTTACCTCGTATTTAGTCTCTACAAGTAATTGTTTGATGAAAGTTAAATTCAATTTAGTTTTTTAAGTTTCAAAACACTTCACAACTTAGTTACACTTTGATTTTTACAAGTCGGAGAAGTTTTATGTTATACATCTAAAACAACCTTTAAATCTAATTAAACTGATCCAACCAAACATAAATAAATATGATTGAAAGTGTACCGTACAATTATTATATGCTTACGTTTTTTGATTTAGTGGTGATTTAACAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCAAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAAAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

mRNA sequence

ATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCCGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCAAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAAAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

Coding sequence (CDS)

ATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCCGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCAAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAAAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

Protein sequence

MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQSLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWEGFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETLKGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVGGLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG*

Homology

[Close]

BLAST of Csa7G368070 vs. TrEMBL
Match: A0A0A0K6V2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368070 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 3.1e-149
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


Query: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60
           MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ
Sbjct: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60

Query: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120
           SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE
Sbjct: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120

Query: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180
           GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL
Sbjct: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180

Query: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240
           KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG
Sbjct: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240

Query: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 280
           GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG
Sbjct: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 279

[Close]

BLAST of Csa7G368070 vs. TrEMBL
Match: A0A067LA07_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.6e-06
Identity = 36/141 (25.53%), Postives = 72/141 (51.06%), Query Frame = 1


Query: 10  LLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQSLGEALKSI 69
           +++  +++I    N++S +   L       L++  ++A+K+P EA   A Q + EA+K+ 
Sbjct: 1   MIVFLVRLIFFAINTISNVVSRLIFSVSAYLLVLIIQALKVPGEAAHGALQQIAEAIKAC 60

Query: 70  FVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWEGFNLFEQVR 129
           F   +E+    IS+ +    + ++  V GS    + SA GGL E T+ S +G  L + + 
Sbjct: 61  FEFLLELVMEAISALISSAFDLLIEAVTGS-AAVTGSAIGGLAEKTRTSLDG--LLKDLP 120

Query: 130 GIIESFCEFVLQQVWEIATSF 151
            + E F E +   V ++  ++
Sbjct: 121 ELAEGFSEMISTVVIDLWNNY 138

[Close]

BLAST of Csa7G368070 vs. TrEMBL
Match: A0A067LA07_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1)

HSP 1 Score: 32.7 bits (73), Expect = 8.6e+02
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 1


Query: 193 EGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVGGLVEKTRTGLE- 252
           E ++   E L+E ++   S +  SS + L  +++ V      +G ++GGL EKTRT L+ 
Sbjct: 55  EAIKACFEFLLELVMEAISALI-SSAFDL--LIEAVTGSAAVTGSAIGGLAEKTRTSLDG 114

Query: 253 ILK--MEKLRGIIVNIAKISVNMVINY 277
           +LK   E   G    I+ + +++  NY
Sbjct: 115 LLKDLPELAEGFSEMISTVVIDLWNNY 138

[Close]

BLAST of Csa7G368070 vs. NCBI nr
Match: gi|778730356|ref|XP_011659765.1| (PREDICTED: uncharacterized protein LOC105436268 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 4.5e-149
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1


Query: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60
           MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ
Sbjct: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60

Query: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120
           SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE
Sbjct: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120

Query: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180
           GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL
Sbjct: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180

Query: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240
           KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG
Sbjct: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240

Query: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 280
           GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG
Sbjct: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 279

The following BLAST results are available for this feature:

BLAST of Csa7G368070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6V2_CUCSA	3.1e-149	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368070 PE=4 SV=1	[more]
A0A067LA07_JATCU	8.6e-06	25.53	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1	[more]
A0A067LA07_JATCU	8.6e+02	29.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15146 PE=4 SV=1	[more]

BLAST of Csa7G368070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730356\|ref\|XP_011659765.1\|	4.5e-149	100.00	PREDICTED: uncharacterized protein LOC105436268 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU137788	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa7G368070.1	Csa7G368070.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU137788	CU137788	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa7G368070	Cla014902	Watermelon (97103) v1	cuwmB567
Csa7G368070	MELO3C021109	Melon (DHL92) v3.5.1	cumeB523
Csa7G368070	ClCG09G008470	Watermelon (Charleston Gray)	cuwcgB525
Csa7G368070	Cla97C09G171230	Watermelon (97103) v2	cuwmbB571
Csa7G368070	Bhi09G001056	Wax gourd	cuwgoB705
Csa7G368070	CSPI07G14810	Wild cucumber (PI 183967)	cpicuB354
Csa7G368070	Cucsa.387750	Cucumber (Gy14) v1	cgycuB545
Csa7G368070	CmoCh17G012650	Cucurbita moschata (Rifu)	cmocuB374
Csa7G368070	Cp4.1LG12g10700	Cucurbita pepo (Zucchini)	cpecuB157
Csa7G368070	Carg11474	Silver-seed gourd	carcuB0013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa7G368070	Cucurbita maxima (Rimu)	cmacuB384
Csa7G368070	Cucurbita maxima (Rimu)	cmacuB914
Csa7G368070	Cucurbita moschata (Rifu)	cmocuB900
Csa7G368070	Cucurbita pepo (Zucchini)	cpecuB337
Csa7G368070	Bottle gourd (USVL1VR-Ls)	culsiB503
Csa7G368070	Cucumber (Gy14) v2	cgybcuB323
Csa7G368070	Melon (DHL92) v3.6.1	cumedB502
Csa7G368070	Silver-seed gourd	carcuB0095