Cp4.1LG17g09250 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCACCATCAGCAGATATCAAAGACTTCAGTATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGGTGATGATTATTGAAGAAGACGACAGGGTTTGGGATTTGTAGGTTTGTGGAAGGAAGGAGACACCAAAACGAGCACGACCAAGATTAAGGATTGCTTCATATTTGCGGTGTGTTTTTTTAGTGTTGTTCAAATTCAGGTAATTTTTTCTTTTCTCCTTAACAGTAACTTTTTCTTTTTTTTTTTGGTTTTAAAAGCCAAATATACTCTTTGAATTTTTAGAAGAAATAGCAACACCTTGGTTTTAAGATCAAAATGAAAACCCAGAATTTGATGGGTTTATGGAATAAGGTTTTTTTTTTAAAGAAAAAAAAGAAAAAAAAAAAAAAGGGTTTTGATTTTAGGGTTTGATTTGCAACATGCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGACTTTCATTTCTTCAATATTGAGGTGTGTGTTTTTTTATATAAATAATTTGTAGGGAAAAAATGATTGTATTATTAGTAATTGTTTGATGCATGATAAAGCAAAATACCAATTCCATCCATCTCTATAATTGTTTAATGATTTCACCAATAAACCACACACATACCTATGATTACAAATTTAATTTTTGTAAATTTCCAGCATCATCATTGCATCAAAACACAAAACTATGTTCAAAATTTTAGAAACCTAATTATTCTTAAATTAGGTTTCTAAATTCCTAATTATAATCGTTCATTGGCTAAGCCCACAATCCACAGGCCCATTTTTGGCAACCCAATACCCCTATATCCACTCAACAATTTAAAACAGATTGGATGGATGTATTAATTAAAACAGGCATACGTTCCCATCCAAGTGGGCCTGAAAGATTGAAATGGACCGGGCCATCATGGGATCAATCCATATGCAACGCCTTCTCAAACATTCCTGTGGCATATGAATACGCCCTTCCAACCTGTTACATATT ACATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCACCATCAGCAGATATCAAAGACTTCAGTATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGTGTTGTTCAAATTCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGACTTTCATTTCTTCAATATTGAGGTGTGTGTTTTTTTATATAAATAATTTGTAGGGAAAAAATGATTGTATTATTAGTAATTGTTTGATGCATGATAAAGCAAAATACCAATTCCATCCATCTCTATAATTGTTTAATGATTTCACCAATAAACCACACACATACCTATGATTACAAATTTAATTTTTGTAAATTTCCAGCATCATCATTGCATCAAAACACAAAACTATGTTCAAAATTTTAGAAACCTAATTATTCTTAAATTAGGTTTCTAAATTCCTAATTATAATCGTTCATTGGCTAAGCCCACAATCCACAGGCCCATTTTTGGCAACCCAATACCCCTATATCCACTCAACAATTTAAAACAGATTGGATGGATGTATTAATTAAAACAGGCATACGTTCCCATCCAAGTGGGCCTGAAAGATTGAAATGGACCGGGCCATCATGGGATCAATCCATATGCAACGCCTTCTCAAACATTCCTGTGGCATATGAATACGCCCTTCCAACCTGTTACATATT ATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCACCATCAGCAGATATCAAAGACTTCAGTATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGTGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGTGTTGTTCAAATTCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGA MAEHNNKKPSPPASTPTTITPPPPPPSADIKDFSIIIASKDENKHHQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSSVVQIQVKFEEKSGLVARLL
BLAST of Cp4.1LG17g09250 vs. Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57 Identity = 155/310 (50.00%), Postives = 195/310 (62.90%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.4e-30 Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26 Identity = 97/229 (42.36%), Postives = 114/229 (49.78%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.0e-26 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25 Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TrEMBL
Match: A0A0A0KC88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093640 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.9e-112 Identity = 218/283 (77.03%), Postives = 246/283 (86.93%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TrEMBL
Match: W9R7U5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017473 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.3e-72 Identity = 159/268 (59.33%), Postives = 199/268 (74.25%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TrEMBL
Match: B9RMA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 6.2e-71 Identity = 162/273 (59.34%), Postives = 197/273 (72.16%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TrEMBL
Match: A0A067K4V4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.5e-69 Identity = 154/269 (57.25%), Postives = 195/269 (72.49%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TrEMBL
Match: A0A061E406_THECC (Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.5e-69 Identity = 165/292 (56.51%), Postives = 204/292 (69.86%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20) HSP 1 Score: 224.6 bits (571), Expect = 8.3e-59 Identity = 155/310 (50.00%), Postives = 195/310 (62.90%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor ) HSP 1 Score: 133.7 bits (335), Expect = 1.9e-31 Identity = 68/112 (60.71%), Postives = 87/112 (77.68%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14) HSP 1 Score: 121.3 bits (303), Expect = 9.9e-28 Identity = 97/229 (42.36%), Postives = 114/229 (49.78%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor ) HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27 Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. TAIR10
Match: AT5G51910.1 (AT5G51910.1 TCP family transcription factor ) HSP 1 Score: 118.2 bits (295), Expect = 8.4e-27 Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. NCBI nr
Match: gi|659119854|ref|XP_008459878.1| (PREDICTED: transcription factor TCP20-like [Cucumis melo]) HSP 1 Score: 419.9 bits (1078), Expect = 3.8e-114 Identity = 221/283 (78.09%), Postives = 249/283 (87.99%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. NCBI nr
Match: gi|778711824|ref|XP_011656799.1| (PREDICTED: transcription factor TCP20-like [Cucumis sativus]) HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-112 Identity = 218/283 (77.03%), Postives = 246/283 (86.93%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. NCBI nr
Match: gi|703077735|ref|XP_010090667.1| (hypothetical protein L484_017473 [Morus notabilis]) HSP 1 Score: 279.6 bits (714), Expect = 6.2e-72 Identity = 159/268 (59.33%), Postives = 199/268 (74.25%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. NCBI nr
Match: gi|255547638|ref|XP_002514876.1| (PREDICTED: transcription factor TCP20 [Ricinus communis]) HSP 1 Score: 275.8 bits (704), Expect = 8.9e-71 Identity = 162/273 (59.34%), Postives = 197/273 (72.16%), Query Frame = 1
BLAST of Cp4.1LG17g09250 vs. NCBI nr
Match: gi|719978206|ref|XP_010249094.1| (PREDICTED: transcription factor TCP20-like [Nelumbo nucifera]) HSP 1 Score: 272.7 bits (696), Expect = 7.5e-70 Identity = 165/291 (56.70%), Postives = 200/291 (68.73%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |