Csa6G134380.2 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G134380.2
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	UPF0678 fatty acid-binding protein-like protein; contains IPR011038 (Calycin-like), IPR014878 (Domain of unknown function DUF1794), IPR022939 (Uncharacterised protein family UPF0678)
Location	Chr6 : 9348953 .. 9353305 (+)
Sequence length	513

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTTCGTTTACGAGGGAAGGACAAGGTGTATTTGTTGTGTACTCCGCCGGTAAGAAACTAAAAACACTAACACAAACGCGAACGAGTGAAAACAGCCATAGAAATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGGTAACCGTCAACTCCCTGTTCTTCGTCTCTATTCATTATCGTCGTTGATATCATCTTAATATAATTAAAATCGTCCCACTTCACTCGATTGGATTTTGCTTATTTAGTCTAATCGGTTATCTTCCTTGTTTGGGGATTTTTTAATACGATGATGATGGGAGAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGGTCAACCATCTCTATCTCTCCTTCTTGTGTGGTTTACTGTTACATTCAAATTCATCGGCCGGAAGAGATTTTTTGTTGAATATAGACGTGCTTGTGCTTTTCGATTTTGATTTAGAGAAGTAATGATCGAAACAAACGGGTTCTTTGAGATGATATAAAAAGGCTTTATACTCTGTGAGCTCTAACAATATAATCAATCAGGTCCTGTCTGCTGAAACAAAACCTCCCTTTTGCCCTCACTTGGCCCTGTCTTTCCCGCCAAAACGAACGGCCATCTTTTCTAACCGTTGAAATCTCAGTCGCCATCTTTGAAATTGCAACGATTTGATTTCTTCAATCTCGACTTACTCCATGGCCCTAAAGCTCAGATTCTGAAACTACACTGCCACTATCAACTGTATCGTCAATTGCTATGTCAGATTCAGCAAGAGTTGTAGCCGCACATCAACTGTTCGATGAAATGCCCAACATAAATGTTGTGTCACGGATCTCACTCATGGCAGGTTATGTTGAGATTGTGGCTGGTATTGTTCATTCACAGTTCAGGCGGTGTCGAGAAGTTCAATTGTTTTCGAAGACTCCACTTTTGCAGCTGCAACCGAGGCCTGTTTGAAAAGTTCCGTGCCTATGTTAAGATTTTTGGCTATGGAGCTAATGTTATGGTCTGTTCCTCTCGCTTCTTGATACGTATGGGAAGTGTGTAACGATGTTGAAGCTAGGAGAGTCTTCGATTCCATGTTGTGTAAGATTATTGTTTTGATTCCATGTCGTGTTCCAGTTGCAATCAACACAAGCTTCTTCTCGCATCGCCAGGCTTCAGCGCGATCTAGCCTCAAACGCAACCTTTTTCGCGTAACGTCTCTTCTACATAGCTAAAATAAACCTTTCAACAAAGCTTCTTCCTTTTCTGGATCTGGGTCCTACAAATCATGTACTAAAAACGTTGGTATTTCATTTGAAAGTGAGCTTTATGGATAGATTATATGGTTGAAGTGGATAGGTGTGAAATGAAATTAATCATCGTGAGTTGACCTAGTTTAGTTGCTCATTAAGGGACATGGGTGTGACATGGCTAGAGCTTTAGCGGGAATGAATTCAAATGTATGGCGGTCAACTATTTAGGATTTAATATTCTACGAGCTTCCCTGACACCTAAATTTTATAAGATTAGACTGGTTTTCACATAAGAGTAGTCGAGATATAGCCAAGGTACCTCAATCACTCATGGAGATGGAAAAAAAAGTGAAATGAAACAAAGCTCCTCAAATCCCTCCTCCATATGAATGTGTGAAACTTGATCAAACTACAAGTGCTATTTTGTCCGCCTTTTATCTGCGATCTTCTTGAGTTGATATTTTTAATTGTGGTATGGATCTAATAGCTTGTGATGTAGGTGCAGATTGCCTTTCTTTGCTGCATGCATACTCTTCACACAACCAGAATGGTGAAACTGATAAGAAGCGAAATAAGACGCATCATTACAAAATTATATGGAGGTTTTCTAAGTGGGGTTGAACTTAAAATAAATCAGCAGCAAGTTGGATGGTTAGATATGACTTTCAGATTAGGAAAGAAGAAAAATAGATTCATATTGCTGCTCACGTGAACTTTCACATTGCCATAAAAACTCTGGTTTCTATAGCCAATTTTTATTTGCTTGACATCGAAATTTTATAACCAGTACTATATTTGCATCATTATCATCAACTCCTGAATATTATTTTCAGTTTTCTACAACTTGCAACTAATGGAGACCTCTGTTTTACTTTTCATTTAATTTGATCCGATTTGTCTCTGTTCCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTAACGATCACTATATCCGTCATTATTTCAAATACAGATATATCTTTTGTTCTGTACCTATTTCATTATTTATTTTTGGTTTTGAAAAATTAAGCCTATTTCCTCTCAATTTTTTACCAAGATTTTTATGTTTCTGGTATAAGAGTTGAATTTTCAAATTTTCCAGTTAAATTCAAAAAATAAAATCATGATTTTAAAAACTATTTTTTTTTCAGTTTTCCAAATTTGGAAGGTGGAAGGAGTGTTTACGGGCTTAATGATCAAAAACAAAAGATCAAATTGTTTATGAATGTGCGTGTTAAACCTGTGTAACCTAGGGTCAAGAAGTTAAAGCCTCTCTTTGGTAATATGAATTTACCCAAGCTTATGAGATCTTCACTTTATACTGTATTCTAATTCTTTTAAATCATAAACCCATGAACTAAATATCGCAATGGGAACTAAGTTTCTATATGTATTTGTTTATATTATACAATTCGAACCGACGTTCACACAAACCTAAATGTCCATCTTCTAGGCTTACTAAAATCACAAGCCAAGCGCCCCTGACTCCCTTGACGGATTTATGTGTTAGTTTTTATGACAAAAGATGCCTGAGAATAATGTGTCCGAGAATGAGATGTCTAAGAATCAAAGATAATTGAGTTTGATCGTACATGGCCACAAATTGTGTTTTTATTTAATTTATAGAATTACACATGAAAATCTTACATAGATGGATGCGAAGTGTATGCCAAAGTGTACAAATGAATTGGTTCTGTTAGAGGCGATAAATTAACCACAGAACATCTTATAAACGAGATAGATTATCATTGTCTGATGGAAAATACTGCTCGTCCCCCATTGTATGAGATCAATACAACAGGTGGGTAAGCTTTTCTTCTTTTATTTTCCTCGAAAGCTTGTTAATCAATAATTAGTTACACTCAGATCAACATACTAGATGTAAGGAACGACACTTAAGTTTAGCGAGCAGATTTATGTCAGACATTTAAACATTTGACACTTGTTAAACACATTTTGAACACATGTTAGTATAATGCATGTGTTAGATACTAGTCATACAAAGCCAATAATCGGTCTAACAATTAGATAAATCAAGTGTGACATGCATCAAACGATATTGCATAAAACTATTGACTTTAGTCAATATATGTTCTCTTGCTAAGTATATTCTTGATTTTTTAAAAATGACTTGTCACGTGAACTTAGCTCAAAAGTAATTGACGGAAGGTAGGTAATTGACGTAACCTTCCATCCTATAGTGGGAGGTTTAGTTTCTTATAATTGTTGTACTAAATAAAAAAACTTATCCTGTATTTGTATCTTGCATCTTGCATTGGTGTACTATTTACTGGCCTCTATTATTGGGACAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGACGCAATAAAATAAGGTTAAGTCATAAAAAAATTCCTTCCAACTCTTTTATTTATTTTAAAATTACCCTTAATACTTTCAAAAGTTTGCAACAGTATCCTTGGATTTTCATGAAGGTTTCAAAAATACTGTTGGAGCAGAAATTCTTTACCATTCTGAGATATGAAATAATGTAGGGTGGGTAGGTGACATGGAGCGAAAATTTGAAGCACTGCATTGTTAGGTCATAATCATGCAATTCTAAATCCTGATTTTCTGTTTGAAACATTTATGAGATTTTAGGGAAATATTGTAACTTTTTTGAAAGTATTATGTAGTTTTGAAACAAATAGAAAAGTTTAAGAGATTTATAATAATTTGTCAAAAAAGAGAACAATGATAAATCCTTTAATT

mRNA sequence

ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGA

Coding sequence (CDS)

ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTATCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCACTTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTGAAAGAAATAAGCAGAGTGTTTAAATTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTACCTTAACCAGTCTTCAACCACACTTAAAAGCCTTGCTCACTAAAGTTTGA

Protein sequence

MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV*

Homology

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BLAST of Csa6G134380.2 vs. Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.9e-63
Identity = 117/158 (74.05%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

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BLAST of Csa6G134380.2 vs. Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-27
Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  APLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Csa6G134380.2 vs. Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-27
Identity = 65/158 (41.14%), Postives = 93/158 (58.86%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  TPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Csa6G134380.2 vs. Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-27
Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L  +A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  ++R F++   ELSY VQM      LQ HL A+L
Sbjct: 122 VTALARWFRIDGDELSYSVQMGAVGQPLQDHLAAVL 157

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BLAST of Csa6G134380.2 vs. Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26
Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 1


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L   A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  + R F++   +LSY VQM      LQ HL A+L
Sbjct: 122 VTALGRWFRIDGDKLSYSVQMGAVGQPLQDHLAAVL 157

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BLAST of Csa6G134380.2 vs. TrEMBL
Match: A0A0A0KAL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

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BLAST of Csa6G134380.2 vs. TrEMBL
Match: A5BBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.2e-71
Identity = 134/156 (85.90%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 15  PAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLD 74
           P P  +HPA+ PLS+LLGTWRG+GEGGFPTINSFSYGEEL FSHSGKPVI+YSQ+TWKL 
Sbjct: 9   PPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAYSQRTWKLS 68

Query: 75  SKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKE 134
           S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++KLQSELVGNASKV E
Sbjct: 69  SGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELVGNASKVTE 128

Query: 135 ISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           ISRVF+LV+GELSYVVQMAT L SLQPHLKALL K+
Sbjct: 129 ISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

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BLAST of Csa6G134380.2 vs. TrEMBL
Match: M0S6G6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.8e-70
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 14  APAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKL 73
           APAP  +HPA+ PLS+LLG WRG+GEGGFPTINSF+YGEEL FSHSGKPVI+YSQKTWKL
Sbjct: 9   APAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGKPVIAYSQKTWKL 68

Query: 74  DSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVK 133
            S EPMHAESGYWRPKPDG+IEVVIAQSTGL EVQKGTY+AE +++ LQSELVGNASKVK
Sbjct: 69  ASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVGNASKVK 128

Query: 134 EISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           EI+RVFK+V+GELSYVVQMAT +TSLQPHLKALL KV
Sbjct: 129 EITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

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BLAST of Csa6G134380.2 vs. TrEMBL
Match: C6SZP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHS- 60
           MD E     +PAP  +P  IHPAV P+S+LLGTWRG+GEGGFPTINSFSYGEELHFSHS 
Sbjct: 1   MDAE---TESPAPETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSP 60

Query: 61  GKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120
            KPVI Y+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQS GLVEVQKGTY+AEEKVI
Sbjct: 61  NKPVIGYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           +LQSE+VGNASKVKEI R F+LVDG L Y VQMAT   +LQPHLKA L K+
Sbjct: 121 QLQSEIVGNASKVKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

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BLAST of Csa6G134380.2 vs. TrEMBL
Match: A0A0B2QJ30_GLYSO (UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_026546 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHS- 60
           MD E     +PAP  +P  IHPAV P+S+LLGTWRG+GEGGFPTINSFSYGEELHFSHS 
Sbjct: 1   MDAE---TESPAPETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSP 60

Query: 61  GKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120
            KPVI Y+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQS GLVEVQKGTY+AEEKVI
Sbjct: 61  NKPVIGYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           +LQSE+VGNASKVKEI R F+LVDG L Y VQMAT   +LQPHLKA L K+
Sbjct: 121 QLQSEIVGNASKVKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

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BLAST of Csa6G134380.2 vs. TAIR10
Match: AT1G79260.1 (AT1G79260.1 Domain of unknown function DUF1794 (InterPro:IPR014878))

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-64
Identity = 117/158 (74.05%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

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BLAST of Csa6G134380.2 vs. NCBI nr
Match: gi|449444310|ref|XP_004139918.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 2.0e-91
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of Csa6G134380.2 vs. NCBI nr
Match: gi|659112544|ref|XP_008456272.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDGELPPASAPAP     SIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPP----SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGT+NAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of Csa6G134380.2 vs. NCBI nr
Match: gi|731434477|ref|XP_010645079.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vinifera])

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 134/156 (85.90%), Postives = 145/156 (92.95%), Query Frame = 1


Query: 15  PAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKLD 74
           P P  +HPA+ PLS+LLGTWRG+GEGGFPTINSFSYGEEL FSHSGKPVI+YSQ+TWKL 
Sbjct: 9   PPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAYSQRTWKLS 68

Query: 75  SKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKE 134
           S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++KLQSELVGNASKV E
Sbjct: 69  SGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELVGNASKVTE 128

Query: 135 ISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           ISRVF+LV+GELSYVVQMAT L SLQPHLKALL K+
Sbjct: 129 ISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

[Close]

BLAST of Csa6G134380.2 vs. NCBI nr
Match: gi|672163311|ref|XP_008801499.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix dactylifera])

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70
Identity = 133/170 (78.24%), Postives = 148/170 (87.06%), Query Frame = 1


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60
           MDG    +S P P P PL  HPA+ PLSFLLG WRG+GEGGFPTINSF YGEEL FSHSG
Sbjct: 1   MDGGAAGSSPPPPEPPPL--HPAIAPLSFLLGRWRGEGEGGFPTINSFRYGEELQFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KP I+YSQKTWKL S EPMHAESGYWRPKPDG+IEVVI+QSTGLVEVQKG+Y+AE+K++ 
Sbjct: 61  KPAIAYSQKTWKLTSGEPMHAESGYWRPKPDGSIEVVISQSTGLVEVQKGSYDAEQKIVT 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNA+KVKEI+RVFK+ DG LSYVVQMAT LTSLQPHLKALL K+
Sbjct: 121 LQSELVGNAAKVKEITRVFKVADGNLSYVVQMATHLTSLQPHLKALLKKI 168

[Close]

BLAST of Csa6G134380.2 vs. NCBI nr
Match: gi|695005842|ref|XP_009389385.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 130/157 (82.80%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 14  APAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKPVISYSQKTWKL 73
           APAP  +HPA+ PLS+LLG WRG+GEGGFPTINSF+YGEEL FSHSGKPVI+YSQKTWKL
Sbjct: 9   APAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGKPVIAYSQKTWKL 68

Query: 74  DSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVK 133
            S EPMHAESGYWRPKPDG+IEVVIAQSTGL EVQKGTY+AE +++ LQSELVGNASKVK
Sbjct: 69  ASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVGNASKVK 128

Query: 134 EISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           EI+RVFK+V+GELSYVVQMAT +TSLQPHLKALL KV
Sbjct: 129 EITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

The following BLAST results are available for this feature:

BLAST of Csa6G134380.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1926_ARATH	3.9e-63	74.05	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian...	[more]
Y1995_MYCMM	1.2e-27	41.14	UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marin...	[more]
Y3360_MYCUA	1.6e-27	41.14	UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcera...	[more]
Y2833_MYCPA	4.5e-27	40.38	UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium parat...	[more]
Y3611_MYCA1	2.3e-26	39.74	UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium ...	[more]

BLAST of Csa6G134380.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL2_CUCSA	1.4e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1	[more]
A5BBZ0_VITVI	1.2e-71	85.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=...	[more]
M0S6G6_MUSAM	8.8e-70	82.80	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
C6SZP1_SOYBN	3.1e-67	77.19	Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1	[more]
A0A0B2QJ30_GLYSO	3.1e-67	77.19	UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_02654...	[more]

BLAST of Csa6G134380.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79260.1	2.2e-64	74.05	Domain of unknown function DUF1794 (InterPro:IPR014878)	[more]

BLAST of Csa6G134380.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444310\|ref\|XP_004139918.1\|	2.0e-91	100.00	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sa...	[more]
gi\|659112544\|ref\|XP_008456272.1\|	3.7e-85	95.29	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis me...	[more]
gi\|731434477\|ref\|XP_010645079.1\|	1.8e-71	85.90	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vini...	[more]
gi\|672163311\|ref\|XP_008801499.1\|	2.5e-70	78.24	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix da...	[more]
gi\|695005842\|ref\|XP_009389385.1\|	1.3e-69	82.80	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acumi...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR011038	Calycin-like
IPR014878	DUF1794
IPR022939	UPF0678

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G134380	Csa6G134380	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G134380.2	Csa6G134380.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G134380.2.utr5p1	Csa6G134380.2.utr5p1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G134380.2.cds1	Csa6G134380.2.cds1	CDS
Csa6G134380.2.cds2	Csa6G134380.2.cds2	CDS
Csa6G134380.2.cds3	Csa6G134380.2.cds3	CDS
Csa6G134380.2.cds4	Csa6G134380.2.cds4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G134380.2.utr3p1	Csa6G134380.2.utr3p1	three_prime_UTR
Csa6G134380.2.utr3p2	Csa6G134380.2.utr3p2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011038	Calycin-like	unknown	SSF50814	Lipocalins	coord: 19..170 score: 3.75
IPR014878	Domain of unknown function DUF1794	PFAM	PF08768	DUF1794	coord: 24..169 score: 1.4
IPR022939	Uncharacterised protein family UPF0678	HAMAP	MF_01297	UPF0678	coord: 16..170 score: 23
None	No IPR available	PANTHER	PTHR15854	THAP4 PROTEIN	coord: 11..170 score: 1.2