Cp4.1LG16g06880 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g06880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	UPF0678 fatty acid-binding protein-like protein
Location	Cp4.1LG16 : 7199791 .. 7203539 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTACAAACCCAAGAATGCACCTAGTTCAGACTAAAGGTTAAGGACTAAAAGGTAATTTTAGTAAGTGGAAAGTTACTTTCCGTTTACGAGGGAAGCCCCGGCGCCAAGGACAAGGACTATGTTTCGTGTTCTCCGTCGGTAACAAACTGAAAACGCCAACACAAGGCGAACAAGAGAGAACGGAGTCAAAGCAGGTGAAGAAATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGGTAGCCTTTAACTCCCTGTTCTTCGTCTCTATTTGTTGTTTTCGCTGATATCATCTTAATATAATTATAATTATCTCATTCCACGCGGTTGGATTTTGCGTTTTTAGTCTAATCGGTTATCTTCGTTGTTTGGGGATTTTTTTAATACGATGATTGTGGGAGAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGGTCAAAATCGCTGTCTCTTTCTCGTGTGCTCTACTGTTACATTCAAATTCATAGGCTAAAAGAGAATTGTGGTTGAATATAGACGTGCTTATGTTCTCTGATTTTGATTTTGAGAAGAATGATTGAAACACACGGATTTGTGACATGATGCAAAATGGTTCTATGCTGTATGTGATCTAACAATATAATCGATCTTGTTTGTTGAAATGAAATCTTCCTTTTTCCCTCATCTGGCCTTGTCTTTCCCACGAAAACGAACGGCCACGTTTTCAAACCATTGAAAATCTCAGTCGCCATCTTGTAAATTGAAACTATTCAATTACTCACTCCATGGCCTACACCTTGGATTCTTAAACTATACTGTCACTGTCAACCATATCACAATTGCTACGTTAGATTCTGCAGAGTTGCAACTGCACACCAGCTGCTCGATCCAATAGCCGACACAAATACAAAAAGGTTTAGGTAATCCATTATTTGTGAAGGAAATCATGTATAAAAAAGTTGGTAGTTCATTTGAAAGTCAGATTTATGGATAGAATATGTAGTTAAAGTGGATAAGTCTGAAATGAAATTAACCATCATGGGTTTGCCTGGTGGTCAACAAGGTCATGGATCATAAGGGTACAGAGGAAATGAGTTCAATCCATGGTGACCACTTACCTAAGATTTAATTTAGTTTCCTTGACATCCGAATATTTTATAGGGTCAAGGCGGTTGTCCCGTGAGATTAAAACTGACCTAAACACTCATAGTTGTGAAAAATGAAACTAAACTGCTCAAATCCCTCCTCCATATGGATGTGTCAAAATTGATCAAACTACAAGTTTTTCTTTGTCTTAGCTGCTGATCTTCTTGTGCTCAGTTTTTTTATCTGTGCTGTGGATTTTTGAGCTTGTGGTGTTGGTGTAGACTGCCTTTCTTTATTTTCACTTGCTGTGTGCATGTTCTTCACACAACAGAAAGGAGCAGGTGTTCTGGTGAACTAGATAAGAAGGGAAATAAGCCACATAAAATCCAAGGTTCTAGGGAGGTTCTCTTAATAGGATTGAATTTAGAAATAAATCAGCTGCAATTTCTGATGATTAGATGTGACTTTTAGCTGAAGAAAAAGAAGAAAAATTGATTCATATTACTTGCTAGTGAGCTTTCACATTGCCATAAAAGCTCTGGTTTCTATAGCCAATTTTAATTTGCTTTTGGCAGTGAAATTTTATAACTAGTATTATTTGCATCAGTATCATAAACTTCTGAATATTGTTTTCCATTTTCTAAAACTGTGGAAGATTATTGCAATGCAACTAATGGAGACGTTTGTTTTACTTTCCATTTGATATAACCCGATTTTTATCTCTCTTCCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTGGGGAATGCTTCTAAGGTAACGTTTACTAGATCATCATTATTCAGGGCCATTTCAAATACGGACATATTATTTTTAGGTTTCAAATTTTGTTGTTCCATGATACTGATAGTTAATTGTCATCCCTGCTAACTATGGCAAGTAAAAACCTTATAGGATAAACGTACGTGTTAGACCTGTGTGACTTAGGGTTAAGAAGTTAAAGCCTTGCTTTGGTAGTATCAGTTTGCTCGTCCCAACAGTTTATGAACCCAAACTTATGTGTAATAGTCCAAGCCCACCGTTAGGAGATATTGTCCGCTTTGGCCCATTATATATTGCCGTCAGCCTCATGGTTTTAAAACGCGTCTACTAGAAAGAGGTTTCCACACCCTTGTAAGAAATGCTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCCTTTGGGGGCCTAGCATCCTTACTGGCATACCGCTCGGTATTTGGCTCTAATACTATTTGTAACAGCTCAAGCCCACAACTAGCAGATATTATCCACTTTGGCCTGTTACGTATCGCTGCTAGTCTCACGGTTTTAAAACGCGTCTACTAGGAAGAGGTTTCAACACCCTTATACAGAATGTTTTGTTCTCCTCTCCAACCATTGTGAGATCTCACATCGTGAAATCTACCGTTTCTATACAAATTCTTCTAAATTATAAACCCTTGAACTAAATATCATAATAGGAACCTAATGAGAGACTTTAAAATCATGAGCCAAACATCCCTTTATAACTGTACAAATGATTTGACTCTATAAGAGACGATATTTGAACCCGAAAACAGCGCGTTAGGAAAGAGATACATTATCATTAACCAATGGAAAACTGCTCGTCCCCGTTTGTATTAGATCAATACAACGTACCAGACAGAACTAGGATCTTTTTTTCCCTTCATTTTTTTTATGGCGAATGGTTTCCTCTCGTCCCCATTCGGTTTCCTTCTCCTTTTGCTCGCATTGCATGCATCAATAATTTGTAATACTGATCAACATACCAAACTCCCAGACAAAGCCAAACTATTTACCTGTCTCTATGGAACAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCGTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTGAAAGCCTCGCTTACTAAAGTTTGACGCAAGAAACGAAATGGTACACAAATCCTTTCTTTAAATTAAGAATGCAGGCTACAATAAATCTGGACTGAATTGCAATTAGCATGTTTCTATATTTCTGTAGTGTTTATTCCCCATCCTCCTCCCTCTAAAGTATTATCTAATAGAAATTTTCTCATATATTTCACTATTGCGTCAAAGTTCTTTTGGTTATTAAATTTGAAGGTGTTAGAATATTGAGGTTGTACAAAGTCTCAAATGGTACGGTGCAGTGAAGATGCTCATGGTCGTTTGAGAATGAAGTTCTTGGTTGACTGGATCAGTCTCCAAAGGGGAGAATTGTTAAGTTATGGAGTGTAAATGGCGTATAAAATAAAATAGTAAATTTTCTCATATATTTTGTTAACTTAGTAAATATAAGTTGTTTTGGTTATTAAATTTGAAAAATATCAGTTATCAACTATTAAATATATTCTTCCTCAAATAACCC

mRNA sequence

AATCTACAAACCCAAGAATGCACCTAGTTCAGACTAAAGGTTAAGGACTAAAAGGTAATTTTAGTAAGTGGAAAGTTACTTTCCGTTTACGAGGGAAGCCCCGGCGCCAAGGACAAGGACTATGTTTCGTGTTCTCCGTCGGTAACAAACTGAAAACGCCAACACAAGGCGAACAAGAGAGAACGGAGTCAAAGCAGGTGAAGAAATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCGTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTGAAAGCCTCGCTTACTAAAGTTTGACGCAAGAAACGAAATGGTGTTAGAATATTGAGGTTGTACAAAGTCTCAAATGGTACGGTGCAGTGAAGATGCTCATGGTCGTTTGAGAATGAAGTTCTTGGTTGACTGGATCAGTCTCCAAAGGGGAGAATTGTTAAGTTATGGAGTGTAAATGGCGTATAAAATAAAATAGTAAATTTTCTCATATATTTTGTTAACTTAGTAAATATAAGTTGTTTTGGTTATTAAATTTGAAAAATATCAGTTATCAACTATTAAATATATTCTTCCTCAAATAACCC

Coding sequence (CDS)

ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCGTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTGAAAGCCTCGCTTACTAAAGTTTGA

Protein sequence

MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV

Homology

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BLAST of Cp4.1LG16g06880 vs. Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 118/162 (72.84%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 3   GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQ 62
           GE PPV      HP VAPLS+LLGTWRG+G+G +PTI SF YGEEI FSHSGKPVI+Y+Q
Sbjct: 11  GESPPV------HPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQ 70

Query: 63  KTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGN 122
           KTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ I L+S++VGN
Sbjct: 71  KTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGN 130

Query: 123 ASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           ASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA L K+
Sbjct: 131 ASKVKEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

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BLAST of Cp4.1LG16g06880 vs. Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27
Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSR 70
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 71  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQ--SEVVG---NASK 130
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI ++  +  +G    A +
Sbjct: 62  APLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 131 VKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTK 164
           V  +SR+F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Cp4.1LG16g06880 vs. Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSR 70
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 71  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQ--SEVVG---NASK 130
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI ++  +  +G    A +
Sbjct: 62  TPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 131 VKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTK 164
           V  +SR+F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

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BLAST of Cp4.1LG16g06880 vs. Swiss-Prot
Match: Y6574_MYCS2 (UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_6396 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_6574 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.7e-27
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 1


Query: 12  LSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSRE 71
           + +HP +APL+ LLGTW G G G +PTI SF Y EEI F H GKP ++Y Q+T   D   
Sbjct: 2   IDLHPNIAPLAPLLGTWAGPGAGEYPTIQSFEYLEEITFGHVGKPFLTYQQRTKARDDGR 61

Query: 72  PMHAESGYWR-PKPDGTIEVVIAQSTGLVEVQKGTYN-AEEKVIM-LQSEVVG---NASK 131
           P+HAE GY R P PD  +E V+A  TG+ E+Q+GT     +++ M +++  +G   +A  
Sbjct: 62  PLHAEVGYIRVPAPD-RVEWVLAHPTGITEIQEGTLTVGGDRITMDVKATTIGLTASAKN 121

Query: 132 VKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTK 164
           V  ++R+F++   EL+Y +QM      LQ HL A+L +
Sbjct: 122 VTALARSFRITGDELTYTLQMGAVGQPLQHHLAATLRR 158

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BLAST of Cp4.1LG16g06880 vs. Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-26
Identity = 63/156 (40.38%), Postives = 92/156 (58.97%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSR 70
           P  +HP +A L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 71  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVG-----NASK 130
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I ++          +A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKE 121

Query: 131 VKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASL 162
           V  ++R F++   ELSY VQM      LQ HL A L
Sbjct: 122 VTALARWFRIDGDELSYSVQMGAVGQPLQDHLAAVL 157

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BLAST of Cp4.1LG16g06880 vs. TrEMBL
Match: A0A0A0KAL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-80
Identity = 154/170 (90.59%), Postives = 158/170 (92.94%), Query Frame = 1


Query: 1   MDGELPPV------PAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60
           MDGELPP       PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

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BLAST of Cp4.1LG16g06880 vs. TrEMBL
Match: A5BBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 9.3e-69
Identity = 130/164 (79.27%), Postives = 144/164 (87.80%), Query Frame = 1


Query: 1   MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISY 60
           MD      P P  +HPA+ PLS+LLGTWRG+G+GGFPTINSFSYGEE+ FSHSGKPVI+Y
Sbjct: 1   MDANNSARPPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAY 60

Query: 61  SQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVV 120
           SQ+TWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++ LQSE+V
Sbjct: 61  SQRTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELV 120

Query: 121 GNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           GNASKV EISR F+LV+GELSYVVQMAT L SLQPHLKA L K+
Sbjct: 121 GNASKVTEISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

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BLAST of Cp4.1LG16g06880 vs. TrEMBL
Match: M0S6G6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 126/162 (77.78%), Postives = 145/162 (89.51%), Query Frame = 1


Query: 3   GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQ 62
           G +   PAP  +HPA+APLS+LLG WRG+G+GGFPTINSF+YGEE+ FSHSGKPVI+YSQ
Sbjct: 4   GSVGSAPAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGKPVIAYSQ 63

Query: 63  KTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGN 122
           KTWKL S EPMHAESGYWRPKPDG+IEVVIAQSTGL EVQKGTY+AE +++ LQSE+VGN
Sbjct: 64  KTWKLASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVGN 123

Query: 123 ASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           ASKVKEI+R FK+V+GELSYVVQMAT +TSLQPHLKA L KV
Sbjct: 124 ASKVKEITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

[Close]

BLAST of Cp4.1LG16g06880 vs. TrEMBL
Match: M5WHK9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011091mg PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.3e-66
Identity = 123/152 (80.92%), Postives = 142/152 (93.42%), Query Frame = 1


Query: 13  SIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREP 72
           +IHPA+APLS+LLGTWRG+G+GGFPTINSFSY E++HFSHSGKP I+Y+QKTWKL+S EP
Sbjct: 73  AIHPAIAPLSYLLGTWRGQGEGGFPTINSFSYVEQLHFSHSGKPFIAYTQKTWKLNSGEP 132

Query: 73  MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRA 132
           MHAESG+WRPKPDGTIEVVI+QSTGLVEVQKGTY+AEEKVI LQSE+VGNASKV+EI+R 
Sbjct: 133 MHAESGFWRPKPDGTIEVVISQSTGLVEVQKGTYSAEEKVIKLQSELVGNASKVREITRV 192

Query: 133 FKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           FKLVD EL Y V+MAT LTSLQPHLKASL ++
Sbjct: 193 FKLVDEELFYEVKMATNLTSLQPHLKASLQRI 224

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BLAST of Cp4.1LG16g06880 vs. TrEMBL
Match: A0A0B2QJ30_GLYSO (UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_026546 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 9.7e-66
Identity = 127/159 (79.87%), Postives = 139/159 (87.42%), Query Frame = 1


Query: 7   PVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHS-GKPVISYSQKTW 66
           P  +P  IHPAVAP+S+LLGTWRG+G+GGFPTINSFSYGEE+HFSHS  KPVI Y+QKTW
Sbjct: 10  PETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSPNKPVIGYTQKTW 69

Query: 67  KLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASK 126
           KL S EPMHAESGYWRPKPDGTIEVVIAQS GLVEVQKGTY+AEEKVI LQSE+VGNASK
Sbjct: 70  KLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVIQLQSEIVGNASK 129

Query: 127 VKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           VKEI R F+LVDG L Y VQMAT   +LQPHLKASL K+
Sbjct: 130 VKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

[Close]

BLAST of Cp4.1LG16g06880 vs. TAIR10
Match: AT1G79260.1 (AT1G79260.1 Domain of unknown function DUF1794 (InterPro:IPR014878))

HSP 1 Score: 236.9 bits (603), Expect = 8.9e-63
Identity = 118/162 (72.84%), Postives = 138/162 (85.19%), Query Frame = 1


Query: 3   GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQ 62
           GE PPV      HP VAPLS+LLGTWRG+G+G +PTI SF YGEEI FSHSGKPVI+Y+Q
Sbjct: 11  GESPPV------HPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQ 70

Query: 63  KTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGN 122
           KTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ I L+S++VGN
Sbjct: 71  KTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGN 130

Query: 123 ASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           ASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA L K+
Sbjct: 131 ASKVKEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

[Close]

BLAST of Cp4.1LG16g06880 vs. NCBI nr
Match: gi|449444310|ref|XP_004139918.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 154/170 (90.59%), Postives = 158/170 (92.94%), Query Frame = 1


Query: 1   MDGELPPV------PAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60
           MDGELPP       PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of Cp4.1LG16g06880 vs. NCBI nr
Match: gi|659112544|ref|XP_008456272.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis melo])

HSP 1 Score: 307.0 bits (785), Expect = 2.0e-80
Identity = 153/166 (92.17%), Postives = 157/166 (94.58%), Query Frame = 1


Query: 1   MDGELPPV--PAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVI 60
           MDGELPP   PAP SIHPAV PLSFLLGTWRGKGDGGFPTINSFSYGEE+HFSHSGKPVI
Sbjct: 1   MDGELPPASAPAPPSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGKPVI 60

Query: 61  SYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSE 120
           SYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGT+NAEEKVI LQSE
Sbjct: 61  SYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIKLQSE 120

Query: 121 VVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           +VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 LVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of Cp4.1LG16g06880 vs. NCBI nr
Match: gi|731434477|ref|XP_010645079.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vinifera])

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-68
Identity = 130/164 (79.27%), Postives = 144/164 (87.80%), Query Frame = 1


Query: 1   MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISY 60
           MD      P P  +HPA+ PLS+LLGTWRG+G+GGFPTINSFSYGEE+ FSHSGKPVI+Y
Sbjct: 1   MDANNSARPPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGKPVIAY 60

Query: 61  SQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVV 120
           SQ+TWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEK++ LQSE+V
Sbjct: 61  SQRTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELV 120

Query: 121 GNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           GNASKV EISR F+LV+GELSYVVQMAT L SLQPHLKA L K+
Sbjct: 121 GNASKVTEISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

[Close]

BLAST of Cp4.1LG16g06880 vs. NCBI nr
Match: gi|470115333|ref|XP_004293857.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Fragaria vesca subsp. vesca])

HSP 1 Score: 265.4 bits (677), Expect = 6.7e-68
Identity = 125/152 (82.24%), Postives = 144/152 (94.74%), Query Frame = 1


Query: 13  SIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREP 72
           ++HPA+APLS+LLG+W+G+G+GGFPTINSFSYGE++HFSHSGKPVI+Y+QKTWKL+S EP
Sbjct: 11  AVHPAIAPLSYLLGSWKGQGEGGFPTINSFSYGEQLHFSHSGKPVIAYTQKTWKLNSGEP 70

Query: 73  MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRA 132
           MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI L++E+VGNA+KVKEI+R 
Sbjct: 71  MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVINLRTELVGNATKVKEITRV 130

Query: 133 FKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           FKLVD ELSY VQMAT L SLQPHLKASL +V
Sbjct: 131 FKLVDKELSYEVQMATNLNSLQPHLKASLKRV 162

[Close]

BLAST of Cp4.1LG16g06880 vs. NCBI nr
Match: gi|672163311|ref|XP_008801499.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix dactylifera])

HSP 1 Score: 265.0 bits (676), Expect = 8.7e-68
Identity = 125/162 (77.16%), Postives = 143/162 (88.27%), Query Frame = 1


Query: 3   GELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQ 62
           G  PP P P  +HPA+APLSFLLG WRG+G+GGFPTINSF YGEE+ FSHSGKP I+YSQ
Sbjct: 7   GSSPPPPEPPPLHPAIAPLSFLLGRWRGEGEGGFPTINSFRYGEELQFSHSGKPAIAYSQ 66

Query: 63  KTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGN 122
           KTWKL S EPMHAESGYWRPKPDG+IEVVI+QSTGLVEVQKG+Y+AE+K++ LQSE+VGN
Sbjct: 67  KTWKLTSGEPMHAESGYWRPKPDGSIEVVISQSTGLVEVQKGSYDAEQKIVTLQSELVGN 126

Query: 123 ASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 165
           A+KVKEI+R FK+ DG LSYVVQMAT LTSLQPHLKA L K+
Sbjct: 127 AAKVKEITRVFKVADGNLSYVVQMATHLTSLQPHLKALLKKI 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g06880 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1926_ARATH	1.6e-61	72.84	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian...	[more]
Y1995_MYCMM	2.0e-27	41.77	UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marin...	[more]
Y3360_MYCUA	3.3e-27	41.77	UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcera...	[more]
Y6574_MYCS2	9.7e-27	42.41	UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_6396 OS=Mycobac...	[more]
Y2833_MYCPA	2.8e-26	40.38	UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium parat...	[more]

BLAST of Cp4.1LG16g06880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL2_CUCSA	1.1e-80	90.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1	[more]
A5BBZ0_VITVI	9.3e-69	79.27	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=...	[more]
M0S6G6_MUSAM	2.3e-67	77.78	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
M5WHK9_PRUPE	3.3e-66	80.92	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011091mg PE=3 SV=1	[more]
A0A0B2QJ30_GLYSO	9.7e-66	79.87	UPF0678 fatty acid-binding protein-like protein OS=Glycine soja GN=glysoja_02654...	[more]

BLAST of Cp4.1LG16g06880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79260.1	8.9e-63	72.84	Domain of unknown function DUF1794 (InterPro:IPR014878)	[more]

BLAST of Cp4.1LG16g06880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444310\|ref\|XP_004139918.1\|	1.5e-80	90.59	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sa...	[more]
gi\|659112544\|ref\|XP_008456272.1\|	2.0e-80	92.17	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis me...	[more]
gi\|731434477\|ref\|XP_010645079.1\|	1.3e-68	79.27	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vini...	[more]
gi\|470115333\|ref\|XP_004293857.1\|	6.7e-68	82.24	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Fragaria v...	[more]
gi\|672163311\|ref\|XP_008801499.1\|	8.7e-68	77.16	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix da...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022939	UPF0678
IPR014878	DUF1794
IPR011038	Calycin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g06880.1	Cp4.1LG16g06880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011038	Calycin-like	unknown	SSF50814	Lipocalins	coord: 13..164 score: 1.67
IPR014878	Domain of unknown function DUF1794	PFAM	PF08768	DUF1794	coord: 18..163 score: 1.4
IPR022939	Uncharacterised protein family UPF0678	HAMAP	MF_01297	UPF0678	coord: 10..164 score: 23
None	No IPR available	PANTHER	PTHR15854	THAP4 PROTEIN	coord: 6..164 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g06880	Cucsa.118730	Cucumber (Gy14) v1	cgycpeB0290
Cp4.1LG16g06880	CmoCh20G003190	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g06880	Cla013436	Watermelon (97103) v1	cpewmB303
Cp4.1LG16g06880	Csa6G134380	Cucumber (Chinese Long) v2	cpecuB282
Cp4.1LG16g06880	MELO3C019608	Melon (DHL92) v3.5.1	cpemeB247
Cp4.1LG16g06880	ClCG02G018850	Watermelon (Charleston Gray)	cpewcgB266
Cp4.1LG16g06880	CSPI06G10880	Wild cucumber (PI 183967)	cpecpiB284
Cp4.1LG16g06880	Lsi10G015000	Bottle gourd (USVL1VR-Ls)	cpelsiB219
Cp4.1LG16g06880	MELO3C019608.2	Melon (DHL92) v3.6.1	cpemedB301
Cp4.1LG16g06880	CsaV3_6G013330	Cucumber (Chinese Long) v3	cpecucB0349
Cp4.1LG16g06880	Bhi10G000716	Wax gourd	cpewgoB0353
Cp4.1LG16g06880	CsGy6G011000	Cucumber (Gy14) v2	cgybcpeB756
Cp4.1LG16g06880	Carg03410	Silver-seed gourd	carcpeB0465

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g06880	Cucurbita pepo (Zucchini)	cpecpeB308
Cp4.1LG16g06880	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g06880	Cucurbita maxima (Rimu)	cmacpeB624
Cp4.1LG16g06880	Cucurbita maxima (Rimu)	cmacpeB625
Cp4.1LG16g06880	Cucurbita moschata (Rifu)	cmocpeB574
Cp4.1LG16g06880	Silver-seed gourd	carcpeB1473