CmaCh08G000050 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G000050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTCP family transcription factor family protein
LocationCma_Chr08 : 34378 .. 35208 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCAGCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAGCAAACCCCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTGGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCCGCCTCCGCCCTCCACGCTGCAGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAGGACGATTCCGAACAATCGAGGTGA

mRNA sequence

ATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCAGCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAGCAAACCCCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTGGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCCGCCTCCGCCCTCCACGCTGCAGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAGGACGATTCCGAACAATCGAGGTGA

Coding sequence (CDS)

ATGGCAGAGCACAACAACAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCAGCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAGCAAACCCCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTGGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCCGCCTCCGCCCTCCACGCTGCAGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCCGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAGGACGATTCCGAACAATCGAGGTGA

Protein sequence

MAEHNNKKPSPPASTPTTITPPPPASADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR
Homology
[Close]
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.4e-56
Identity = 154/310 (49.68%), Postives = 194/310 (62.58%), Query Frame = 1 

Query: 16  PTTITPPPP-----------ASA-----------DIKDFNIIIASKDE-----SKPHQQL 75
           P  + PPPP           ASA           +IKDF I++++ D+     S+   QL
Sbjct: 12  PNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQL 71

Query: 76  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 135
            PKR+SNKDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIA
Sbjct: 72  GPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIA 131

Query: 136 ATGSGTIPASAL-HAAGVSVSDQETSISAAL--TPKLDG----VARP-NWAMMGA-NLNR 195
           ATGSGTIPASAL  +A  S   Q  S++A L  +  LDG      RP NW + G   ++R
Sbjct: 132 ATGSGTIPASALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSR 191

Query: 196 SHMATAGFWPSLGGIG-----TGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQ 255
           S + T G WP++ G G     TG +SE +G    + GF GF+F G  +G M+F +I+G  
Sbjct: 192 SSLPT-GLWPNVAGFGSGVPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGGN 251

Query: 256 HQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSL---------EQDQ 276
           H Q +PGLELGLSQEGN   G+LNP S++QIY Q+ Q +  + G  L          Q +
Sbjct: 252 HNQ-MPGLELGLSQEGN--VGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQE 311

[Close]
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27
Identity = 74/133 (55.64%), Postives = 94/133 (70.68%), Query Frame = 1 

Query: 5   NNKKPSPPASTPTTITPPPPASADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDG 64
           +N +P+ P     + T     S  I    I   S+  S+P +   PKRTS KDRH KV+G
Sbjct: 7   HNHRPNFPLQLLDSSTSSSSTSLAI----ISTTSEPNSEPKKP-PPKRTSTKDRHTKVEG 66

Query: 65  RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAG 124
           RGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+GTIPA+   +  
Sbjct: 67  RGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPAN-FTSLN 126

Query: 125 VSVSDQETSISAA 138
           +S+    +S+SAA
Sbjct: 127 ISLRSSRSSLSAA 133

[Close]
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 97/229 (42.36%), Postives = 114/229 (49.78%), Query Frame = 1 

Query: 51  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 110
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 111 GSGTIPAS------ALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMAT 170
           G+GTIPA+      +L ++G S+S      SAA T        PN     A L +     
Sbjct: 173 GTGTIPANFTSLNISLRSSGSSMSLPSHFRSAAST------FSPNNIFSPAMLQQQQQQQ 232

Query: 171 AGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLEL 230
            G     GG+                GFH    QG    S  FP I              
Sbjct: 233 RG-----GGV----------------GFHHPHLQGRAPTSSLFPGIDNFTPTTSFLNFHN 292

Query: 231 GLSQEGNNLRGMLNPPSYSQI-----YHQIEQ--NRDSSGGGSLEQDQA 267
              QEG+     LN     +I      HQ +Q    D  GG +L+   +
Sbjct: 293 PTKQEGDQDSEELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNS 314

[Close]
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-26
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1 

Query: 52  RTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATG 111
           + S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEP+I+AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 112 SGTIPASALHAAGVSVSDQETSISA 137
           +GTIPA+      VS+    +++SA
Sbjct: 117 TGTIPAN-FSTLSVSLRSSGSTLSA 140

[Close]
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1 

Query: 49  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 108
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 109 ATGSGTIPASALHAAG 125
           ATG+GT+PA A+   G
Sbjct: 111 ATGTGTVPAIAVSVNG 126

[Close]
BLAST of CmaCh08G000050 vs. TrEMBL
Match: A0A0A0KC88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093640 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 218/284 (76.76%), Postives = 245/284 (86.27%), Query Frame = 1 

Query: 3   EHNNKKPSPPASTPTTITPP-PPASADIKDFNIIIASKDESKPH-------QQLAPKRTS 62
           +H+   PSP  S+    TPP P  S+DIKDF +II++KD++  +       +QLAPKRTS
Sbjct: 11  KHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTS 70

Query: 63  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 122
           NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT
Sbjct: 71  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 130

Query: 123 IPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLG 182
           IPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ GFWPSLG
Sbjct: 131 IPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLG 190

Query: 183 GIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNN 242
           GIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELGLSQ+GNN
Sbjct: 191 GIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELGLSQDGNN 250

Query: 243 LRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277
           LRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++SR
Sbjct: 251 LRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQESR 292

[Close]
BLAST of CmaCh08G000050 vs. TrEMBL
Match: W9R7U5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017473 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 158/268 (58.96%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 27  ADIKDFNIIIASKDESKPH---QQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLT 86
           A+IKDF IIIA+K+++  +   QQLAPKR+SNKDRHKKVDGRGRRIRMPALCAARVFQLT
Sbjct: 7   AEIKDFQIIIANKEDANNNTKKQQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARVFQLT 66

Query: 87  RELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLD 146
           RELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL AAG SVS+Q  S+S+AL  +++
Sbjct: 67  RELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGSSVSEQGNSVSSALHTRME 126

Query: 147 GVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFV-----------SENSGSIMPKFGF 206
            + R NWA+M  NL RSH    G WP +GG G+GF             EN+  ++PKFGF
Sbjct: 127 DLGRANWAVMSGNLGRSH----GIWPGIGGFGSGFFPNSGQSTTSFGGENANMLLPKFGF 186

Query: 207 HGFEF-QGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQ 266
           HGF+F  G+NLG+++F T+IG  +QQ VPGLELGLSQ+G ++R +LN  + +Q+  Q +Q
Sbjct: 187 HGFDFPPGVNLGAVSFNTVIGGGNQQ-VPGLELGLSQDG-HIR-VLNSQTLAQLQQQQQQ 246

Query: 267 NRDSSGGGS------LEQDQAPEKDDSE 274
               S GG       + + ++PEKDDS+
Sbjct: 247 MGQRSSGGDGGGDSLVPRHRSPEKDDSQ 267

[Close]
BLAST of CmaCh08G000050 vs. TrEMBL
Match: B9RMA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 162/274 (59.12%), Postives = 198/274 (72.26%), Query Frame = 1 

Query: 26  SADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRE 85
           +A+IKDF I+IA+KD++K  +QLAPKR+SNKDRHKKVDGRGRRIRMPALCAAR+FQLTRE
Sbjct: 36  TAEIKDFQIMIANKDDNK--KQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRE 95

Query: 86  LGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGV 145
           LGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL AAG SVS Q  S+SA L  K++G+
Sbjct: 96  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQGNSVSAGLHSKMEGI 155

Query: 146 A-------RPNWAMMGANLNRSHMATAGFWP-SLGGIGTGFVSENSGSIM---------- 205
                   R NW MM +NL R ++ T G WP S+GGIG G++S +S S M          
Sbjct: 156 GPSVGSRDRANWTMMNSNLGRCNV-TNGMWPSSVGGIGAGYISNSSQSAMNFGNESANAL 215

Query: 206 PKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYH 265
           PKFGFHG E   +N+G M+F ++  N   Q VPGLELGLSQ+G+   G++N  + SQ Y 
Sbjct: 216 PKFGFHGVELPNINMGLMSFYSMF-NATNQQVPGLELGLSQDGHT--GVMNSQALSQFYQ 275

Query: 266 QIEQNRDSSGGGSL-----EQDQAPEKDDSEQSR 277
           Q+ QNR  +G  SL      Q Q P+KDDS+ SR
Sbjct: 276 QMGQNR--TGLNSLVQQQQHQQQPPDKDDSQGSR 301

[Close]
BLAST of CmaCh08G000050 vs. TrEMBL
Match: A0A061E406_THECC (Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.2e-70
Identity = 165/293 (56.31%), Postives = 207/293 (70.65%), Query Frame = 1 

Query: 12  PASTPTTITPPPPAS-------ADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDG 71
           P   PT + PP  A+       A+IK+F I+IASKD++K  +QLAPKR+SNKDRHKKVDG
Sbjct: 10  PQEVPTFLIPPQKANMAENNKPAEIKNFQIMIASKDDNK--KQLAPKRSSNKDRHKKVDG 69

Query: 72  RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAG 131
           RGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL AAG
Sbjct: 70  RGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAG 129

Query: 132 VSVSDQETSISAALTPKLDGVA-------RPNWAMMGANLNRSHMATAGFWPSLGGIGTG 191
            SVS+Q  S+ A L  K++G+        R NW+MM  N+ RSH+  +G WPS+ GI +G
Sbjct: 130 TSVSEQGNSVPAGLHTKIEGLGSGIGSRDRNNWSMMSGNIERSHI-PSGAWPSINGIASG 189

Query: 192 FV-------------SENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLEL 251
           F              SENS +I PK+GFHG EF  MN+G ++F +++   +QQ VPGLEL
Sbjct: 190 FAQGSGQLTSASNFGSENSNNI-PKYGFHGLEFPHMNMGFVSFSSLLNGSNQQ-VPGLEL 249

Query: 252 GLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSL-EQDQAPEKDDSEQSR 277
           GLSQ+ +   G+LN  ++SQ Y Q+ Q R   G GSL +Q Q  +KDDS+ S+
Sbjct: 250 GLSQDPH--FGVLNSQAFSQFYQQMGQQR--GGVGSLNQQQQLSDKDDSQGSK 293

[Close]
BLAST of CmaCh08G000050 vs. TrEMBL
Match: A0A067K4V4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.9e-70
Identity = 156/270 (57.78%), Postives = 195/270 (72.22%), Query Frame = 1 

Query: 27  ADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTREL 86
           ++IKDF I+I++KD+S   +QLAPKR+SNKDRHKKVDGRGRRIRMPALCAAR+FQLTREL
Sbjct: 8   SEIKDFQIMISNKDDSNK-KQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTREL 67

Query: 87  GHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVA 146
           GHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL AAG SVS QE S+S  L  K++G+ 
Sbjct: 68  GHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQENSVSTGLQTKMEGLG 127

Query: 147 -------RPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVSE------NSGSIMPKFGFH 206
                  R NW MM +NL RS+++ A  WPS+GGIGTGF+S       N G+   KFGFH
Sbjct: 128 QTIGSRERANWTMMTSNLGRSNLSAA-VWPSVGGIGTGFISNSGQSATNFGNESSKFGFH 187

Query: 207 GFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNR 266
           G EF  +N+G M+  ++    +QQ  PGLELGLSQ+GN   G+LN  + SQ Y Q+ Q+R
Sbjct: 188 GIEFPNINMGLMSVYSMFSGANQQ-FPGLELGLSQDGN--IGVLNSQALSQFYQQMGQSR 247

Query: 267 DSSGGG-------SLEQDQAPEKDDSEQSR 277
            +             +++Q P+KDDS+ SR
Sbjct: 248 PAGLNSFNQQQQQQQQEEQPPDKDDSQGSR 272

[Close]
BLAST of CmaCh08G000050 vs. TAIR10
Match: AT3G27010.1 (AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-57
Identity = 154/310 (49.68%), Postives = 194/310 (62.58%), Query Frame = 1 

Query: 16  PTTITPPPP-----------ASA-----------DIKDFNIIIASKDE-----SKPHQQL 75
           P  + PPPP           ASA           +IKDF I++++ D+     S+   QL
Sbjct: 12  PNFLNPPPPPRNQGLVDDDAASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQL 71

Query: 76  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 135
            PKR+SNKDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIA
Sbjct: 72  GPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIA 131

Query: 136 ATGSGTIPASAL-HAAGVSVSDQETSISAAL--TPKLDG----VARP-NWAMMGA-NLNR 195
           ATGSGTIPASAL  +A  S   Q  S++A L  +  LDG      RP NW + G   ++R
Sbjct: 132 ATGSGTIPASALASSAATSNHHQGGSLTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSR 191

Query: 196 SHMATAGFWPSLGGIG-----TGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQ 255
           S + T G WP++ G G     TG +SE +G    + GF GF+F G  +G M+F +I+G  
Sbjct: 192 SSLPT-GLWPNVAGFGSGVPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGGN 251

Query: 256 HQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSL---------EQDQ 276
           H Q +PGLELGLSQEGN   G+LNP S++QIY Q+ Q +  + G  L          Q +
Sbjct: 252 HNQ-MPGLELGLSQEGN--VGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQE 311

[Close]
BLAST of CmaCh08G000050 vs. TAIR10
Match: AT1G69690.1 (AT1G69690.1 TCP family transcription factor )

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-28
Identity = 74/133 (55.64%), Postives = 94/133 (70.68%), Query Frame = 1 

Query: 5   NNKKPSPPASTPTTITPPPPASADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDG 64
           +N +P+ P     + T     S  I    I   S+  S+P +   PKRTS KDRH KV+G
Sbjct: 7   HNHRPNFPLQLLDSSTSSSSTSLAI----ISTTSEPNSEPKKP-PPKRTSTKDRHTKVEG 66

Query: 65  RGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAG 124
           RGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+GTIPA+   +  
Sbjct: 67  RGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPAN-FTSLN 126

Query: 125 VSVSDQETSISAA 138
           +S+    +S+SAA
Sbjct: 127 ISLRSSRSSLSAA 133

[Close]
BLAST of CmaCh08G000050 vs. TAIR10
Match: AT3G47620.1 (AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 121.3 bits (303), Expect = 9.2e-28
Identity = 97/229 (42.36%), Postives = 114/229 (49.78%), Query Frame = 1 

Query: 51  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 110
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 111 GSGTIPAS------ALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMAT 170
           G+GTIPA+      +L ++G S+S      SAA T        PN     A L +     
Sbjct: 173 GTGTIPANFTSLNISLRSSGSSMSLPSHFRSAAST------FSPNNIFSPAMLQQQQQQQ 232

Query: 171 AGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLEL 230
            G     GG+                GFH    QG    S  FP I              
Sbjct: 233 RG-----GGV----------------GFHHPHLQGRAPTSSLFPGIDNFTPTTSFLNFHN 292

Query: 231 GLSQEGNNLRGMLNPPSYSQI-----YHQIEQ--NRDSSGGGSLEQDQA 267
              QEG+     LN     +I      HQ +Q    D  GG +L+   +
Sbjct: 293 PTKQEGDQDSEELNSEKKRRIQTTSDLHQQQQQHQHDQIGGYTLQSSNS 314

[Close]
BLAST of CmaCh08G000050 vs. TAIR10
Match: AT1G58100.1 (AT1G58100.1 TCP family transcription factor )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 61/85 (71.76%), Postives = 72/85 (84.71%), Query Frame = 1 

Query: 52  RTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATG 111
           + S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEP+I+AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 112 SGTIPASALHAAGVSVSDQETSISA 137
           +GTIPA+      VS+    +++SA
Sbjct: 117 TGTIPAN-FSTLSVSLRSSGSTLSA 140

[Close]
BLAST of CmaCh08G000050 vs. TAIR10
Match: AT5G51910.1 (AT5G51910.1 TCP family transcription factor )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 57/76 (75.00%), Postives = 68/76 (89.47%), Query Frame = 1 

Query: 49  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 108
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 109 ATGSGTIPASALHAAG 125
           ATG+GT+PA A+   G
Sbjct: 111 ATGTGTVPAIAVSVNG 126

[Close]
BLAST of CmaCh08G000050 vs. NCBI nr
Match: gi|659119854|ref|XP_008459878.1| (PREDICTED: transcription factor TCP20-like [Cucumis melo])

HSP 1 Score: 413.7 bits (1062), Expect = 2.5e-112
Identity = 220/284 (77.46%), Postives = 247/284 (86.97%), Query Frame = 1 

Query: 3   EHNNKKPSPPASTPTTITPP-PPASADIKDFNIIIASKDESKPH-------QQLAPKRTS 62
           +H+   PSP  S+    TPP P  S+DIKDF +II++KD++  +       +QLAPKRTS
Sbjct: 13  KHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSNNNNKQLAPKRTS 72

Query: 63  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 122
           NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT
Sbjct: 73  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 132

Query: 123 IPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLG 182
           IPASALHAAGVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMAT GFWPSLG
Sbjct: 133 IPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATPGFWPSLG 192

Query: 183 GIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNN 242
           GIGTGFVSEN GSIMPKFGFHGFEFQGMNLGS+NFP +IGNQHQQ +PGLELGLSQ+GNN
Sbjct: 193 GIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQ-IPGLELGLSQDGNN 252

Query: 243 LRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277
           LRGMLNPPS+SQIYHQI QNR+SS    LEQDQAPEKDDS++SR
Sbjct: 253 LRGMLNPPSFSQIYHQIGQNRESS-APPLEQDQAPEKDDSQESR 294

[Close]
BLAST of CmaCh08G000050 vs. NCBI nr
Match: gi|778711824|ref|XP_011656799.1| (PREDICTED: transcription factor TCP20-like [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.7e-111
Identity = 218/284 (76.76%), Postives = 245/284 (86.27%), Query Frame = 1 

Query: 3   EHNNKKPSPPASTPTTITPP-PPASADIKDFNIIIASKDESKPH-------QQLAPKRTS 62
           +H+   PSP  S+    TPP P  S+DIKDF +II++KD++  +       +QLAPKRTS
Sbjct: 11  KHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTS 70

Query: 63  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 122
           NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT
Sbjct: 71  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 130

Query: 123 IPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLG 182
           IPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ GFWPSLG
Sbjct: 131 IPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLG 190

Query: 183 GIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNN 242
           GIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELGLSQ+GNN
Sbjct: 191 GIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELGLSQDGNN 250

Query: 243 LRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277
           LRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++SR
Sbjct: 251 LRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQESR 292

[Close]
BLAST of CmaCh08G000050 vs. NCBI nr
Match: gi|703077735|ref|XP_010090667.1| (hypothetical protein L484_017473 [Morus notabilis])

HSP 1 Score: 277.7 bits (709), Expect = 2.2e-71
Identity = 158/268 (58.96%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 27  ADIKDFNIIIASKDESKPH---QQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLT 86
           A+IKDF IIIA+K+++  +   QQLAPKR+SNKDRHKKVDGRGRRIRMPALCAARVFQLT
Sbjct: 7   AEIKDFQIIIANKEDANNNTKKQQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARVFQLT 66

Query: 87  RELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLD 146
           RELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL AAG SVS+Q  S+S+AL  +++
Sbjct: 67  RELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGSSVSEQGNSVSSALHTRME 126

Query: 147 GVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFV-----------SENSGSIMPKFGF 206
            + R NWA+M  NL RSH    G WP +GG G+GF             EN+  ++PKFGF
Sbjct: 127 DLGRANWAVMSGNLGRSH----GIWPGIGGFGSGFFPNSGQSTTSFGGENANMLLPKFGF 186

Query: 207 HGFEF-QGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQ 266
           HGF+F  G+NLG+++F T+IG  +QQ VPGLELGLSQ+G ++R +LN  + +Q+  Q +Q
Sbjct: 187 HGFDFPPGVNLGAVSFNTVIGGGNQQ-VPGLELGLSQDG-HIR-VLNSQTLAQLQQQQQQ 246

Query: 267 NRDSSGGGS------LEQDQAPEKDDSE 274
               S GG       + + ++PEKDDS+
Sbjct: 247 MGQRSSGGDGGGDSLVPRHRSPEKDDSQ 267

[Close]
BLAST of CmaCh08G000050 vs. NCBI nr
Match: gi|719978206|ref|XP_010249094.1| (PREDICTED: transcription factor TCP20-like [Nelumbo nucifera])

HSP 1 Score: 276.2 bits (705), Expect = 6.3e-71
Identity = 166/292 (56.85%), Postives = 200/292 (68.49%), Query Frame = 1 

Query: 7   KKPSPPASTPTTITPPPPASAD-----IKDFNIIIASKDESKPHQQLAPKRTSNKDRHKK 66
           K    P   P  ++ P P   D     IKDF I+IA KDE K  +QLAPKR+S KDRH K
Sbjct: 4   KGSKQPQEVPKFLSLPQPEMGDNKPAEIKDFQIVIAEKDEGK--KQLAPKRSSTKDRHTK 63

Query: 67  VDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALH 126
           VDGRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL 
Sbjct: 64  VDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALA 123

Query: 127 AAGVSVSDQETSISAALTPKLDGV-------ARPNWAMMGANLNRSHMATAGFWPSLGGI 186
           AAG SVS Q TS+SA    K+D +       +R NW+++G NL RSH+AT G WPS+ G 
Sbjct: 124 AAGGSVSQQGTSVSAGFQSKIDELGPGIGSGSRTNWSVIGNNLGRSHVAT-GLWPSVSGF 183

Query: 187 GTGFVSEN----------SGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLEL 246
           G GFV  +          S + M + GFHGFE  G NLG M+F +I+G  +QQ +PGLEL
Sbjct: 184 GPGFVHSSAPSTSNLGTESSNYMTRIGFHGFELPGSNLGPMSFSSIMGGNNQQ-LPGLEL 243

Query: 247 GLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277
           GLSQ+G+   G+LNP + SQ Y Q+ Q R ++ G   +Q Q P KDDS+ SR
Sbjct: 244 GLSQDGH--IGVLNPQALSQFYQQMGQGRGTT-GPMQQQQQPPAKDDSQGSR 288

[Close]
BLAST of CmaCh08G000050 vs. NCBI nr
Match: gi|1009129337|ref|XP_015881712.1| (PREDICTED: transcription factor TCP20-like [Ziziphus jujuba])

HSP 1 Score: 276.2 bits (705), Expect = 6.3e-71
Identity = 165/290 (56.90%), Postives = 202/290 (69.66%), Query Frame = 1 

Query: 12  PASTPTTITPPPPAS------ADIKDFNIIIASKDESKPHQQLAPKRTSNKDRHKKVDGR 71
           P   PT +   P A       A+IKDF I+IA+K+++K  +QLAPKR SNKDRHKKVDGR
Sbjct: 10  PQEVPTLLGHSPKADMAENKPAEIKDFQIMIANKEDNK--KQLAPKRNSNKDRHKKVDGR 69

Query: 72  GRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGV 131
           GRRIRMPALCAARVFQLTRELGHK+DGETIQWLLQQAEPSIIAATG+GTIPASAL   G 
Sbjct: 70  GRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALALTGS 129

Query: 132 SVSDQETSISAALTPKLD--------GVARPNWAMMGANLNRSHMATAGFWPSLGGIGTG 191
           SVS+Q  S+S+AL  K++         V R NWA M  NL RS + + G WPSL G+G+G
Sbjct: 130 SVSEQGNSVSSALHTKMEELGPGGIGSVGRANWAFMSGNLGRSQLPS-GVWPSLSGVGSG 189

Query: 192 FV-----------SENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL 251
           F+           SEN  +++PKFGFHGF+F GMNLGSM+FPTI+   +QQ VPGLELGL
Sbjct: 190 FIQNPGQSTSNFASENL-NMLPKFGFHGFDFPGMNLGSMSFPTILSGNNQQ-VPGLELGL 249

Query: 252 SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277
           SQ+G+    ++N  + SQ+  Q+         G   Q ++PEKDDS+ SR
Sbjct: 250 SQDGH--FRVINSEALSQLQQQM---------GQRPQQESPEKDDSQGSR 283

The following BLAST results are available for this feature:
BLAST of CmaCh08G000050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP20_ARATH3.4e-5649.68Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1[more]
TCP15_ARATH1.9e-2755.64Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1[more]
TCP14_ARATH1.6e-2642.36Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1[more]
TCP8_ARATH2.8e-2671.76Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1[more]
TCP19_ARATH1.1e-2575.00Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1[more]
BLAST of CmaCh08G000050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC88_CUCSA1.2e-11176.76Uncharacterized protein OS=Cucumis sativus GN=Csa_6G093640 PE=4 SV=1[more]
W9R7U5_9ROSA1.5e-7158.96Uncharacterized protein OS=Morus notabilis GN=L484_017473 PE=4 SV=1[more]
B9RMA7_RICCO1.3e-7059.12Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1[more]
A0A061E406_THECC2.2e-7056.31Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1[more]
A0A067K4V4_JATCU4.9e-7057.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1[more]
BLAST of CmaCh08G000050 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27010.11.9e-5749.68 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20[more]
AT1G69690.11.1e-2855.64 TCP family transcription factor [more]
AT3G47620.19.2e-2842.36 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14[more]
AT1G58100.11.6e-2771.76 TCP family transcription factor [more]
AT5G51910.16.0e-2775.00 TCP family transcription factor [more]
BLAST of CmaCh08G000050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119854|ref|XP_008459878.1|2.5e-11277.46PREDICTED: transcription factor TCP20-like [Cucumis melo][more]
gi|778711824|ref|XP_011656799.1|1.7e-11176.76PREDICTED: transcription factor TCP20-like [Cucumis sativus][more]
gi|703077735|ref|XP_010090667.1|2.2e-7158.96hypothetical protein L484_017473 [Morus notabilis][more]
gi|719978206|ref|XP_010249094.1|6.3e-7156.85PREDICTED: transcription factor TCP20-like [Nelumbo nucifera][more]
gi|1009129337|ref|XP_015881712.1|6.3e-7156.90PREDICTED: transcription factor TCP20-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0065007 biological regulation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G000050.1CmaCh08G000050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 53..146
score: 1.4
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 55..109
score: 27
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 27..139
score: 8.0E-71coord: 244..256
score: 8.0
NoneNo IPR availablePANTHERPTHR31072:SF4TRANSCRIPTION FACTOR TCP20-RELATEDcoord: 27..139
score: 8.0E-71coord: 244..256
score: 8.0