Csa6G134380 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G134380
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	UPF0678 fatty acid-binding protein-like protein; contains IPR011038 (Calycin-like), IPR014878 (Domain of unknown function DUF1794), IPR022939 (Uncharacterised protein family UPF0678)
Location	Chr6 : 9348953 .. 9353305 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTCGTTTACGAGGGAAGGACAAGGTGTATTTGTTGTGTACTCCGCCGGTAAGAAACTAAAAACACTAACACAAACGCGAACGAGTGAAAACAGCCATAGAAATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGGTAACCGTCAACTCCCTGTTCTTCGTCTCTATTCATTATCGTCGTTGATATCATCTTAATATAATTAAAATCGTCCCACTTCACTCGATTGGATTTTGCTTATTTAGTCTAATCGGTTATCTTCCTTGTTTGGGGATTTTTTAATACGATGATGATGGGAGAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGGTCAACCATCTCTATCTCTCCTTCTTGTGTGGTTTACTGTTACATTCAAATTCATCGGCCGGAAGAGATTTTTTGTTGAATATAGACGTGCTTGTGCTTTTCGATTTTGATTTAGAGAAGTAATGATCGAAACAAACGGGTTCTTTGAGATGATATAAAAAGGCTTTATACTCTGTGAGCTCTAACAATATAATCAATCAGGTCCTGTCTGCTGAAACAAAACCTCCCTTTTGCCCTCACTTGGCCCTGTCTTTCCCGCCAAAACGAACGGCCATCTTTTCTAACCGTTGAAATCTCAGTCGCCATCTTTGAAATTGCAACGATTTGATTTCTTCAATCTCGACTTACTCCATGGCCCTAAAGCTCAGATTCTGAAACTACACTGCCACTATCAACTGTATCGTCAATTGCTATGTCAGATTCAGCAAGAGTTGTAGCCGCACATCAACTGTTCGATGAAATGCCCAACATAAATGTTGTGTCACGGATCTCACTCATGGCAGGTTATGTTGAGATTGTGGCTGGTATTGTTCATTCACAGTTCAGGCGGTGTCGAGAAGTTCAATTGTTTTCGAAGACTCCACTTTTGCAGCTGCAACCGAGGCCTGTTTGAAAAGTTCCGTGCCTATGTTAAGATTTTTGGCTATGGAGCTAATGTTATGGTCTGTTCCTCTCGCTTCTTGATACGTATGGGAAGTGTGTAACGATGTTGAAGCTAGGAGAGTCTTCGATTCCATGTTGTGTAAGATTATTGTTTTGATTCCATGTCGTGTTCCAGTTGCAATCAACACAAGCTTCTTCTCGCATCGCCAGGCTTCAGCGCGATCTAGCCTCAAACGCAACCTTTTTCGCGTAACGTCTCTTCTACATAGCTAAAATAAACCTTTCAACAAAGCTTCTTCCTTTTCTGGATCTGGGTCCTACAAATCATGTACTAAAAACGTTGGTATTTCATTTGAAAGTGAGCTTTATGGATAGATTATATGGTTGAAGTGGATAGGTGTGAAATGAAATTAATCATCGTGAGTTGACCTAGTTTAGTTGCTCATTAAGGGACATGGGTGTGACATGGCTAGAGCTTTAGCGGGAATGAATTCAAATGTATGGCGGTCAACTATTTAGGATTTAATATTCTACGAGCTTCCCTGACACCTAAATTTTATAAGATTAGACTGGTTTTCACATAAGAGTAGTCGAGATATAGCCAAGGTACCTCAATCACTCATGGAGATGGAAAAAAAAGTGAAATGAAACAAAGCTCCTCAAATCCCTCCTCCATATGAATGTGTGAAACTTGATCAAACTACAAGTGCTATTTTGTCCGCCTTTTATCTGCGATCTTCTTGAGTTGATATTTTTAATTGTGGTATGGATCTAATAGCTTGTGATGTAGGTGCAGATTGCCTTTCTTTGCTGCATGCATACTCTTCACACAACCAGAATGGTGAAACTGATAAGAAGCGAAATAAGACGCATCATTACAAAATTATATGGAGGTTTTCTAAGTGGGGTTGAACTTAAAATAAATCAGCAGCAAGTTGGATGGTTAGATATGACTTTCAGATTAGGAAAGAAGAAAAATAGATTCATATTGCTGCTCACGTGAACTTTCACATTGCCATAAAAACTCTGGTTTCTATAGCCAATTTTTATTTGCTTGACATCGAAATTTTATAACCAGTACTATATTTGCATCATTATCATCAACTCCTGAATATTATTTTCAGTTTTCTACAACTTGCAACTAATGGAGACCTCTGTTTTACTTTTCATTTAATTTGATCCGATTTGTCTCTGTTCCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTAACGATCACTATATCCGTCATTATTTCAAATACAGATATATCTTTTGTTCTGTACCTATTTCATTATTTATTTTTGGTTTTGAAAAATTAAGCCTATTTCCTCTCAATTTTTTACCAAGATTTTTATGTTTCTGGTATAAGAGTTGAATTTTCAAATTTTCCAGTTAAATTCAAAAAATAAAATCATGATTTTAAAAACTATTTTTTTTTCAGTTTTCCAAATTTGGAAGGTGGAAGGAGTGTTTACGGGCTTAATGATCAAAAACAAAAGATCAAATTGTTTATGAATGTGCGTGTTAAACCTGTGTAACCTAGGGTCAAGAAGTTAAAGCCTCTCTTTGGTAATATGAATTTACCCAAGCTTATGAGATCTTCACTTTATACTGTATTCTAATTCTTTTAAATCATAAACCCATGAACTAAATATCGCAATGGGAACTAAGTTTCTATATGTATTTGTTTATATTATACAATTCGAACCGACGTTCACACAAACCTAAATGTCCATCTTCTAGGCTTACTAAAATCACAAGCCAAGCGCCCCTGACTCCCTTGACGGATTTATGTGTTAGTTTTTATGACAAAAGATGCCTGAGAATAATGTGTCCGAGAATGAGATGTCTAAGAATCAAAGATAATTGAGTTTGATCGTACATGGCCACAAATTGTGTTTTTATTTAATTTATAGAATTACACATGAAAATCTTACATAGATGGATGCGAAGTGTATGCCAAAGTGTACAAATGAATTGGTTCTGTTAGAGGCGATAAATTAACCACAGAACATCTTATAAACGAGATAGATTATCATTGTCTGATGGAAAATACTGCTCGTCCCCCATTGTATGAGATCAATACAACAGGTGGGTAAGCTTTTCTTCTTTTATTTTCCTCGAAAGCTTGTTAATCAATAATTAGTTACACTCAGATCAACATACTAGATGTAAGGAACGACACTTAAGTTTAGCGAGCAGATTTATGTCAGACATTTAAACATTTGACACTTGTTAAACACATTTTGAACACATGTTAGTATAATGCATGTGTTAGATACTAGTCATACAAAGCCAATAATCGGTCTAACAATTAGATAAATCAAGTGTGACATGCATCAAACGATATTGCATAAAACTATTGACTTTAGTCAATATATGTTCTCTTGCTAAGTATATTCTTGATTTTTTAAAAATGACTTGTCACGTGAACTTAGCTCAAAAGTAATTGACGGAAGGTAGGTAATTGACGTAACCTTCCATCCTATAGTGGGAGGTTTAGTTTCTTATAATTGTTGTACTAAATAAAAAAACTTATCCTGTATTTGTATCTTGCATCTTGCATTGGTGTACTATTTACTGGCCTCTATTATTGGGACAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGACGCAATAAAATAAGGTTAAGTCATAAAAAAATTCCTTCCAACTCTTTTATTTATTTTAAAATTACCCTTAATACTTTCAAAAGTTTGCAACAGTATCCTTGGATTTTCATGAAGGTTTCAAAAATACTGTTGGAGCAGAAATTCTTTACCATTCTGAGATATGAAATAATGTAGGGTGGGTAGGTGACATGGAGCGAAAATTTGAAGCACTGCATTGTTAGGTCATAATCATGCAATTCTAAATCCTGATTTTCTGTTTGAAACATTTATGAGATTTTAGGGAAATATTGTAACTTTTTTGAAAGTATTATGTAGTTTTGAAACAAATAGAAAAGTTTAAGAGATTTATAATAATTTGTCAAAAAAGAGAACAATGATAAATCCTTTAATT

mRNA sequence

ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGA

Coding sequence (CDS)

ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGA

Protein sequence

MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV*

Homology

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BLAST of Csa6G134380 vs. Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.9e-63
Identity = 117/158 (74.05%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

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BLAST of Csa6G134380 vs. Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  APLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Csa6G134380 vs. Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  TPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Csa6G134380 vs. Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-27
Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L  +A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  ++R F++   ELSY VQM      LQ HL A+L
Sbjct: 122 VTALARWFRIDGDELSYSVQMGAVGQPLQDHLAAVL 157

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BLAST of Csa6G134380 vs. Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26
Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L   A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  + R F++   +LSY VQM      LQ HL A+L
Sbjct: 122 VTALGRWFRIDGDKLSYSVQMGAVGQPLQDHLAAVL 157

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BLAST of Csa6G134380 vs. TrEMBL
Match: A0A0A0KAL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

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BLAST of Csa6G134380 vs. TrEMBL
Match: A5BBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-71
Identity = 134/156 (85.90%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 15  PAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLD 74
           P P  +HPA+ PLS+LLGTWRG+GEGGFPTINSFSYGEEL FSHSGKPVI+YSQ+TWKL 
Sbjct: 9   PPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAYSQRTWKLS 68

Query: 75  SKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKE 134
           S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++KLQSELVGNASKV E
Sbjct: 69  SGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELVGNASKVTE 128

Query: 135 ISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           ISRVF+LV+GELSYVVQMAT L SLQPHLKALL K+
Sbjct: 129 ISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

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BLAST of Csa6G134380 vs. TrEMBL
Match: M0S6G6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.8e-70
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 14  APAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKL 73
           APAP  +HPA+ PLS+LLG WRG+GEGGFPTINSF+YGEEL FSHSGKPVI+YSQKTWKL
Sbjct: 9   APAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGKPVIAYSQKTWKL 68

Query: 74  DSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVK 133
            S EPMHAESGYWRPKPDG+IEVVIAQSTGL EVQKGTY+AE +++ LQSELVGNASKVK
Sbjct: 69  ASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVGNASKVK 128

Query: 134 EISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           EI+RVFK+V+GELSYVVQMAT +TSLQPHLKALL KV
Sbjct: 129 EITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

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BLAST of Csa6G134380 vs. TrEMBL
Match: C6SZP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHS- 60
           MD E     +PAP  +P  IHPAV P+S+LLGTWRG+GEGGFPTINSFSYGEELHFSHS 
Sbjct: 1   MDAE---TESPAPETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSP 60

Query: 61  GKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120
            KPVI Y+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQS GLVEVQKGTY+AEEKVI
Sbjct: 61  NKPVIGYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           +LQSE+VGNASKVKEI R F+LVDG L Y VQMAT   +LQPHLKA L K+
Sbjct: 121 QLQSEIVGNASKVKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

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BLAST of Csa6G134380 vs. TrEMBL
Match: A0A0B2QJ30_GLYSO (UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_026546 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHS- 60
           MD E     +PAP  +P  IHPAV P+S+LLGTWRG+GEGGFPTINSFSYGEELHFSHS 
Sbjct: 1   MDAE---TESPAPETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSP 60

Query: 61  GKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120
            KPVI Y+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQS GLVEVQKGTY+AEEKVI
Sbjct: 61  NKPVIGYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           +LQSE+VGNASKVKEI R F+LVDG L Y VQMAT   +LQPHLKA L K+
Sbjct: 121 QLQSEIVGNASKVKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

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BLAST of Csa6G134380 vs. TAIR10
Match: AT1G79260.1 (AT1G79260.1 Domain of unknown function DUF1794 (InterPro:IPR014878))

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-64
Identity = 117/158 (74.05%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

[Close]

BLAST of Csa6G134380 vs. NCBI nr
Match: gi|449444310|ref|XP_004139918.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of Csa6G134380 vs. NCBI nr
Match: gi|659112544|ref|XP_008456272.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAP     SIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPP----SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGT+NAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of Csa6G134380 vs. NCBI nr
Match: gi|731434477|ref|XP_010645079.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vinifera])

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 134/156 (85.90%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 15  PAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLD 74
           P P  +HPA+ PLS+LLGTWRG+GEGGFPTINSFSYGEEL FSHSGKPVI+YSQ+TWKL 
Sbjct: 9   PPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAYSQRTWKLS 68

Query: 75  SKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKE 134
           S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++KLQSELVGNASKV E
Sbjct: 69  SGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELVGNASKVTE 128

Query: 135 ISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           ISRVF+LV+GELSYVVQMAT L SLQPHLKALL K+
Sbjct: 129 ISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

[Close]

BLAST of Csa6G134380 vs. NCBI nr
Match: gi|672163311|ref|XP_008801499.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix dactylifera])

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70
Identity = 133/170 (78.24%), Postives = 148/170 (87.06%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDG    +S P P P PL  HPA+ PLSFLLG WRG+GEGGFPTINSF YGEEL FSHSG
Sbjct: 1   MDGGAAGSSPPPPEPPPL--HPAIAPLSFLLGRWRGEGEGGFPTINSFRYGEELQFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KP I+YSQKTWKL S EPMHAESGYWRPKPDG+IEVVI+QSTGLVEVQKG+Y+AE+K++ 
Sbjct: 61  KPAIAYSQKTWKLTSGEPMHAESGYWRPKPDGSIEVVISQSTGLVEVQKGSYDAEQKIVT 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNA+KVKEI+RVFK+ DG LSYVVQMAT LTSLQPHLKALL K+
Sbjct: 121 LQSELVGNAAKVKEITRVFKVADGNLSYVVQMATHLTSLQPHLKALLKKI 168

[Close]

BLAST of Csa6G134380 vs. NCBI nr
Match: gi|695005842|ref|XP_009389385.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 14  APAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKL 73
           APAP  +HPA+ PLS+LLG WRG+GEGGFPTINSF+YGEEL FSHSGKPVI+YSQKTWKL
Sbjct: 9   APAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGKPVIAYSQKTWKL 68

Query: 74  DSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVK 133
            S EPMHAESGYWRPKPDG+IEVVIAQSTGL EVQKGTY+AE +++ LQSELVGNASKVK
Sbjct: 69  ASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVGNASKVK 128

Query: 134 EISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           EI+RVFK+V+GELSYVVQMAT +TSLQPHLKALL KV
Sbjct: 129 EITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

The following BLAST results are available for this feature:

BLAST of Csa6G134380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1926_ARATH	3.9e-63	74.05	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian...	[more]
Y1995_MYCMM	1.2e-27	41.14	UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marin...	[more]
Y3360_MYCUA	1.6e-27	41.14	UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcera...	[more]
Y2833_MYCPA	4.5e-27	40.38	UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium parat...	[more]
Y3611_MYCA1	2.3e-26	39.74	UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium ...	[more]

BLAST of Csa6G134380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL2_CUCSA	1.4e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1	[more]
A5BBZ0_VITVI	1.2e-71	85.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=...	[more]
M0S6G6_MUSAM	8.8e-70	82.80	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
C6SZP1_SOYBN	3.1e-67	77.19	Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1	[more]
A0A0B2QJ30_GLYSO	3.1e-67	77.19	UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_02654...	[more]

BLAST of Csa6G134380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79260.1	2.2e-64	74.05	Domain of unknown function DUF1794 (InterPro:IPR014878)	[more]

BLAST of Csa6G134380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444310\|ref\|XP_004139918.1\|	2.0e-91	100.00	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sa...	[more]
gi\|659112544\|ref\|XP_008456272.1\|	3.7e-85	95.29	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis me...	[more]
gi\|731434477\|ref\|XP_010645079.1\|	1.8e-71	85.90	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vini...	[more]
gi\|672163311\|ref\|XP_008801499.1\|	2.5e-70	78.24	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix da...	[more]
gi\|695005842\|ref\|XP_009389385.1\|	1.3e-69	82.80	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acumi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011038	Calycin-like
IPR014878	DUF1794
IPR022939	UPF0678
IPR011038	Calycin-like
IPR014878	DUF1794
IPR022939	UPF0678

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU085860	cucumber EST collection version 3.0	transcribed_cluster
CU093179	cucumber EST collection version 3.0	transcribed_cluster
CU137064	cucumber EST collection version 3.0	transcribed_cluster
CU142491	cucumber EST collection version 3.0	transcribed_cluster
CU172546	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G134380.1	Csa6G134380.1	mRNA
Csa6G134380.2	Csa6G134380.2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU085860	CU085860	transcribed_cluster
CU137064	CU137064	transcribed_cluster
CU142491	CU142491	transcribed_cluster
CU172546	CU172546	transcribed_cluster
CU093179	CU093179	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011038	Calycin-like	unknown	SSF50814	Lipocalins	coord: 19..170 score: 3.75
IPR014878	Domain of unknown function DUF1794	PFAM	PF08768	DUF1794	coord: 24..169 score: 1.4
IPR022939	Uncharacterised protein family UPF0678	HAMAP	MF_01297	UPF0678	coord: 16..170 score: 23
None	No IPR available	PANTHER	PTHR15854	THAP4 PROTEIN	coord: 11..170 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G134380	Cla013436	Watermelon (97103) v1	cuwmB526
Csa6G134380	MELO3C019608	Melon (DHL92) v3.5.1	cumeB443
Csa6G134380	ClCG02G018850	Watermelon (Charleston Gray)	cuwcgB452
Csa6G134380	Lsi10G015000	Bottle gourd (USVL1VR-Ls)	culsiB407
Csa6G134380	MELO3C019608.2	Melon (DHL92) v3.6.1	cumedB424
Csa6G134380	Cla97C02G044780	Watermelon (97103) v2	cuwmbB442
Csa6G134380	Bhi10G000716	Wax gourd	cuwgoB597
Csa6G134380	CSPI06G10880	Wild cucumber (PI 183967)	cpicuB314
Csa6G134380	Cucsa.118730	Cucumber (Gy14) v1	cgycuB155
Csa6G134380	CmoCh20G003190	Cucurbita moschata (Rifu)	cmocuB553
Csa6G134380	Cp4.1LG16g06880	Cucurbita pepo (Zucchini)	cpecuB282
Csa6G134380	CsGy6G011000	Cucumber (Gy14) v2	cgybcuB282
Csa6G134380	Carg03410	Silver-seed gourd	carcuB0367

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G134380	Silver-seed gourd	carcuB1076
Csa6G134380	Cucumber (Chinese Long) v2	cucuB172
Csa6G134380	Cucurbita maxima (Rimu)	cmacuB563
Csa6G134380	Cucurbita maxima (Rimu)	cmacuB622
Csa6G134380	Cucurbita maxima (Rimu)	cmacuB634
Csa6G134380	Cucurbita moschata (Rifu)	cmocuB622
Csa6G134380	Cucurbita pepo (Zucchini)	cpecuB743