Carg03826 (gene) Silver-seed gourd

Overview
NameCarg03826
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription factor TCP20-like
LocationCucurbita_argyrosperma_scaffold_011 : 219249 .. 220916 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCACAACAAGAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCAGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGATTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGGTGATGATTATTGAAGAAGACGACAGGGTTTGGGATTTGTAGGTTTGTGAAAGGAAGGAGACCCCAAAATGAGCACGACCAAGATTAAGGATTGCTTCATATTTGCGGTGTGTTTTTTTTAGTGTTGTTCAAATTCAGGTAATTTTTTCTTTTCTCCTTATTTTATTTTCTTTTGTAATTTTAGTCTTCATAAATTATGGAATTGTTCCTTGTGTTATTTGAACAAAGATTGAGTGAAAATCATTCATAATTGTATTTTTATGAATAACTTTTTCTCTTTTTTTTTGGGTTTTAAAGGGCAAATATACTCTTTGAATTTTTAGAAGAAACAGCAACACCTTGGTTTTAAGATCAAAATGAAAACCCAGAATTTGATGGGTTTATGGATAATCTATTCTTGAGCATAAAAATAAGGTTTGTTTTTTTTTAAAAAAAAAAAAAAAATGGTTTTGATTTTAGGGTTTGATTTGCAACATGCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGACTTTCATTTCTTGAATATTGAGGTGTGTGTTTTGGATATAAATAATTTGTAGGAAAAAAATGATTGTATTATTAGTAATTGTATGAAGCCGATATCAAAATTTGAAGCATGATTGAATTTGATGCATGATAAAGCAAAATACCAATTCCATCCATCTCTATAATTCTTTAATGATTTCACCAATAAGCCACACACATACCTATGATTACAAATTTAATTTTTGTAAATAATTCTTTAATGATTTCACCAATAAGCCACACACATACCTATGATTACAAATTTAATTTTTGTAAATAATTCTTTAATGATTTCACCA

mRNA sequence

ATGGCAGAGCACAACAAGAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCAGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGATTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGTGTTGTTCAAATTCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGACTTTCATTTCTTGAATATTGAGGTGTGTGTTTTGGATATAAATAATTTGTAGGAAAAAAATGATTGTATTATTAGTAATTGTATGAAGCCGATATCAAAATTTGAAGCATGATTGAATTTGATGCATGATAAAGCAAAATACCAATTCCATCCATCTCTATAATTCTTTAATGATTTCACCAATAAGCCACACACATACCTATGATTACAAATTTAATTTTTGTAAATAATTCTTTAATGATTTCACCAATAAGCCACACACATACCTATGATTACAAATTTAATTTTTGTAAATAATTCTTTAATGATTTCACCA

Coding sequence (CDS)

ATGGCAGAGCACAACAAGAAGAAGCCATCACCACCAGCATCAACTCCAACAACAATAACTCCACCACCACCACCATCAGCAGATATCAAAGACTTCAATATCATAATTGCATCCAAAGATGAAAACAAACACCACCAACAATTGGCTCCTAAACGCACCTCCAACAAAGATCGTCACAAGAAAGTCGATGGCCGTGGCCGCAGGATCCGCATGCCTGCCCTCTGCGCCGCCCGCGTCTTTCAATTGACTCGCGAATTAGGCCATAAAACCGATGGGGAGACCATTCAGTGGCTTCTACAGCAGGCCGAGCCGTCCATCATCGCCGCTACTGGCTCCGGTACTATCCCGGCCTCCGCCCTCCACGCTGCTGGCGTCTCCGTCTCCGACCAAGAAACCTCCATCTCCGCTGCCCTAACCCCCAAACTCGATGGCGTCGCCAGGCCGAATTGGGCGATGATGGGAGCTAATTTGAACAGATCTCACATGGCGACGGCAGGATTCTGGCCTTCTCTGGGAGGGATCGGGACGGGTTTCGTGAGCGAGAATTCGGGTTCGATTATGCCGAAATTCGGATTCCATGGATTCGAATTTCAGGGGATGAATTTGGGATCGATGAATTTCCCGACGATAATCGGGAATCAGCATCAGCAGCATGTACCGGGGCTGGAGCTTGGGCTTTCGCAGGAGGGAAATAATCTGAGAGGGATGTTGAATCCGCCATCGTATTCGCAAATTTATCACCAAATAGAGCAAAATCGGGACTCCTCTGGGGGCGGCTCATTGGAGCAGGACCAAGCTCCTGAAAAAGACGATTCTGAACAATCGAGTGTTGTTCAAATTCAGGTGAAGTTTGAGGAGAAGAGTGGTTTGGTTGCAAGATTGCTTTGA

Protein sequence

MAEHNKKKPSPPASTPTTITPPPPPSADIKDFNIIIASKDENKHHQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSSVVQIQVKFEEKSGLVARLL
Homology
[Close]
BLAST of Carg03826 vs. NCBI nr
Match: XP_022959998.1 (transcription factor TCP20-like [Cucurbita moschata])

HSP 1 Score: 456.1 bits (1172), Expect = 9.3e-125
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI
Sbjct: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106

Query: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG 166
           IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG
Sbjct: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG 166

Query: 167 FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL 226
           FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL
Sbjct: 167 FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL 226

Query: 227 SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS
Sbjct: 227 SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 275

[Close]
BLAST of Carg03826 vs. NCBI nr
Match: XP_023004307.1 (transcription factor TCP20-like [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 9.3e-125
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI
Sbjct: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106

Query: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG 166
           IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG
Sbjct: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAG 166

Query: 167 FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL 226
           FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL
Sbjct: 167 FWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGL 226

Query: 227 SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS
Sbjct: 227 SQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 275

[Close]
BLAST of Carg03826 vs. NCBI nr
Match: XP_023513595.1 (transcription factor TCP20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.1 bits (1167), Expect = 3.5e-124
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 

Query: 48  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 107
           LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII
Sbjct: 49  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 108

Query: 108 AATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGF 167
           AATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGF
Sbjct: 109 AATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLNRSHMATAGF 168

Query: 168 WPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLS 227
           WPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLS
Sbjct: 169 WPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLS 228

Query: 228 QEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           QEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS
Sbjct: 229 QEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276

[Close]
BLAST of Carg03826 vs. NCBI nr
Match: XP_008459878.1 (PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDICTED: transcription factor TCP20-like [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 8.2e-105
Identity = 199/230 (86.52%), Postives = 215/230 (93.48%), Query Frame = 0 

Query: 48  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 107
           LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII
Sbjct: 66  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 125

Query: 108 AATGSGTIPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATA 167
           AATGSGTIPASALHAAGVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMAT 
Sbjct: 126 AATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATP 185

Query: 168 GFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELG 227
           GFWPSLGGIGTGFVSEN GSIMPKFGFHGFEFQGMNLGS+NFP +IGNQHQQ +PGLELG
Sbjct: 186 GFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQ-IPGLELG 245

Query: 228 LSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           LSQ+GNNLRGMLNPPS+SQIYHQI QNR+SS    LEQDQAPEKDDS++S
Sbjct: 246 LSQDGNNLRGMLNPPSFSQIYHQIGQNRESS-APPLEQDQAPEKDDSQES 293

[Close]
BLAST of Carg03826 vs. NCBI nr
Match: XP_011656799.1 (PREDICTED: transcription factor TCP20-like [Cucumis sativus] >KGN46444.1 hypothetical protein Csa_6G093640 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 6.9e-104
Identity = 197/230 (85.65%), Postives = 213/230 (92.61%), Query Frame = 0 

Query: 48  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 107
           LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII
Sbjct: 64  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 123

Query: 108 AATGSGTIPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATA 167
           AATGSGTIPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ 
Sbjct: 124 AATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQ 183

Query: 168 GFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELG 227
           GFWPSLGGIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELG
Sbjct: 184 GFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELG 243

Query: 228 LSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           LSQ+GNNLRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++S
Sbjct: 244 LSQDGNNLRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQES 291

[Close]
BLAST of Carg03826 vs. TAIR10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47
Identity = 115/225 (51.11%), Postives = 136/225 (60.44%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QL PKR+SNKDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSI
Sbjct: 70  QLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSI 129

Query: 107 IAATGSGTIPASAL--------HAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLN 166
           IAATGSGTIPASAL        H  G                                  
Sbjct: 130 IAATGSGTIPASALASSAATSNHHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189

Query: 167 RSHMATAGFWPSLGGIG-----TGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGN 226
                    WP++ G G     TG +SE +G    + GF GF+F G  +G M+F +I+G 
Sbjct: 190 XXXXXXXXLWPNVAGFGSGVPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGG 249

Query: 227 QHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGG 259
            H Q +PGLELGLSQEGN   G+LNP S++QIY Q+ Q +  + G
Sbjct: 250 NHNQ-MPGLELGLSQEGN--VGVLNPQSFTQIYQQMGQAQAQAQG 286

[Close]
BLAST of Carg03826 vs. TAIR10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 0 

Query: 51  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 110
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 111 GSGTIPAS------ALHAAGVSVSDQETSISAALTPKLDGVARP 149
           G+GTIPA+      +L ++G S+S      SAA T   + +  P
Sbjct: 173 GTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSP 216

[Close]
BLAST of Carg03826 vs. TAIR10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 56  KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTI 115
           KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+GTI
Sbjct: 53  KDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTI 112

Query: 116 PASALHAAGVSVSDQETSISAA 138
           PA+   +  +S+    +S+SAA
Sbjct: 113 PAN-FTSLNISLRSSRSSLSAA 133

[Close]
BLAST of Carg03826 vs. TAIR10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-27
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 0 

Query: 56  KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTI 115
           KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEP+I+AATG+GTI
Sbjct: 61  KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTI 120

Query: 116 PASALHAAGVSVSDQETSISA 137
           PA+      VS+    +++SA
Sbjct: 121 PAN-FSTLSVSLRSSGSTLSA 140

[Close]
BLAST of Carg03826 vs. TAIR10
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-27
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 51  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 110
           KR S KDRH KV+GRGRRIRMPA CAAR+FQLTRELGHK+DGETI+WLL+ AEP+IIAAT
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 111 GSGTIPASALHAAG 125
           G+GT+PA A+   G
Sbjct: 131 GTGTVPAIAMSVNG 144

[Close]
BLAST of Carg03826 vs. Swiss-Prot
Match: sp|Q9LSD5|TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-46
Identity = 115/225 (51.11%), Postives = 136/225 (60.44%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QL PKR+SNKDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETIQWLLQQAEPSI
Sbjct: 70  QLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSI 129

Query: 107 IAATGSGTIPASAL--------HAAGVSVSDQETSISAALTPKLDGVARPNWAMMGANLN 166
           IAATGSGTIPASAL        H  G                                  
Sbjct: 130 IAATGSGTIPASALASSAATSNHHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189

Query: 167 RSHMATAGFWPSLGGIG-----TGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGN 226
                    WP++ G G     TG +SE +G    + GF GF+F G  +G M+F +I+G 
Sbjct: 190 XXXXXXXXLWPNVAGFGSGVPTTGLMSEGAGY---RIGFPGFDFPG--VGHMSFASILGG 249

Query: 227 QHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGG 259
            H Q +PGLELGLSQEGN   G+LNP S++QIY Q+ Q +  + G
Sbjct: 250 NHNQ-MPGLELGLSQEGN--VGVLNPQSFTQIYQQMGQAQAQAQG 286

[Close]
BLAST of Carg03826 vs. Swiss-Prot
Match: sp|Q93Z00|TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-28
Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 0 

Query: 51  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 110
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 111 GSGTIPAS------ALHAAGVSVSDQETSISAALTPKLDGVARP 149
           G+GTIPA+      +L ++G S+S      SAA T   + +  P
Sbjct: 173 GTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSP 216

[Close]
BLAST of Carg03826 vs. Swiss-Prot
Match: sp|Q9C9L2|TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0 

Query: 56  KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTI 115
           KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+GTI
Sbjct: 53  KDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTI 112

Query: 116 PASALHAAGVSVSDQETSISAA 138
           PA+   +  +S+    +S+SAA
Sbjct: 113 PAN-FTSLNISLRSSRSSLSAA 133

[Close]
BLAST of Carg03826 vs. Swiss-Prot
Match: sp|Q53PH2|PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-26
Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 56  KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTI 115
           KDRH KV+GRGRRIRMPALCAARVFQLTRELGHKTDGETI+WLLQQAEP+I+AATG+GTI
Sbjct: 153 KDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTI 212

Query: 116 PAS 119
           PA+
Sbjct: 213 PAN 215

[Close]
BLAST of Carg03826 vs. Swiss-Prot
Match: sp|Q9C518|TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-26
Identity = 60/81 (74.07%), Postives = 70/81 (86.42%), Query Frame = 0 

Query: 56  KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTI 115
           KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEP+I+AATG+GTI
Sbjct: 61  KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTI 120

Query: 116 PASALHAAGVSVSDQETSISA 137
           PA+      VS+    +++SA
Sbjct: 121 PAN-FSTLSVSLRSSGSTLSA 140

[Close]
BLAST of Carg03826 vs. TrEMBL
Match: tr|A0A1S3CAQ4|A0A1S3CAQ4_CUCME (transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 5.4e-105
Identity = 199/230 (86.52%), Postives = 215/230 (93.48%), Query Frame = 0 

Query: 48  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 107
           LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII
Sbjct: 66  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 125

Query: 108 AATGSGTIPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATA 167
           AATGSGTIPASALHAAGVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMAT 
Sbjct: 126 AATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMATP 185

Query: 168 GFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELG 227
           GFWPSLGGIGTGFVSEN GSIMPKFGFHGFEFQGMNLGS+NFP +IGNQHQQ +PGLELG
Sbjct: 186 GFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQ-IPGLELG 245

Query: 228 LSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           LSQ+GNNLRGMLNPPS+SQIYHQI QNR+SS    LEQDQAPEKDDS++S
Sbjct: 246 LSQDGNNLRGMLNPPSFSQIYHQIGQNRESS-APPLEQDQAPEKDDSQES 293

[Close]
BLAST of Carg03826 vs. TrEMBL
Match: tr|A0A0A0KC88|A0A0A0KC88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 4.6e-104
Identity = 197/230 (85.65%), Postives = 213/230 (92.61%), Query Frame = 0 

Query: 48  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 107
           LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII
Sbjct: 64  LAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSII 123

Query: 108 AATGSGTIPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATA 167
           AATGSGTIPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ 
Sbjct: 124 AATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQ 183

Query: 168 GFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELG 227
           GFWPSLGGIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELG
Sbjct: 184 GFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELG 243

Query: 228 LSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQS 276
           LSQ+GNNLRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++S
Sbjct: 244 LSQDGNNLRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQES 291

[Close]
BLAST of Carg03826 vs. TrEMBL
Match: tr|A0A2P4NAU9|A0A2P4NAU9_QUESU (Transcription factor tcp20 OS=Quercus suber OX=58331 GN=CFP56_37674 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.4e-70
Identity = 157/249 (63.05%), Postives = 180/249 (72.29%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QLAPKR+S KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHK+DGETIQWLLQQAEPSI
Sbjct: 25  QLAPKRSSTKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSI 84

Query: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGV--------ARPNWAMMGANLN 166
           IAATGSGTIPASAL AAG SVS+Q  S+S  L  K++ +         R NW MM  NL 
Sbjct: 85  IAATGSGTIPASALAAAGSSVSEQGNSVSTGLHTKMESLGGSGIGSGGRVNWTMMSGNLG 144

Query: 167 RSHMATAGFWPSLGGIGTGFV-----------SENSGSIMPKFGFHGFEFQGMNLGSMNF 226
           R H++T G WPS+ GIGTGFV           SENS + +PKFGFHGFEF  MNLG MN 
Sbjct: 145 RPHVST-GMWPSISGIGTGFVHNPNQTSLNFGSENS-NFLPKFGFHGFEFPNMNLGPMNL 204

Query: 227 PTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAP 276
             I+   ++Q VPGLELGLSQEG+   GM+NP + SQ Y  + Q+R  +   SL Q Q P
Sbjct: 205 SAIMSGTNRQVVPGLELGLSQEGH--IGMINPQALSQFYQHMGQSRGDA--DSLNQQQEP 264

[Close]
BLAST of Carg03826 vs. TrEMBL
Match: tr|A0A2I4FYE8|A0A2I4FYE8_9ROSI (transcription factor TCP20-like OS=Juglans regia OX=51240 GN=LOC109003134 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.1e-68
Identity = 155/246 (63.01%), Postives = 179/246 (72.76%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QLAPKR+S KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHK+DGETIQWLLQQAEPSI
Sbjct: 10  QLAPKRSSTKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSI 69

Query: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGV-------ARPNWAMMGANLNR 166
           IAATGSGTIPASAL  AG SVS+Q  S S  L  K++G+        R NW MM  NL R
Sbjct: 70  IAATGSGTIPASALSVAGASVSEQGNSASTGLHTKMEGLGPGMGSGGRTNWTMMSGNLGR 129

Query: 167 SHMATAGFWPSLGGIGTGFVSENSGSI---------MPKFGFHGFEFQGMNLGSMNFPTI 226
           +H A +G WPS+ GIG+GFV  +S S+         +PKFGF GFEF  MNLG M+F TI
Sbjct: 130 AH-APSGMWPSISGIGSGFVHNSSQSLNLGSENSNFLPKFGFPGFEFPNMNLGPMSFSTI 189

Query: 227 IGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAP-EK 276
           +   ++Q +PGLELGLSQ+G+   GMLN  + SQ Y QI Q+R  +  GSL Q Q P +K
Sbjct: 190 MSGANRQ-IPGLELGLSQDGH--IGMLNSQALSQFYRQIGQSRGDA--GSLNQHQEPSDK 249

[Close]
BLAST of Carg03826 vs. TrEMBL
Match: tr|A0A2P4NAS7|A0A2P4NAS7_QUESU (Transcription factor tcp20 OS=Quercus suber OX=58331 GN=CFP56_37674 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 146/226 (64.60%), Postives = 166/226 (73.45%), Query Frame = 0 

Query: 47  QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSI 106
           QLAPKR+S KDRHKKVDGRGRRIRMPALCAARVFQLTRELGHK+DGETIQWLLQQAEPSI
Sbjct: 25  QLAPKRSSTKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQAEPSI 84

Query: 107 IAATGSGTIPASALHAAGVSVSDQETSISAALTPKLDGV--------ARPNWAMMGANLN 166
           IAATGSGTIPASAL AAG SVS+Q  S+S  L  K++ +         R NW MM  NL 
Sbjct: 85  IAATGSGTIPASALAAAGSSVSEQGNSVSTGLHTKMESLGGSGIGSGGRVNWTMMSGNLG 144

Query: 167 RSHMATAGFWPSLGGIGTGFV-----------SENSGSIMPKFGFHGFEFQGMNLGSMNF 226
           R H++T G WPS+ GIGTGFV           SENS + +PKFGFHGFEF  MNLG MN 
Sbjct: 145 RPHVST-GMWPSISGIGTGFVHNPNQTSLNFGSENS-NFLPKFGFHGFEFPNMNLGPMNL 204

Query: 227 PTIIGNQHQQHVPGLELGLSQEGNNLRGMLNPPSYSQIYHQIEQNR 254
             I+   ++Q VPGLELGLSQEG+   GM+NP + SQ Y  + Q+R
Sbjct: 205 SAIMSGTNRQVVPGLELGLSQEGH--IGMINPQALSQFYQHMGQSR 246

The following BLAST results are available for this feature:
BLAST of Carg03826 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959998.19.3e-125100.00transcription factor TCP20-like [Cucurbita moschata][more]
XP_023004307.19.3e-125100.00transcription factor TCP20-like [Cucurbita maxima][more]
XP_023513595.13.5e-124100.00transcription factor TCP20-like [Cucurbita pepo subsp. pepo][more]
XP_008459878.18.2e-10586.52PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDIC... [more]
XP_011656799.16.9e-10485.65PREDICTED: transcription factor TCP20-like [Cucumis sativus] >KGN46444.1 hypothe... [more]
BLAST of Carg03826 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27010.11.1e-4751.11TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20[more]
AT3G47620.12.3e-2966.35TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14[more]
AT1G69690.12.2e-2771.95TCP family transcription factor [more]
AT1G58100.12.9e-2774.07TCP family transcription factor [more]
AT2G45680.14.9e-2775.68TCP family transcription factor [more]
BLAST of Carg03826 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LSD5|TCP20_ARATH2.0e-4651.11Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1[more]
sp|Q93Z00|TCP14_ARATH4.2e-2866.35Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1[more]
sp|Q9C9L2|TCP15_ARATH4.0e-2671.95Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1[more]
sp|Q53PH2|PCF3_ORYSJ5.2e-2688.89Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ... [more]
sp|Q9C518|TCP8_ARATH5.2e-2674.07Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1[more]
BLAST of Carg03826 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAQ4|A0A1S3CAQ4_CUCME5.4e-10586.52transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=... [more]
tr|A0A0A0KC88|A0A0A0KC88_CUCSA4.6e-10485.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV=1[more]
tr|A0A2P4NAU9|A0A2P4NAU9_QUESU7.4e-7063.05Transcription factor tcp20 OS=Quercus suber OX=58331 GN=CFP56_37674 PE=4 SV=1[more]
tr|A0A2I4FYE8|A0A2I4FYE8_9ROSI3.1e-6863.01transcription factor TCP20-like OS=Juglans regia OX=51240 GN=LOC109003134 PE=4 S... [more]
tr|A0A2P4NAS7|A0A2P4NAS7_QUESU1.5e-6764.60Transcription factor tcp20 OS=Quercus suber OX=58331 GN=CFP56_37674 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017887TF_TCP_subgr
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03826-RACarg03826-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 53..151
e-value: 8.0E-32
score: 110.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..278
NoneNo IPR availablePANTHERPTHR31072:SF4TRANSCRIPTION FACTOR TCP20coord: 26..257
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 26..257
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 55..109
score: 27.381