Csa6G093640 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G093640
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor, putative; contains IPR005333 (Transcription factor, TCP)
LocationChr6 : 6417103 .. 6417981 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

mRNA sequence

ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

Coding sequence (CDS)

ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

Protein sequence

MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR*
Homology
[Close]
BLAST of Csa6G093640 vs. Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-60
Identity = 142/283 (50.18%), Postives = 181/283 (63.96%), Query Frame = 1 

Query: 32  PTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALC 91
           PTT  +IKDF +++S  D+  +  + N N  QL PKR+SNKDRH KV+GRGRRIRMPALC
Sbjct: 43  PTT--EIKDFQIVVSASDKEPNKKSQNQN--QLGPKRSSNKDRHTKVEGRGRRIRMPALC 102

Query: 92  AARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVS 151
           AAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A   + S+H    S
Sbjct: 103 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAATSNHHQGGS 162

Query: 152 VSASLT-------PKIEAVPRTNWAMMGA-NLSRSHMASQGFWPSLGGIG-----TGFVS 211
           ++A L            +    NW + G   +SRS + + G WP++ G G     TG +S
Sbjct: 163 LTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSGVPTTGLMS 222

Query: 212 ENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPS 271
           E  G    + GF GF+  G  +G ++F +++G  H Q+PGLELGLSQ+GN   G+LNP S
Sbjct: 223 EGAGY---RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGN--VGVLNPQS 282

Query: 272 FSQIYHQIGQNRDSSAQPL----------EQDQAPEKDDSQES 292
           F+QIY Q+GQ +  +   +           Q ++ EKDDSQ S
Sbjct: 283 FTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]
BLAST of Csa6G093640 vs. Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.8e-31
Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 1 

Query: 9   NNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKR 68
           ++ H P  P     SS         TSS      +I       ++ S  N   K+  PKR
Sbjct: 6   DHNHRPNFPLQLLDSS---------TSSSSTSLAII-------STTSEPNSEPKKPPPKR 65

Query: 69  TSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGS 128
           TS KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+
Sbjct: 66  TSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGT 125

Query: 129 GTIPASALHAVGVSLSDHDSSVSVS 154
           GTIPA+   ++ +SL    SS+S +
Sbjct: 126 GTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]
BLAST of Csa6G093640 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 67  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 126
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 127 GSGTIPASALHAVGVSLSDHDSSVSV 153
           G+GTIPA+   ++ +SL    SS+S+
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSL 197

[Close]
BLAST of Csa6G093640 vs. Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-28
Identity = 74/155 (47.74%), Postives = 93/155 (60.00%), Query Frame = 1 

Query: 3   DQNNNNNNKHHPLLPS--PATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 62
           +Q+NNN      L+PS  P + S  LTT    +T++ +                      
Sbjct: 7   NQSNNNTTGSAHLVPSMGPISGSVSLTTTAPNSTTTTV---------------------- 66

Query: 63  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 122
                P +  +KDRH KVDGRGRRIRMPA+CAARVFQLTREL HK+DGETI+WLLQQAEP
Sbjct: 67  TAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEP 126

Query: 123 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSAS 156
           +IIAATG+GTIPA+ +  + +SL    S++S   S
Sbjct: 127 AIIAATGTGTIPAN-ISTLNISLRSSGSTLSAPLS 138

[Close]
BLAST of Csa6G093640 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-28
Identity = 77/162 (47.53%), Postives = 95/162 (58.64%), Query Frame = 1 

Query: 1   MADQNNNNNNKHHPL-------LPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNS 60
           ++D  NNNN+            L   + S  P +TPP        +D TL  ++     +
Sbjct: 3   LSDIRNNNNDTAAVATGGGARQLVDASLSIVPRSTPP--------EDSTLATTSSTATAT 62

Query: 61  NSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQW 120
            +            + S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+W
Sbjct: 63  TT------------KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEW 122

Query: 121 LLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSAS 156
           LLQQAEP+I+AATG+GTIPA+    + VSL    S++S   S
Sbjct: 123 LLQQAEPAIVAATGTGTIPAN-FSTLSVSLRSSGSTLSAPPS 143

[Close]
BLAST of Csa6G093640 vs. TrEMBL
Match: A0A0A0KC88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093640 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 1.7e-166
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1 

Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN
Sbjct: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
           NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM
Sbjct: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240
           ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE
Sbjct: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240

Query: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR
Sbjct: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 292

[Close]
BLAST of Csa6G093640 vs. TrEMBL
Match: B9RMA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.7e-74
Identity = 159/307 (51.79%), Postives = 200/307 (65.15%), Query Frame = 1 

Query: 6   NNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLA 65
           NN + +  P   +P    +        + +++IKDF ++I+NKD N          KQLA
Sbjct: 7   NNPHKQDLPTFLNPLQKETMAENSSSSSKTAEIKDFQIMIANKDDNK---------KQLA 66

Query: 66  PKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAA 125
           PKR+SNKDRHKKVDGRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAA
Sbjct: 67  PKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 126

Query: 126 TGSGTIPASALHAVGVSLSDHDSSVSVS-----ASLTPKIEAVPRTNWAMMGANLSRSHM 185
           TG+GTIPASAL A G S+S   +SVS         + P + +  R NW MM +NL R ++
Sbjct: 127 TGTGTIPASALAAAGASVSQQGNSVSAGLHSKMEGIGPSVGSRDRANWTMMNSNLGRCNV 186

Query: 186 ASQGFWP-SLGGIGTGFVSENPGSIM----------PKFGFHGFELQGMNLGSVNFPAMI 245
            + G WP S+GGIG G++S +  S M          PKFGFHG EL  +N+G ++F +M 
Sbjct: 187 -TNGMWPSSVGGIGAGYISNSSQSAMNFGNESANALPKFGFHGVELPNINMGLMSFYSMF 246

Query: 246 GNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDS----SAQPLEQDQAPEK 293
              +QQ+PGLELGLSQDG+   G++N  + SQ Y Q+GQNR        Q   Q Q P+K
Sbjct: 247 NATNQQVPGLELGLSQDGHT--GVMNSQALSQFYQQMGQNRTGLNSLVQQQQHQQQPPDK 301

[Close]
BLAST of Csa6G093640 vs. TrEMBL
Match: A0A067K4V4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.9e-74
Identity = 158/276 (57.25%), Postives = 190/276 (68.84%), Query Frame = 1 

Query: 36  SDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARV 95
           S+IKDF ++ISNKD +N         KQLAPKR+SNKDRHKKVDGRGRRIRMPALCAAR+
Sbjct: 8   SEIKDFQIMISNKDDSNK--------KQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARI 67

Query: 96  FQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVS-- 155
           FQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL A G S+S  ++SVS    
Sbjct: 68  FQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQENSVSTGLQ 127

Query: 156 ---ASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSE------NPGSI 215
                L   I +  R NW MM +NL RS++ S   WPS+GGIGTGF+S       N G+ 
Sbjct: 128 TKMEGLGQTIGSRERANWTMMTSNLGRSNL-SAAVWPSVGGIGTGFISNSGQSATNFGNE 187

Query: 216 MPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYH 275
             KFGFHG E   +N+G ++  +M    +QQ PGLELGLSQDGN   G+LN  + SQ Y 
Sbjct: 188 SSKFGFHGIEFPNINMGLMSVYSMFSGANQQFPGLELGLSQDGN--IGVLNSQALSQFYQ 247

Query: 276 QIGQNR--------DSSAQPLEQDQAPEKDDSQESR 293
           Q+GQ+R            Q  +++Q P+KDDSQ SR
Sbjct: 248 QMGQSRPAGLNSFNQQQQQQQQEEQPPDKDDSQGSR 272

[Close]
BLAST of Csa6G093640 vs. TrEMBL
Match: A0A061E406_THECC (Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.2e-72
Identity = 160/309 (51.78%), Postives = 200/309 (64.72%), Query Frame = 1 

Query: 10  NKHHP------LLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQ 69
           + HHP      L+P    + +    P      ++IK+F ++I++KD N          KQ
Sbjct: 6   SNHHPQEVPTFLIPPQKANMAENNKP------AEIKNFQIMIASKDDNK---------KQ 65

Query: 70  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 129
           LAPKR+SNKDRHKKVDGRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSII
Sbjct: 66  LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 125

Query: 130 AATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAV-------PRTNWAMMGANLS 189
           AATG+GTIPASAL A G S+S+  +  SV A L  KIE +        R NW+MM  N+ 
Sbjct: 126 AATGTGTIPASALAAAGTSVSEQGN--SVPAGLHTKIEGLGSGIGSRDRNNWSMMSGNIE 185

Query: 190 RSHMASQGFWPSLGGIGTGFV-------------SENPGSIMPKFGFHGFELQGMNLGSV 249
           RSH+ S G WPS+ GI +GF              SEN  +I PK+GFHG E   MN+G V
Sbjct: 186 RSHIPS-GAWPSINGIASGFAQGSGQLTSASNFGSENSNNI-PKYGFHGLEFPHMNMGFV 245

Query: 250 NFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAP 293
           +F +++   +QQ+PGLELGLSQD +   G+LN  +FSQ Y Q+GQ R       +Q Q  
Sbjct: 246 SFSSLLNGSNQQVPGLELGLSQDPH--FGVLNSQAFSQFYQQMGQQRGGVGSLNQQQQLS 293

[Close]
BLAST of Csa6G093640 vs. TrEMBL
Match: W9R7U5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017473 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 9.5e-72
Identity = 154/273 (56.41%), Postives = 196/273 (71.79%), Query Frame = 1 

Query: 36  SDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARV 95
           ++IKDF +II+NK+    ++NNN   +QLAPKR+SNKDRHKKVDGRGRRIRMPALCAARV
Sbjct: 7   AEIKDFQIIIANKE----DANNNTKKQQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARV 66

Query: 96  FQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSAS 155
           FQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL A G S+S+  +  SVS++
Sbjct: 67  FQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGSSVSEQGN--SVSSA 126

Query: 156 LTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFV-----------SENPGSI 215
           L  ++E + R NWA+M  NL RSH    G WP +GG G+GF             EN   +
Sbjct: 127 LHTRMEDLGRANWAVMSGNLGRSH----GIWPGIGGFGSGFFPNSGQSTTSFGGENANML 186

Query: 216 MPKFGFHGFEL-QGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIY 275
           +PKFGFHGF+   G+NLG+V+F  +IG  +QQ+PGLELGLSQDG ++R +LN  + +Q+ 
Sbjct: 187 LPKFGFHGFDFPPGVNLGAVSFNTVIGGGNQQVPGLELGLSQDG-HIR-VLNSQTLAQLQ 246

Query: 276 HQIGQNRDSSA-------QPLEQDQAPEKDDSQ 290
            Q  Q    S+         + + ++PEKDDSQ
Sbjct: 247 QQQQQMGQRSSGGDGGGDSLVPRHRSPEKDDSQ 267

[Close]
BLAST of Csa6G093640 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 235.0 bits (598), Expect = 6.1e-62
Identity = 142/283 (50.18%), Postives = 181/283 (63.96%), Query Frame = 1 

Query: 32  PTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALC 91
           PTT  +IKDF +++S  D+  +  + N N  QL PKR+SNKDRH KV+GRGRRIRMPALC
Sbjct: 43  PTT--EIKDFQIVVSASDKEPNKKSQNQN--QLGPKRSSNKDRHTKVEGRGRRIRMPALC 102

Query: 92  AARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVS 151
           AAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A   + S+H    S
Sbjct: 103 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAATSNHHQGGS 162

Query: 152 VSASLT-------PKIEAVPRTNWAMMGA-NLSRSHMASQGFWPSLGGIG-----TGFVS 211
           ++A L            +    NW + G   +SRS + + G WP++ G G     TG +S
Sbjct: 163 LTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSGVPTTGLMS 222

Query: 212 ENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPS 271
           E  G    + GF GF+  G  +G ++F +++G  H Q+PGLELGLSQ+GN   G+LNP S
Sbjct: 223 EGAGY---RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGN--VGVLNPQS 282

Query: 272 FSQIYHQIGQNRDSSAQPL----------EQDQAPEKDDSQES 292
           F+QIY Q+GQ +  +   +           Q ++ EKDDSQ S
Sbjct: 283 FTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]
BLAST of Csa6G093640 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 136.0 bits (341), Expect = 3.8e-32
Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 1 

Query: 9   NNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKR 68
           ++ H P  P     SS         TSS      +I       ++ S  N   K+  PKR
Sbjct: 6   DHNHRPNFPLQLLDSS---------TSSSSTSLAII-------STTSEPNSEPKKPPPKR 65

Query: 69  TSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGS 128
           TS KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+
Sbjct: 66  TSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGT 125

Query: 129 GTIPASALHAVGVSLSDHDSSVSVS 154
           GTIPA+   ++ +SL    SS+S +
Sbjct: 126 GTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]
BLAST of Csa6G093640 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 131.3 bits (329), Expect = 9.5e-31
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 1 

Query: 67  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 126
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 127 GSGTIPASALHAVGVSLSDHDSSVSV 153
           G+GTIPA+   ++ +SL    SS+S+
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSL 197

[Close]
BLAST of Csa6G093640 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 77/162 (47.53%), Postives = 95/162 (58.64%), Query Frame = 1 

Query: 1   MADQNNNNNNKHHPL-------LPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNS 60
           ++D  NNNN+            L   + S  P +TPP        +D TL  ++     +
Sbjct: 3   LSDIRNNNNDTAAVATGGGARQLVDASLSIVPRSTPP--------EDSTLATTSSTATAT 62

Query: 61  NSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQW 120
            +            + S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+W
Sbjct: 63  TT------------KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEW 122

Query: 121 LLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSAS 156
           LLQQAEP+I+AATG+GTIPA+    + VSL    S++S   S
Sbjct: 123 LLQQAEPAIVAATGTGTIPAN-FSTLSVSLRSSGSTLSAPPS 143

[Close]
BLAST of Csa6G093640 vs. TAIR10
Match: AT1G35560.1 (AT1G35560.1 TCP family transcription factor )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 74/155 (47.74%), Postives = 93/155 (60.00%), Query Frame = 1 

Query: 3   DQNNNNNNKHHPLLPS--PATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 62
           +Q+NNN      L+PS  P + S  LTT    +T++ +                      
Sbjct: 7   NQSNNNTTGSAHLVPSMGPISGSVSLTTTAPNSTTTTV---------------------- 66

Query: 63  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 122
                P +  +KDRH KVDGRGRRIRMPA+CAARVFQLTREL HK+DGETI+WLLQQAEP
Sbjct: 67  TAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEP 126

Query: 123 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSAS 156
           +IIAATG+GTIPA+ +  + +SL    S++S   S
Sbjct: 127 AIIAATGTGTIPAN-ISTLNISLRSSGSTLSAPLS 138

[Close]
BLAST of Csa6G093640 vs. NCBI nr
Match: gi|778711824|ref|XP_011656799.1| (PREDICTED: transcription factor TCP20-like [Cucumis sativus])

HSP 1 Score: 593.2 bits (1528), Expect = 2.5e-166
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1 

Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN
Sbjct: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
           NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM
Sbjct: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240
           ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE
Sbjct: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240

Query: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR
Sbjct: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 292

[Close]
BLAST of Csa6G093640 vs. NCBI nr
Match: gi|659119854|ref|XP_008459878.1| (PREDICTED: transcription factor TCP20-like [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 3.8e-159
Identity = 282/294 (95.92%), Postives = 285/294 (96.94%), Query Frame = 1 

Query: 1   MADQ--NNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNN 60
           MADQ  NNNNNNKHHPLLPSPATSSSPLTTPPLPT SSDIKDFTLIISNKDQNNSNSN+N
Sbjct: 1   MADQNNNNNNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSN 60

Query: 61  INNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120
            NNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA
Sbjct: 61  NNNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120

Query: 121 EPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180
           EPSIIAATGSGTIPASALHA GVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS
Sbjct: 121 EPSIIAATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180

Query: 181 HMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPG 240
           HMA+ GFWPSLGGIGTGFVSENPGSIMPKFGFHGFE QGMNLGSVNFP MIGNQHQQIPG
Sbjct: 181 HMATPGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPG 240

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNR+SSA PLEQDQAPEKDDSQESR
Sbjct: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]
BLAST of Csa6G093640 vs. NCBI nr
Match: gi|719978206|ref|XP_010249094.1| (PREDICTED: transcription factor TCP20-like [Nelumbo nucifera])

HSP 1 Score: 287.3 bits (734), Expect = 2.9e-74
Identity = 155/272 (56.99%), Postives = 190/272 (69.85%), Query Frame = 1 

Query: 36  SDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARV 95
           ++IKDF ++I+ KD+           KQLAPKR+S KDRH KVDGRGRRIRMPALCAAR+
Sbjct: 29  AEIKDFQIVIAEKDEGK---------KQLAPKRSSTKDRHTKVDGRGRRIRMPALCAARI 88

Query: 96  FQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVS-- 155
           FQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL A G S+S   +SVS    
Sbjct: 89  FQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSVSAGFQ 148

Query: 156 ---ASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENPGS------- 215
                L P I +  RTNW+++G NL RSH+A+ G WPS+ G G GFV  +  S       
Sbjct: 149 SKIDELGPGIGSGSRTNWSVIGNNLGRSHVAT-GLWPSVSGFGPGFVHSSAPSTSNLGTE 208

Query: 216 ---IMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFS 275
               M + GFHGFEL G NLG ++F +++G  +QQ+PGLELGLSQDG+   G+LNP + S
Sbjct: 209 SSNYMTRIGFHGFELPGSNLGPMSFSSIMGGNNQQLPGLELGLSQDGH--IGVLNPQALS 268

Query: 276 QIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           Q Y Q+GQ R ++    +Q Q P KDDSQ SR
Sbjct: 269 QFYQQMGQGRGTTGPMQQQQQPPAKDDSQGSR 288

[Close]
BLAST of Csa6G093640 vs. NCBI nr
Match: gi|255547638|ref|XP_002514876.1| (PREDICTED: transcription factor TCP20 [Ricinus communis])

HSP 1 Score: 287.0 bits (733), Expect = 3.8e-74
Identity = 159/307 (51.79%), Postives = 200/307 (65.15%), Query Frame = 1 

Query: 6   NNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLA 65
           NN + +  P   +P    +        + +++IKDF ++I+NKD N          KQLA
Sbjct: 7   NNPHKQDLPTFLNPLQKETMAENSSSSSKTAEIKDFQIMIANKDDNK---------KQLA 66

Query: 66  PKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAA 125
           PKR+SNKDRHKKVDGRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAA
Sbjct: 67  PKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 126

Query: 126 TGSGTIPASALHAVGVSLSDHDSSVSVS-----ASLTPKIEAVPRTNWAMMGANLSRSHM 185
           TG+GTIPASAL A G S+S   +SVS         + P + +  R NW MM +NL R ++
Sbjct: 127 TGTGTIPASALAAAGASVSQQGNSVSAGLHSKMEGIGPSVGSRDRANWTMMNSNLGRCNV 186

Query: 186 ASQGFWP-SLGGIGTGFVSENPGSIM----------PKFGFHGFELQGMNLGSVNFPAMI 245
            + G WP S+GGIG G++S +  S M          PKFGFHG EL  +N+G ++F +M 
Sbjct: 187 -TNGMWPSSVGGIGAGYISNSSQSAMNFGNESANALPKFGFHGVELPNINMGLMSFYSMF 246

Query: 246 GNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDS----SAQPLEQDQAPEK 293
              +QQ+PGLELGLSQDG+   G++N  + SQ Y Q+GQNR        Q   Q Q P+K
Sbjct: 247 NATNQQVPGLELGLSQDGHT--GVMNSQALSQFYQQMGQNRTGLNSLVQQQQHQQQPPDK 301

[Close]
BLAST of Csa6G093640 vs. NCBI nr
Match: gi|1009129337|ref|XP_015881712.1| (PREDICTED: transcription factor TCP20-like [Ziziphus jujuba])

HSP 1 Score: 286.2 bits (731), Expect = 6.5e-74
Identity = 163/311 (52.41%), Postives = 206/311 (66.24%), Query Frame = 1 

Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           M  + +N N +  P L   +  +      P     ++IKDF ++I+NK+ N         
Sbjct: 1   MEPKGSNYNPQEVPTLLGHSPKADMAENKP-----AEIKDFQIMIANKEDNK-------- 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
            KQLAPKR SNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHK+DGETIQWLLQQAEP
Sbjct: 61  -KQLAPKRNSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIE--------AVPRTNWAMMG 180
           SIIAATG+GTIPASAL   G S+S+  +  SVS++L  K+E        +V R NWA M 
Sbjct: 121 SIIAATGTGTIPASALALTGSSVSEQGN--SVSSALHTKMEELGPGGIGSVGRANWAFMS 180

Query: 181 ANLSRSHMASQGFWPSLGGIGTGFVSENPG-----------SIMPKFGFHGFELQGMNLG 240
            NL RS + S G WPSL G+G+GF+ +NPG           +++PKFGFHGF+  GMNLG
Sbjct: 181 GNLGRSQLPS-GVWPSLSGVGSGFI-QNPGQSTSNFASENLNMLPKFGFHGFDFPGMNLG 240

Query: 241 SVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQ 293
           S++FP ++   +QQ+PGLELGLSQDG+    ++N  + SQ+  Q+GQ          Q +
Sbjct: 241 SMSFPTILSGNNQQVPGLELGLSQDGH--FRVINSEALSQLQQQMGQR--------PQQE 283

The following BLAST results are available for this feature:
BLAST of Csa6G093640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP20_ARATH1.1e-6050.18Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1[more]
TCP15_ARATH6.8e-3152.41Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1[more]
TCP14_ARATH1.7e-2975.58Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1[more]
TCP23_ARATH4.1e-2847.74Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1[more]
TCP8_ARATH4.1e-2847.53Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1[more]
BLAST of Csa6G093640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC88_CUCSA1.7e-166100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093640 PE=4 SV=1[more]
B9RMA7_RICCO2.7e-7451.79Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1[more]
A0A067K4V4_JATCU5.9e-7457.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1[more]
A0A061E406_THECC7.2e-7251.78Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1[more]
W9R7U5_9ROSA9.5e-7256.41Uncharacterized protein OS=Morus notabilis GN=L484_017473 PE=4 SV=1[more]
BLAST of Csa6G093640 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27010.16.1e-6250.18 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20[more]
AT1G69690.13.8e-3252.41 TCP family transcription factor [more]
AT3G47620.19.5e-3175.58 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14[more]
AT1G58100.12.3e-2947.53 TCP family transcription factor [more]
AT1G35560.12.3e-2947.74 TCP family transcription factor [more]
BLAST of Csa6G093640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711824|ref|XP_011656799.1|2.5e-166100.00PREDICTED: transcription factor TCP20-like [Cucumis sativus][more]
gi|659119854|ref|XP_008459878.1|3.8e-15995.92PREDICTED: transcription factor TCP20-like [Cucumis melo][more]
gi|719978206|ref|XP_010249094.1|2.9e-7456.99PREDICTED: transcription factor TCP20-like [Nelumbo nucifera][more]
gi|255547638|ref|XP_002514876.1|3.8e-7451.79PREDICTED: transcription factor TCP20 [Ricinus communis][more]
gi|1009129337|ref|XP_015881712.1|6.5e-7452.41PREDICTED: transcription factor TCP20-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0065007 biological regulation
biological_process GO:0048856 anatomical structure development
biological_process GO:0009987 cellular process
biological_process GO:0050789 regulation of biological process
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
biological_process GO:0030001 metal ion transport
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU084502cucumber EST collection version 3.0transcribed_cluster
CU084810cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G093640.1Csa6G093640.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU084810CU084810transcribed_cluster
CU084502CU084502transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 69..166
score: 7.7
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 71..125
score: 27
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 261..273
score: 3.9E-63coord: 36..157
score: 3.9
NoneNo IPR availablePANTHERPTHR31072:SF4TRANSCRIPTION FACTOR TCP20-RELATEDcoord: 36..157
score: 3.9E-63coord: 261..273
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G093640Cla001506Watermelon (97103) v1cuwmB537
Csa6G093640MELO3C022331Melon (DHL92) v3.5.1cumeB442
Csa6G093640ClCG06G001980Watermelon (Charleston Gray)cuwcgB476
Csa6G093640Lsi09G017430Bottle gourd (USVL1VR-Ls)culsiB402
Csa6G093640MELO3C022331.2Melon (DHL92) v3.6.1cumedB422
Csa6G093640Cla97C06G111310Watermelon (97103) v2cuwmbB468
Csa6G093640Bhi12G002157Wax gourdcuwgoB533
Csa6G093640CSPI03G25370Wild cucumber (PI 183967)cpicuB155
Csa6G093640CSPI06G07660Wild cucumber (PI 183967)cpicuB314
Csa6G093640Cucsa.349500Cucumber (Gy14) v1cgycuB490
Csa6G093640CmaCh08G000050Cucurbita maxima (Rimu)cmacuB903
Csa6G093640CmaCh17G014290Cucurbita maxima (Rimu)cmacuB367
Csa6G093640CmoCh17G013720Cucurbita moschata (Rifu)cmocuB358
Csa6G093640CmoCh08G000050Cucurbita moschata (Rifu)cmocuB889
Csa6G093640Cp4.1LG17g09250Cucurbita pepo (Zucchini)cpecuB322
Csa6G093640Cp4.1LG01g12010Cucurbita pepo (Zucchini)cpecuB464
Csa6G093640CsGy6G007710Cucumber (Gy14) v2cgybcuB282
Csa6G093640CsGy3G023810Cucumber (Gy14) v2cgybcuB143
Csa6G093640Carg11585Silver-seed gourdcarcuB0012
Csa6G093640Carg03826Silver-seed gourdcarcuB0995
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa6G093640Csa3G564320Cucumber (Chinese Long) v2cucuB117
The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G093640Cucurbita pepo (Zucchini)cpecuB626
Csa6G093640Cucurbita pepo (Zucchini)cpecuB874
Csa6G093640Wax gourdcuwgoB639