CU142491 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU142491
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 9349272 .. 9349525 (-)
Sequence length255
The following sequences are available for this feature:

transcribed_cluster sequence

CTTTGAGCGATGACTACCTCAATGGTACCATCGGGCTTGGGACGCCAATAGCCACTCTCAGCATGCATTGGCTCTTTAGAATCGAGTTTCCATGTCTTTTGACTGTAGGAAATCACTGGCTTCTCCCATCATCATCGTATTAAAAAATCCCCAAAACAAGGAAGATAACCGATTAGACTAAATAAGCAAAATCCAATCGAGTGAAGTGGGACGATTTTAATTATATTAAGATGATATCAAACGACGATAATGAAT
Library categoryESTs
gynoecious flower library1
BLAST of CU142491 vs. Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-12
Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+Y+QKTWKL+S  PMHAESGY+RP+PDG+IEVVIAQ
Sbjct: 57  KPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQ 96

Query: 63  122
           
Sbjct: 117 96

BLAST of CU142491 vs. TrEMBL
Match: A0A0A0KAL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 100

Query: 63  122
           
Sbjct: 121 100

BLAST of CU142491 vs. TrEMBL
Match: A0A124SHQ1_CYNCS (Calycin-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011378 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-13
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+YSQKTWKL+S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 50  KPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQ 89

Query: 63  122
           
Sbjct: 110 89

BLAST of CU142491 vs. TrEMBL
Match: B9HYD5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18310g PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.9e-13
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+Y+QKTWKL+S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 54  KPVIAYNQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQ 93

Query: 63  122
           
Sbjct: 114 93

BLAST of CU142491 vs. TrEMBL
Match: A5BBZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.4e-13
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+YSQ+TWKL S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 55  KPVIAYSQRTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQ 94

Query: 63  122
           
Sbjct: 115 94

BLAST of CU142491 vs. TrEMBL
Match: A0A151RPZ2_CAJCA (UPF0678 fatty acid-binding protein-like protein At1g79260 family OS=Cajanus cajan GN=KK1_033902 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.3e-13
Identity = 37/40 (92.50%), Postives = 37/40 (92.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI YSQKTWKL S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 59  KPVIGYSQKTWKLISGEPMHAESGYWRPKPDGTIEVVIAQ 98

Query: 63  122
           
Sbjct: 119 98

BLAST of CU142491 vs. NCBI nr
Match: gi|449444310|ref|XP_004139918.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 100

Query: 63  122
           
Sbjct: 121 100

BLAST of CU142491 vs. NCBI nr
Match: gi|659112544|ref|XP_008456272.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-15
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 57  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 96

Query: 63  122
           
Sbjct: 117 96

BLAST of CU142491 vs. NCBI nr
Match: gi|976926377|gb|KVI10243.1| (Calycin-like protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 85.1 bits (209), Expect = 6.3e-14
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+YSQKTWKL+S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 50  KPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQ 89

Query: 63  122
           
Sbjct: 110 89

BLAST of CU142491 vs. NCBI nr
Match: gi|224112357|ref|XP_002316162.1| (hypothetical protein POPTR_0010s18310g [Populus trichocarpa])

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+Y+QKTWKL+S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 54  KPVIAYNQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQ 93

Query: 63  122
           
Sbjct: 114 93

BLAST of CU142491 vs. NCBI nr
Match: gi|743801361|ref|XP_011014423.1| (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Populus euphratica])

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -2

Query: 3   KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQ 62
           KPVI+Y+QKTWKL+S EPMHAESGYWRPKPDGTIEVVIAQ
Sbjct: 54  KPVIAYNQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQ 93

Query: 63  122
           
Sbjct: 114 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y1926_ARATH1.6e-1280.00UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian... [more]
Match NameE-valueIdentityDescription
A0A0A0KAL2_CUCSA4.0e-15100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G134380 PE=3 SV=1[more]
A0A124SHQ1_CYNCS2.2e-1392.50Calycin-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011378 PE=4 SV=... [more]
B9HYD5_POPTR4.9e-1390.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18310g PE=4 SV=1[more]
A5BBZ0_VITVI6.4e-1390.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01130 PE=3 SV=... [more]
A0A151RPZ2_CAJCA8.3e-1392.50UPF0678 fatty acid-binding protein-like protein At1g79260 family OS=Cajanus caja... [more]
Match NameE-valueIdentityDescription
gi|449444310|ref|XP_004139918.1|1.2e-15100.00PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis sa... [more]
gi|659112544|ref|XP_008456272.1|1.2e-15100.00PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucumis me... [more]
gi|976926377|gb|KVI10243.1|6.3e-1492.50Calycin-like protein [Cynara cardunculus var. scolymus][more]
gi|224112357|ref|XP_002316162.1|1.4e-1390.00hypothetical protein POPTR_0010s18310g [Populus trichocarpa][more]
gi|743801361|ref|XP_011014423.1|1.4e-1390.00PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Populus eu... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G134380Csa6G134380gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0096742G0096742EST