ClCG02G018850 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G018850
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	UPF0678 fatty acid-binding protein-like protein
Location	CG_Chr02 : 33609073 .. 33613292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGACAAGAGTATGTTTTGTGTCCTCCGCCGGTTAGAAACTGAGAACACCAACACAAGGTGAACGAGAGAAAACACAAACCAGAGTCAAAACAGCCATAGAGATGGACGGAGATCTGCCGCCGGCACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTCTTACTCGGAACATGGAGAGGCAGAGGCGACGGGGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGCTTCACTTCTCCCATTCCGGCAAGGTAAACTTCAACTCCCTGTTCTTTGTCTCTATTTGTTCTTGTCGTCGATAACATCTTAATATAATTATAATCGTCTCACTTCACGCGATTGGATTTTTCGTATGTTGTCTGATCGGTTATCTTCATTGTTTGGGGATTTTTGAATACGATGATGATGGGAGAAGCCGGTGATTTCCTACACTCAAAAGACTTGGAAACTCGATTCTAGAGAGCCAATGCACGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTATCGTTGAAGTTCAGGTCAACCATCGCTATCTCTCCTTCTTGTGTACTTTACTGTTACATTGAAATTCATAGGCCGGAAGAGAATTGTTGTTGAATATAGACGTGTTTGTGTTTTCCCATTTTGATTCTGAGAAGTAATGATCGAAACTTAAAAGGCTCTATGCTGTATGAGCCCTAACAATATAATCAGGCCCCGTCTGTTGAAACGCAATCTCCCTTTTGCCTTCACCGGGCCCTGTCTTTCCCGCGAAAACGAACGGCCATCTTTTCAAACCATTGAAATCTCGGTCGCTATCTTCGAAATTTCAATGATGTGATCTCTTCAGTATCGACTCACCCCATAGCTTTAAATCTCAAATTCTTGAACCATACTGTCGCCTTCAACCATATAGTCAATTGCAAGGTCAGATTCTGCAGAGTTGCAACCGCGTGCCAACTGTTCAATGAAATGCTCAACTCAAATGTTGTCTCATGGACCTCACTCATGGCGGTTATATCGAGATGGTGGGCTGAGCACAGCTCTTTCACTGTTTGGGGCAATGCCGAGAAGTCCAGTTGTTCTCAACGACTTCACTTTTGTGAATGCAATCAAGGCCTGTTTGATCCTTTCAAATTTAAGAAATGGTGAAAAGTTCCATGCCTATGTTGAGATTTTGGTTTTGGAGCTAATATTATGGTCTATTCCTCGCTTATTGATATGTATGGAAGTGTAATGATGTTGTTAGAGCCAGGAGAGTCTTTGATTCCATGTCTCGTAAGAATATTGTTTCTTGTACTTCAGTGATTTCTGCTTATGCTCAGAATGCACATGGCAACGATGTGTTAACAGTAGGGAGTTCAGTTGTTTGAGTTATGAACATCCAAATCCTAGTATGTTAGCTAGTGTGAGTAGTGCTTGTACAGGCTTGGATAGGCTGGTTTCAGGAAAAGTCGTAGTGCAGTGATCCATCTTGGCTGTGATTCAAGCCACATAGCTGCAAATGTGCTGGTTAATATGTATGCTAAATGTGGCCGTAACTTTCAGAACATGTTTGAACTAAAACTTCGAAGAGAAACAACAAGGTTTAGGTCATTCGTTATCTATGTAGGAAATCGTGTACTACAAAAGTTTGTATTTCATTTGAAAGTCTGGTTTATGGATAAATTATGTGGTTGAAGCAAATAATTCTGAACCGTTATTAACCACCATGGATTGGTCTAGTTTAGTTGGTCAATAAGGGACATGGTTATGATAAAGGGATTACAACCTTAGAGGGAATGAGTTCAATCCATAGTGATCAACTACCTAGGATTTAATATCCTATGAGTTCCCGTGATATCCAAATGTTATAGGAGCAGACAAGTCGTCACGTGAGATTAGTCGAGGTGCACCCAAGCTAGCTTGGACACTTGCATATGCATAAAAAATAAATAAATAAATAAAAAGTTTGAAATGAAACATAACTGCTGAAATCCCTCCTCCATATGGATGTGTTAAGACTTGATCAAACTACAAGTTCTCTTTTGTCTTCCTTTTAGCTGCTGATCTTACAGTCGACATTTTTAATTGTGTTACGGATTTGATAGCTTGTGATGTAGGTGCATATTGCCTTTCTTTATTTTCAGTTGTTGTATGCATATTCTTCACACAATAGGAAGAAGCAGGTGTTACTGTGAAACTGATAAGAAGGAAAATAAGCCACTTTATTCAAAATTCTAGGGAGGTTCACTTAGTAGGATTGGATTTAAAAATAAATCAGCACCGAGTTCTGATGATGATGAGATGTGACTTTTAGATGAAGAAAGAAGAAATATAGATTCATATTGCTTAGATTCATATTGCTTGCTCTTGTGAATTTTCACATTGCCATAAAAGCTCTGATGCAAGTGTAAATCTTTCTAAATAGTTCGTTTGATCTTACATCTCTTTTGACTAATTGGAGAAGTCTCTGTTACTCTATTGGTTTGGGCATGTTGCCCTTCTTTTGTAAATTTCATACGGTAATGAAATTTGTTCCTTATAACAAGAATATAATAATAATAAGAAAATAAATAAATAAAAGCTCTGATTTCTATAGCGAATTTTTAAATTTTATAACCAGTATTTATTTGCATCAGTATCATCATCTCCTGAATTTTGTTTTCCATTGTCTAAAACTTGCAACTAATGGAGACGTCTGTTTTACGTTTCATTTAATTTAACCCAACTTGGCTCTCTCTTTCAGAAAGGAACATATGATGCAGAAGAGAAAGCGATAAAGCTCCAAAGTGAACTTGTGGGGAATGCTTCTAAGGTAACGATCAATAGATCATCATTATTCAGGGTAATTTCAAATACGTATATATTAGTATTGGGTTTCAAATTTCATTGTTCCTAGATATTGATAGTTAATTGTCATCTCTGCTAACCATGTCAAGTAAAATCTTAGAGGGTAAACCTTCGTGTTAAGAATTTAAAGCCTCCCTTTGGTACTATGAGAACGCTCGTCCCTATAGTTTATGAACCCAAGCTTAGTAGATCTGCACTTTATACTGCACACTAATTCTTTTAAATCATAAACCCATGTACTAAATATAGGAACTCAAGTTTCTATATTTATTTGTCTATACAATTCACACAAACCTAAATGTCCCACCTCTAGGCTTCATAATTTGAGACTTATTAAAATCACGAGCCAAACATCCCTTTATAGACACATCATTACAATGAATGTGTTTGACACTAGTTATACAAAGTCAATATTGGTCTAACATTTGGATAAATTGAGAGCGACATGCATGAAACTCAATTTTTTAAAGATATAATGCATAAACCCATTGATCTGTAGTTAATAAATGTTTTCTTGTTGCGTCGGTTGTTGACACTAGTTATACAAAGTCAATATTAGCCTAACATTTGGATAAACTATGTGCGACATGCATTGAACTCATTTTTTTGGGATAGAAATGCATAAACCCATTAACTTTAGGTGATAAACGTTTTCTTGTTGTGGCTTTTTTTCTTTTTTAAAAAAGACTTACTTGTCACCCTATCTGCGTTTCATATCTGCATCCGTGTATCGTAGTAGCAGATAAAGCATGCTATTTACCTACCTCTGTTGGAACAGGTGAAAGAAATAAGCAGAATATTTAAACTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTAAAAGCCTTTCTTACTAAAGTTTGACAAAAAAGAAGAAGAAAAAGAGTTTAACAAATCCTTTTATTTTCTCTTAATGGACTGAAGTTATCTAATGACTTAAACGACTTTATTGGAAGAGGATATGTTCTATAGGTGTACAACTGCGTCTTTGAGTTCTAAGAAGTTATCAAGAATACTGAAGTCCACAATATAGATATATTGAATTGCAATTAGCATATTTCTATGATTTTGTATAGGGTTGGCAATGGGGTTGGGGGAGTTTCGGTCCCCGCCCTCGTGAGAGAATTTACCAGTTAATCTCTGCGGGAACAAAGGAGAGCGAGCCAGCGAGAGTGAGTTTAATTAGGGTTTGGTTGGGTTTGAGTGAGCGAGAGTATGCGAGAGTGAGAGAGAAAGAGAGAGTGATTGTGACTTTGAGTGAGGAAAGGATGTAAGAGCGAGAGCACGAGAGTCAACAATAACATCGGGTTGGCGTCGAG

mRNA sequence

GAAGGACAAGAGTATGTTTTGTGTCCTCCGCCGGTTAGAAACTGAGAACACCAACACAAGGTGAACGAGAGAAAACACAAACCAGAGTCAAAACAGCCATAGAGATGGACGGAGATCTGCCGCCGGCACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTCTTACTCGGAACATGGAGAGGCAGAGGCGACGGGGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGCTTCACTTCTCCCATTCCGGCAAGAAGCCGGTGATTTCCTACACTCAAAAGACTTGGAAACTCGATTCTAGAGAGCCAATGCACGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTATCGTTGAAGTTCAGAAAGGAACATATGATGCAGAAGAGAAAGCGATAAAGCTCCAAAGTGAACTTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAATATTTAAACTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTAAAAGCCTTTCTTACTAAAGTTTGACAAAAAAGAAGAAGAAAAAGAGTTTAACAAATCCTTTTATTTTCTCTTAATGGACTGAAGTTATCTAATGACTTAAACGACTTTATTGGAAGAGGATATGTTCTATAGGTGTACAACTGCGTCTTTGAGTTCTAAGAAGTTATCAAGAATACTGAAGTCCACAATATAGATATATTGAATTGCAATTAGCATATTTCTATGATTTTGTATAGGGTTGGCAATGGGGTTGGGGGAGTTTCGGTCCCCGCCCTCGTGAGAGAATTTACCAGTTAATCTCTGCGGGAACAAAGGAGAGCGAGCCAGCGAGAGTGAGTTTAATTAGGGTTTGGTTGGGTTTGAGTGAGCGAGAGTATGCGAGAGTGAGAGAGAAAGAGAGAGTGATTGTGACTTTGAGTGAGGAAAGGATGTAAGAGCGAGAGCACGAGAGTCAACAATAACATCGGGTTGGCGTCGAG

Coding sequence (CDS)

ATGGACGGAGATCTGCCGCCGGCACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTCTTACTCGGAACATGGAGAGGCAGAGGCGACGGGGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGCTTCACTTCTCCCATTCCGGCAAGAAGCCGGTGATTTCCTACACTCAAAAGACTTGGAAACTCGATTCTAGAGAGCCAATGCACGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTATCGTTGAAGTTCAGAAAGGAACATATGATGCAGAAGAGAAAGCGATAAAGCTCCAAAGTGAACTTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAATATTTAAACTGGTGGATGGAGAGCTTTCCTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTAAAAGCCTTTCTTACTAAAGTTTGA

Protein sequence

MDGDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV

Homology

[Close]

BLAST of ClCG02G018850 vs. Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.1e-61
Identity = 116/163 (71.17%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 3   GDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYT 62
           G+ PP      +HP VAPLS+LLGTWRG+G+G +PTI SF YGEE+ FSHSGK PVI+YT
Sbjct: 11  GESPP------VHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGK-PVIAYT 70

Query: 63  QKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVG 122
           QKTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTG+VEVQKGTY+ +E++IKL+S+LVG
Sbjct: 71  QKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVG 130

Query: 123 NASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           NASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA L K+
Sbjct: 131 NASKVKEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

[Close]

BLAST of ClCG02G018850 vs. Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.3e-26
Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLDS 70
           P  +HP +A L+ LLGTW GRG G +PTI  F Y EE+ FSH G KP ++Y QKT     
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAAD 61

Query: 71  REPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSE-----LVGNAS 130
            +P+HAE+GY R    G +E+V+A  +GI E++ G+Y      I+++       L  +A 
Sbjct: 62  GKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAK 121

Query: 131 KVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFL 163
           +V  ++R F++   ELSY VQM      LQ HL A L
Sbjct: 122 EVTALARWFRIDGDELSYSVQMGAVGQPLQDHLAAVL 157

[Close]

BLAST of ClCG02G018850 vs. Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLDS 70
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GK P + Y QKT  +  
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVGK-PFLVYAQKTRAVAD 61

Query: 71  REPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQS-----ELVGNAS 130
             P+HAE+GY R    G +E+V+A  +GI E++ GTY A    I+++       +   A 
Sbjct: 62  GAPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAK 121

Query: 131 KVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTK 165
           +V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 EVTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

[Close]

BLAST of ClCG02G018850 vs. Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-25
Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLDS 70
           P  +HP +A L+ LLGTW GRG G +PTI  F Y EE+ FSH G KP ++Y QKT     
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAAD 61

Query: 71  REPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSE-----LVGNAS 130
            +P+HAE+GY R    G +E+V+A  +GI E++ G+Y      I+++       L   A 
Sbjct: 62  GKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAK 121

Query: 131 KVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFL 163
           +V  + R F++   +LSY VQM      LQ HL A L
Sbjct: 122 EVTALGRWFRIDGDKLSYSVQMGAVGQPLQDHLAAVL 157

[Close]

BLAST of ClCG02G018850 vs. Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.4e-25
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 1


Query: 11  PLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLDS 70
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GK P + Y QKT  +  
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVGK-PFLVYAQKTRAVAD 61

Query: 71  REPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQS-----ELVGNAS 130
             P+HAE+GY R    G +E+V+A  +GI E++ GTY A    I+++       +   A 
Sbjct: 62  GTPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAK 121

Query: 131 KVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTK 165
           +V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 EVTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

[Close]

BLAST of ClCG02G018850 vs. TrEMBL
Match: A0A0A0KAL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.1e-80
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 1   MDGDLPPA------PAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSG 60
           MDG+LPPA      PAPLSIHPAV PLSFLLGTWRG+G+GGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KKPVISYTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAI 120
           K PVISY+QKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTG+VEVQKGTY+AEEK I
Sbjct: 61  K-PVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           KLQSELVGNASKVKEISR+FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of ClCG02G018850 vs. TrEMBL
Match: A5BBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-68
Identity = 130/165 (78.79%), Postives = 146/165 (88.48%), Query Frame = 1


Query: 1   MDGDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVIS 60
           MD +    P P  +HPA+ PLS+LLGTWRG+G+GGFPTINSFSYGEEL FSHSGK PVI+
Sbjct: 1   MDANNSARPPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGK-PVIA 60

Query: 61  YTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSEL 120
           Y+Q+TWKL S EPMHAESGYWRPKPDGTIEVVIAQSTG+VEVQKGTY+AEEK +KLQSEL
Sbjct: 61  YSQRTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSEL 120

Query: 121 VGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           VGNASKV EISR+F+LV+GELSYVVQMAT L SLQPHLKA L K+
Sbjct: 121 VGNASKVTEISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

[Close]

BLAST of ClCG02G018850 vs. TrEMBL
Match: M0S6G6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67
Identity = 128/163 (78.53%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 3   GDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYT 62
           G +  APAP  +HPA+APLS+LLG WRG+G+GGFPTINSF+YGEEL FSHSGK PVI+Y+
Sbjct: 4   GSVGSAPAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGK-PVIAYS 63

Query: 63  QKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVG 122
           QKTWKL S EPMHAESGYWRPKPDG+IEVVIAQSTG+ EVQKGTYDAE + + LQSELVG
Sbjct: 64  QKTWKLASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVG 123

Query: 123 NASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           NASKVKEI+R+FK+V+GELSYVVQMAT +TSLQPHLKA L KV
Sbjct: 124 NASKVKEITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

[Close]

BLAST of ClCG02G018850 vs. TrEMBL
Match: A0A067K7H4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19711 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.0e-67
Identity = 123/165 (74.55%), Postives = 146/165 (88.48%), Query Frame = 1


Query: 1   MDGDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVIS 60
           M  D+PPAP   ++HPA+APLS+LLGTW+G G+GGFPTI+SFSYGEEL FS    KPVI+
Sbjct: 1   MSADMPPAPEAAAVHPAIAPLSYLLGTWKGHGEGGFPTISSFSYGEELQFSSISGKPVIA 60

Query: 61  YTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSEL 120
           YTQKTWKL S EPMHAESGYWRPK DG+IEVVI+QSTG+VEVQKGTY+A++K IKL S+L
Sbjct: 61  YTQKTWKLSSGEPMHAESGYWRPKSDGSIEVVISQSTGLVEVQKGTYNAQDKTIKLHSQL 120

Query: 121 VGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           VGNASKVKEI+R+F+LV+GELSYVVQMAT +TSL+PHLKA L K+
Sbjct: 121 VGNASKVKEINRVFELVNGELSYVVQMATNVTSLEPHLKAVLKKL 165

[Close]

BLAST of ClCG02G018850 vs. TrEMBL
Match: C6SZP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.5e-66
Identity = 126/159 (79.25%), Postives = 137/159 (86.16%), Query Frame = 1


Query: 7   PAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYTQKTW 66
           P  +P  IHPAVAP+S+LLGTWRG+G+GGFPTINSFSYGEELHFSHS  KPVI YTQKTW
Sbjct: 10  PETSPAVIHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSPNKPVIGYTQKTW 69

Query: 67  KLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVGNASK 126
           KL S EPMHAESGYWRPKPDGTIEVVIAQS G+VEVQKGTY AEEK I+LQSE+VGNASK
Sbjct: 70  KLSSGEPMHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVIQLQSEIVGNASK 129

Query: 127 VKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           VKEI R F+LVDG L Y VQMAT   +LQPHLKA L K+
Sbjct: 130 VKEIRRCFQLVDGNLCYDVQMATNKITLQPHLKASLKKL 168

[Close]

BLAST of ClCG02G018850 vs. TAIR10
Match: AT1G79260.1 (AT1G79260.1 Domain of unknown function DUF1794 (InterPro:IPR014878))

HSP 1 Score: 235.0 bits (598), Expect = 3.4e-62
Identity = 116/163 (71.17%), Postives = 138/163 (84.66%), Query Frame = 1


Query: 3   GDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYT 62
           G+ PP      +HP VAPLS+LLGTWRG+G+G +PTI SF YGEE+ FSHSGK PVI+YT
Sbjct: 11  GESPP------VHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGK-PVIAYT 70

Query: 63  QKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVG 122
           QKTWKL+S  PMHAESGY+RP+PDG+IEVVIAQSTG+VEVQKGTY+ +E++IKL+S+LVG
Sbjct: 71  QKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVG 130

Query: 123 NASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           NASKVKEISR F+LVDG+LSYVV+M+T    LQPHLKA L K+
Sbjct: 131 NASKVKEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

[Close]

BLAST of ClCG02G018850 vs. NCBI nr
Match: gi|449444310|ref|XP_004139918.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-79
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 1


Query: 1   MDGDLPPA------PAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSG 60
           MDG+LPPA      PAPLSIHPAV PLSFLLGTWRG+G+GGFPTINSFSYGEELHFSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KKPVISYTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAI 120
           K PVISY+QKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTG+VEVQKGTY+AEEK I
Sbjct: 61  K-PVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 120

Query: 121 KLQSELVGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           KLQSELVGNASKVKEISR+FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 KLQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of ClCG02G018850 vs. NCBI nr
Match: gi|659112544|ref|XP_008456272.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.7e-79
Identity = 151/167 (90.42%), Postives = 159/167 (95.21%), Query Frame = 1


Query: 1   MDGDLPPA--PAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPV 60
           MDG+LPPA  PAP SIHPAV PLSFLLGTWRG+GDGGFPTINSFSYGEELHFSHSGK PV
Sbjct: 1   MDGELPPASAPAPPSIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSGK-PV 60

Query: 61  ISYTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQS 120
           ISY+QKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTG+VEVQKGT++AEEK IKLQS
Sbjct: 61  ISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIKLQS 120

Query: 121 ELVGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           ELVGNASKVKEISR+FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 ELVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of ClCG02G018850 vs. NCBI nr
Match: gi|731434477|ref|XP_010645079.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vinifera])

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-68
Identity = 130/165 (78.79%), Postives = 146/165 (88.48%), Query Frame = 1


Query: 1   MDGDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVIS 60
           MD +    P P  +HPA+ PLS+LLGTWRG+G+GGFPTINSFSYGEEL FSHSGK PVI+
Sbjct: 1   MDANNSARPPPPPVHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSGK-PVIA 60

Query: 61  YTQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSEL 120
           Y+Q+TWKL S EPMHAESGYWRPKPDGTIEVVIAQSTG+VEVQKGTY+AEEK +KLQSEL
Sbjct: 61  YSQRTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSEL 120

Query: 121 VGNASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           VGNASKV EISR+F+LV+GELSYVVQMAT L SLQPHLKA L K+
Sbjct: 121 VGNASKVTEISRVFELVNGELSYVVQMATNLNSLQPHLKALLKKI 164

[Close]

BLAST of ClCG02G018850 vs. NCBI nr
Match: gi|672163311|ref|XP_008801499.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix dactylifera])

HSP 1 Score: 264.2 bits (674), Expect = 1.5e-67
Identity = 126/163 (77.30%), Postives = 142/163 (87.12%), Query Frame = 1


Query: 3   GDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYT 62
           G  PP P P  +HPA+APLSFLLG WRG G+GGFPTINSF YGEEL FSHSGK P I+Y+
Sbjct: 7   GSSPPPPEPPPLHPAIAPLSFLLGRWRGEGEGGFPTINSFRYGEELQFSHSGK-PAIAYS 66

Query: 63  QKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVG 122
           QKTWKL S EPMHAESGYWRPKPDG+IEVVI+QSTG+VEVQKG+YDAE+K + LQSELVG
Sbjct: 67  QKTWKLTSGEPMHAESGYWRPKPDGSIEVVISQSTGLVEVQKGSYDAEQKIVTLQSELVG 126

Query: 123 NASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           NA+KVKEI+R+FK+ DG LSYVVQMAT LTSLQPHLKA L K+
Sbjct: 127 NAAKVKEITRVFKVADGNLSYVVQMATHLTSLQPHLKALLKKI 168

[Close]

BLAST of ClCG02G018850 vs. NCBI nr
Match: gi|695005842|ref|XP_009389385.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-67
Identity = 128/163 (78.53%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 3   GDLPPAPAPLSIHPAVAPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSGKKPVISYT 62
           G +  APAP  +HPA+APLS+LLG WRG+G+GGFPTINSF+YGEEL FSHSGK PVI+Y+
Sbjct: 4   GSVGSAPAPPPLHPAIAPLSYLLGRWRGQGEGGFPTINSFAYGEELIFSHSGK-PVIAYS 63

Query: 63  QKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYDAEEKAIKLQSELVG 122
           QKTWKL S EPMHAESGYWRPKPDG+IEVVIAQSTG+ EVQKGTYDAE + + LQSELVG
Sbjct: 64  QKTWKLASGEPMHAESGYWRPKPDGSIEVVIAQSTGLAEVQKGTYDAENRIVTLQSELVG 123

Query: 123 NASKVKEISRIFKLVDGELSYVVQMATGLTSLQPHLKAFLTKV 166
           NASKVKEI+R+FK+V+GELSYVVQMAT +TSLQPHLKA L KV
Sbjct: 124 NASKVKEITRVFKVVNGELSYVVQMATVITSLQPHLKALLKKV 165

The following BLAST results are available for this feature:

BLAST of ClCG02G018850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1926_ARATH	6.1e-61	71.17	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian...	[more]
Y2833_MYCPA	8.3e-26	42.04	UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium parat...	[more]
Y1995_MYCMM	3.1e-25	40.88	UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marin...	[more]
Y3611_MYCA1	4.1e-25	41.40	UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium ...	[more]
Y3360_MYCUA	5.4e-25	40.88	UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcera...	[more]

BLAST of ClCG02G018850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL2_CUCSA	9.1e-80	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1	[more]
A5BBZ0_VITVI	1.2e-68	78.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=...	[more]
M0S6G6_MUSAM	1.4e-67	78.53	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A067K7H4_JATCU	3.0e-67	74.55	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19711 PE=4 SV=1	[more]
C6SZP1_SOYBN	1.5e-66	79.25	Uncharacterized protein OS=Glycine max GN=GLYMA_08G160000 PE=2 SV=1	[more]

BLAST of ClCG02G018850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79260.1	3.4e-62	71.17	Domain of unknown function DUF1794 (InterPro:IPR014878)	[more]

BLAST of ClCG02G018850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444310\|ref\|XP_004139918.1\|	1.3e-79	88.89	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sa...	[more]
gi\|659112544\|ref\|XP_008456272.1\|	1.7e-79	90.42	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis me...	[more]
gi\|731434477\|ref\|XP_010645079.1\|	1.8e-68	78.79	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Vitis vini...	[more]
gi\|672163311\|ref\|XP_008801499.1\|	1.5e-67	77.30	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Phoenix da...	[more]
gi\|695005842\|ref\|XP_009389385.1\|	1.9e-67	78.53	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Musa acumi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011038	Calycin-like
IPR014878	DUF1794

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006810	transport
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G018850.1	ClCG02G018850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011038	Calycin-like	unknown	SSF50814	Lipocalins	coord: 13..165 score: 2.03
IPR014878	Domain of unknown function DUF1794	PFAM	PF08768	DUF1794	coord: 18..164 score: 4.8
None	No IPR available	PANTHER	PTHR15854	THAP4 PROTEIN	coord: 4..165 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G018850	Csa6G134380	Cucumber (Chinese Long) v2	cuwcgB452
ClCG02G018850	MELO3C019608	Melon (DHL92) v3.5.1	mewcgB107
ClCG02G018850	Cla013436	Watermelon (97103) v1	wcgwmB197
ClCG02G018850	Cla97C02G044780	Watermelon (97103) v2	wcgwmbB138
ClCG02G018850	Bhi10G000716	Wax gourd	wcgwgoB298
ClCG02G018850	CSPI06G10880	Wild cucumber (PI 183967)	cpiwcgB472
ClCG02G018850	Cucsa.118730	Cucumber (Gy14) v1	cgywcgB179
ClCG02G018850	CmaCh20G002940	Cucurbita maxima (Rimu)	cmawcgB481
ClCG02G018850	CmoCh20G003190	Cucurbita moschata (Rifu)	cmowcgB479
ClCG02G018850	Lsi10G015000	Bottle gourd (USVL1VR-Ls)	lsiwcgB054
ClCG02G018850	Cp4.1LG16g06880	Cucurbita pepo (Zucchini)	cpewcgB266
ClCG02G018850	CsGy6G011000	Cucumber (Gy14) v2	cgybwcgB413
ClCG02G018850	MELO3C019608.2	Melon (DHL92) v3.6.1	medwcgB087
ClCG02G018850	Carg03410	Silver-seed gourd	carwcgB0327
ClCG02G018850	CsaV3_6G013330	Cucumber (Chinese Long) v3	cucwcgB470

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G018850	Cucurbita pepo (Zucchini)	cpewcgB658
ClCG02G018850	Silver-seed gourd	carwcgB1027
ClCG02G018850	Cucurbita maxima (Rimu)	cmawcgB527
ClCG02G018850	Cucurbita maxima (Rimu)	cmawcgB549
ClCG02G018850	Cucurbita moschata (Rifu)	cmowcgB525
ClCG02G018850	Cucumber (Chinese Long) v2	cuwcgB542
ClCG02G018850	Melon (DHL92) v3.5.1	mewcgB203