CSPI07G14810 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G14810
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Unknown protein
Location	Chr7 : 13429787 .. 13431323 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTGTTCTTCTTCTTCTTCCAATATTTCTCACATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCTGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTCAGAGGCTCAAGATCAAGTTTATATTATTTTGTTATTTTAGTCGCTTTCAAAAATTTTGGCTTATACATAGTTGAAAAGTTTAGAGTTCATAGAATAAATTGATTGAAAATCAACTTGTGATATTTTGAAAAACAAAGAGAAATTATAACCTAAATTAAGAATTAATTAAGGAATAAAAAGAGTTTGAGTTTAAACTAAAAATGTTCACGAATTCATTCTCAATTTCGAAATCATTAGATTGTTAAAGGGAATATTAACAAAATCATATCTTAGTAAAAATTTAATTAGATTTAAAGGTTGTTTTAGATGTATATATATATATATATATTAAAATTTTAAACCAAGGTGGGGACATGGTCGAGTTGATCAAGTCAATAATTGGGATAGATAATGTATTGCTTATATCTTACCTCGTATTTAGTCTCTACAAGTAATTGTTTGATGAAAGTTAAATTCAATTTAGTTTTTTAAGTTTCAAAACACTTCACAACTTAGTTACACTTTGATTTTTACAAGTTGGAGAAGTTTTATGTTATACATCTAAAACAACCTTTAAATCTAATTAAACTGATCCAACCAAACATAAATAAATATGATTGAAAGTGTACCGTACAATTATTATATGCTTACGTTTTTTGATTTAGTGGTGATTTAACAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCGAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAGAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

mRNA sequence

ATGCCTTGTTCTTCTTCTTCTTCCAATATTTCTCACATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCTGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCGAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAGAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

Coding sequence (CDS)

ATGCCTTGTTCTTCTTCTTCTTCCAATATTTCTCACATGGTTTCAACTTTTCTCCTTCTCCTCCTCTTAATCCCATCTCTAAAAATCATCATCAATGGCTTCAACTCCCTATCCACTTTAGCAATTTGCCTATTCTTAAAGGCCCCACCTTGTCTTATTCTTTCCTTTCTAAAGGCCATTAAACTCCCTGCTGAGGCCTTTTTGAGTGCATTTCAAAGCCTTGGTGAAGCTTTGAAGTCTATTTTTGTTAGCACAATTGAGATGGGGTTTGGAATTATAAGCTCTTTTGTAATGGGTGTGTTGGAGGCTGTGATGAATGTGGTTTTTGGGTCTTTTGTTGAGTCAAGTGCTTCTGCCTTTGGAGGGCTTTTGGAGAATACTAAAGGTTCTTGGGAAGGGTTTAATTTGTTTGAACAAGTGAGGGGGATTATTGAAAGCTTTTGTGAGTTTGTTCTTCAACAAGTTTGGGAAATTGCAACTTCTTTTGCAGGTGGGATGTTCGAGTTCACGATGACGAATATGTCTACGATGTTTAACGAACCTGGTTCAGTCATAGGAGGACTAGTGGAGACGTTGAAGGGATCATTAATGGATGGGGTTGGTTCATGGATGGAAGGAGTTCGAGGTATTGTTGAGAGGTTAATAGAGAAGATGGTGAATACGAGTTCTGAAGTGGCGAACTCTTCAACATATGGTTTGTTTGAGATTGTGAAAACAGTGTTTAATTTGGTGGTTGATTCGGGTTATAGTGTTGGAGGGTTAGTAGAGAAGACACGAACTGGATTGGAGATTCTAAAAATGGAAGAGCTTCGAGGGATTATTGTGAACATTGCTAAGATAAGTGTGAATATGGTTATTAATTATTTATTTGGTTAA

Homology

[Close]

BLAST of CSPI07G14810 vs. TrEMBL
Match: A0A0A0K6V2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368070 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 7.1e-144
Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 1


Query: 13  MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 72
           MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ
Sbjct: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60

Query: 73  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 132
           SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE
Sbjct: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120

Query: 133 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 192
           GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL
Sbjct: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180

Query: 193 KGSLMDGVGSWMEGVRGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 252
           KGSLMDGVGSWMEGV+GIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG
Sbjct: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240

Query: 253 GLVEKTRTGLEILKMEELRGIIVNIAKISVNMVINYLFG 292
           GLVEKTRTGLEILKME+LRGIIVNIAKISVNMVINYLFG
Sbjct: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 279

[Close]

BLAST of CSPI07G14810 vs. NCBI nr
Match: gi|778730356|ref|XP_011659765.1| (PREDICTED: uncharacterized protein LOC105436268 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 1.0e-143
Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 1


Query: 13  MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 72
           MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ
Sbjct: 1   MVSTFLLLLLLIPSLKIIINGFNSLSTLAICLFLKAPPCLILSFLKAIKLPAEAFLSAFQ 60

Query: 73  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 132
           SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE
Sbjct: 61  SLGEALKSIFVSTIEMGFGIISSFVMGVLEAVMNVVFGSFVESSASAFGGLLENTKGSWE 120

Query: 133 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 192
           GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL
Sbjct: 121 GFNLFEQVRGIIESFCEFVLQQVWEIATSFAGGMFEFTMTNMSTMFNEPGSVIGGLVETL 180

Query: 193 KGSLMDGVGSWMEGVRGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 252
           KGSLMDGVGSWMEGV+GIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG
Sbjct: 181 KGSLMDGVGSWMEGVQGIVERLIEKMVNTSSEVANSSTYGLFEIVKTVFNLVVDSGYSVG 240

Query: 253 GLVEKTRTGLEILKMEELRGIIVNIAKISVNMVINYLFG 292
           GLVEKTRTGLEILKME+LRGIIVNIAKISVNMVINYLFG
Sbjct: 241 GLVEKTRTGLEILKMEKLRGIIVNIAKISVNMVINYLFG 279

The following BLAST results are available for this feature:

BLAST of CSPI07G14810 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G14810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6V2_CUCSA	7.1e-144	99.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368070 PE=4 SV=1	[more]

BLAST of CSPI07G14810 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CSPI07G14810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730356\|ref\|XP_011659765.1\|	1.0e-143	99.28	PREDICTED: uncharacterized protein LOC105436268 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G14810.1	CSPI07G14810.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G14810	Cla014902	Watermelon (97103) v1	cpiwmB586
CSPI07G14810	Csa7G368070	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G14810	MELO3C021109	Melon (DHL92) v3.5.1	cpimeB527
CSPI07G14810	ClCG09G008470	Watermelon (Charleston Gray)	cpiwcgB554
CSPI07G14810	CsaV3_7G026590	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G14810	Cla97C09G171230	Watermelon (97103) v2	cpiwmbB597
CSPI07G14810	Bhi09G001056	Wax gourd	cpiwgoB717
CSPI07G14810	Cucsa.387750	Cucumber (Gy14) v1	cgycpiB574
CSPI07G14810	CmoCh17G012650	Cucurbita moschata (Rifu)	cmocpiB377
CSPI07G14810	Cp4.1LG12g10700	Cucurbita pepo (Zucchini)	cpecpiB159
CSPI07G14810	Carg11474	Silver-seed gourd	carcpiB0013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G14810	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G14810	Cucurbita maxima (Rimu)	cmacpiB388
CSPI07G14810	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G14810	Cucurbita pepo (Zucchini)	cpecpiB338
CSPI07G14810	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G14810	Melon (DHL92) v3.6.1	cpimedB513
CSPI07G14810	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G14810	Silver-seed gourd	carcpiB0099