Csa5G627080 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAACTCATCCTCTTCTACGATAATTTTTTATTCTCAAGTGAAAGATGCATCTTATCATATGATGATACATTCTCCCACAATATATAGAAAAAAATAAAATAAAATCTCAACCTCAGTTAGTGCCATTCCACCATTTGTTAATCTCTCTCTCTCGTCCATTTCTCTATAATTGGATTGGTATTCAACAAACTGTAGCCAATCTCAAATCCCCATTTTCCTTCCCCGCTTCAATTCTCCCCTAAATCGATAATGCTCAATTTCTCCTTCCTGTTCATCCTCAATCCTCCGATTTGCATTTCTTTCTGATATCGGTTTTGGTGGTAATTAATTCATCGGCTGTTCTTCGCAGCAGAGAGAAATAATTCGACCATGGGATTTAGATCTCTGTTCCGAAAAAAGAAACCCTTCTCCTCCGTTAATTCTCCACTCGTTTCCTCATCCTCCACACTCGGATCTCGATCCTCATTAGATGATTCAGAATCTCAGATCACAGAACTCGAGGAAGTATTCAAGAAATTCGATGTGAACGGTGACGGAAAGATCTCCTCTGCTGAATTAGGCTCCATTATGAGAAGCCTAGGGCACAACGCTACAGAGGAAGAGCTCGGGAAGATGATAGACGAATTCGATGCCGATGGCGACGGATTCATCAATTTGCACGAATTTGTGGAATTAAATACTAAAGAAATCGATCCGGAGGAATTGTTGGAGAATCTGAGAGAGGCGTTTTCGGTATATGATATCGATGGAAATGGATCCATCTCTGCTGAGGAATTGCATAAGGTTCTGCAAAGTTTGGGGGACGATTGTTCGGTAGCGGATTGCCGGCAGATGATCAGCGGCGTCGATAGCAACGGCGATGGAATGATTAGCTTTGAGGAGTTCAAGGTGATGATGTCGACGGGACTGTCCGTCGCTGGCAGCTGAGTTTGAACATCCGCTGGTAGATTTCAAGAGGAATTTGCTAGAATTCGGATTTTTTTTTCTTCTTCCGTTCTGTCTCCGACGAAAGTACTGGAAGTTCTTCACCGTTATATATATATATATTATTTGTAGAATTGTAAAAAACATAAAAAAATAATAATAAATATTTATTCTATAAATAATAGACACTTACATGACTAATTGATAGTCAA ATGGGATTTAGATCTCTGTTCCGAAAAAAGAAACCCTTCTCCTCCGTTAATTCTCCACTCGTTTCCTCATCCTCCACACTCGGATCTCGATCCTCATTAGATGATTCAGAATCTCAGATCACAGAACTCGAGGAAGTATTCAAGAAATTCGATGTGAACGGTGACGGAAAGATCTCCTCTGCTGAATTAGGCTCCATTATGAGAAGCCTAGGGCACAACGCTACAGAGGAAGAGCTCGGGAAGATGATAGACGAATTCGATGCCGATGGCGACGGATTCATCAATTTGCACGAATTTGTGGAATTAAATACTAAAGAAATCGATCCGGAGGAATTGTTGGAGAATCTGAGAGAGGCGTTTTCGGTATATGATATCGATGGAAATGGATCCATCTCTGCTGAGGAATTGCATAAGGTTCTGCAAAGTTTGGGGGACGATTGTTCGGTAGCGGATTGCCGGCAGATGATCAGCGGCGTCGATAGCAACGGCGATGGAATGATTAGCTTTGAGGAGTTCAAGGTGATGATGTCGACGGGACTGTCCGTCGCTGGCAGCTGA ATGGGATTTAGATCTCTGTTCCGAAAAAAGAAACCCTTCTCCTCCGTTAATTCTCCACTCGTTTCCTCATCCTCCACACTCGGATCTCGATCCTCATTAGATGATTCAGAATCTCAGATCACAGAACTCGAGGAAGTATTCAAGAAATTCGATGTGAACGGTGACGGAAAGATCTCCTCTGCTGAATTAGGCTCCATTATGAGAAGCCTAGGGCACAACGCTACAGAGGAAGAGCTCGGGAAGATGATAGACGAATTCGATGCCGATGGCGACGGATTCATCAATTTGCACGAATTTGTGGAATTAAATACTAAAGAAATCGATCCGGAGGAATTGTTGGAGAATCTGAGAGAGGCGTTTTCGGTATATGATATCGATGGAAATGGATCCATCTCTGCTGAGGAATTGCATAAGGTTCTGCAAAGTTTGGGGGACGATTGTTCGGTAGCGGATTGCCGGCAGATGATCAGCGGCGTCGATAGCAACGGCGATGGAATGATTAGCTTTGAGGAGTTCAAGGTGATGATGTCGACGGGACTGTCCGTCGCTGGCAGCTGA MGFRSLFRKKKPFSSVNSPLVSSSSTLGSRSSLDDSESQITELEEVFKKFDVNGDGKISSAELGSIMRSLGHNATEEELGKMIDEFDADGDGFINLHEFVELNTKEIDPEELLENLREAFSVYDIDGNGSISAEELHKVLQSLGDDCSVADCRQMISGVDSNGDGMISFEEFKVMMSTGLSVAGS*
BLAST of Csa5G627080 vs. Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.8e-53 Identity = 101/143 (70.63%), Postives = 118/143 (82.52%), Query Frame = 1
BLAST of Csa5G627080 vs. Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-42 Identity = 95/180 (52.78%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of Csa5G627080 vs. Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.8e-36 Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 1
BLAST of Csa5G627080 vs. Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2) HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35 Identity = 78/160 (48.75%), Postives = 109/160 (68.12%), Query Frame = 1
BLAST of Csa5G627080 vs. Swiss-Prot
Match: CML18_ORYSJ (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica GN=CML18 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.1e-34 Identity = 75/152 (49.34%), Postives = 98/152 (64.47%), Query Frame = 1
BLAST of Csa5G627080 vs. TrEMBL
Match: A0A0A0KX11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G627080 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.2e-97 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of Csa5G627080 vs. TrEMBL
Match: A0A059D691_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02672 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 7.4e-62 Identity = 125/180 (69.44%), Postives = 148/180 (82.22%), Query Frame = 1
BLAST of Csa5G627080 vs. TrEMBL
Match: A0A0A0KST2_CUCSA (Polcalcin Jun o OS=Cucumis sativus GN=Csa_5G561760 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61 Identity = 128/181 (70.72%), Postives = 151/181 (83.43%), Query Frame = 1
BLAST of Csa5G627080 vs. TrEMBL
Match: A0A061E9N9_THECC (Polcalcin Jun o, putative OS=Theobroma cacao GN=TCM_011044 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 4.0e-60 Identity = 125/191 (65.45%), Postives = 151/191 (79.06%), Query Frame = 1
BLAST of Csa5G627080 vs. TrEMBL
Match: B9HW20_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s11740g PE=4 SV=2) HSP 1 Score: 238.4 bits (607), Expect = 6.9e-60 Identity = 121/183 (66.12%), Postives = 147/183 (80.33%), Query Frame = 1
BLAST of Csa5G627080 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-54 Identity = 101/143 (70.63%), Postives = 118/143 (82.52%), Query Frame = 1
BLAST of Csa5G627080 vs. TAIR10
Match: AT5G37770.1 (AT5G37770.1 EF hand calcium-binding protein family) HSP 1 Score: 144.1 bits (362), Expect = 8.9e-35 Identity = 72/142 (50.70%), Postives = 102/142 (71.83%), Query Frame = 1
HSP 2 Score: 62.8 bits (151), Expect = 2.6e-10 Identity = 25/68 (36.76%), Postives = 47/68 (69.12%), Query Frame = 1
BLAST of Csa5G627080 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34 Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 1
HSP 2 Score: 44.3 bits (103), Expect = 9.6e-05 Identity = 24/82 (29.27%), Postives = 41/82 (50.00%), Query Frame = 1
BLAST of Csa5G627080 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23) HSP 1 Score: 141.0 bits (354), Expect = 7.6e-34 Identity = 72/150 (48.00%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of Csa5G627080 vs. TAIR10
Match: AT1G18210.1 (AT1G18210.1 Calcium-binding EF-hand family protein) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32 Identity = 69/137 (50.36%), Postives = 92/137 (67.15%), Query Frame = 1
HSP 2 Score: 54.7 bits (130), Expect = 7.1e-08 Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 1
BLAST of Csa5G627080 vs. NCBI nr
Match: gi|449449242|ref|XP_004142374.1| (PREDICTED: probable calcium-binding protein CML25 [Cucumis sativus]) HSP 1 Score: 362.5 bits (929), Expect = 4.5e-97 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1
BLAST of Csa5G627080 vs. NCBI nr
Match: gi|659129528|ref|XP_008464718.1| (PREDICTED: probable calcium-binding protein CML25 [Cucumis melo]) HSP 1 Score: 350.9 bits (899), Expect = 1.4e-93 Identity = 179/184 (97.28%), Postives = 181/184 (98.37%), Query Frame = 1
BLAST of Csa5G627080 vs. NCBI nr
Match: gi|702273734|ref|XP_010043960.1| (PREDICTED: probable calcium-binding protein CML25 [Eucalyptus grandis]) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 125/180 (69.44%), Postives = 148/180 (82.22%), Query Frame = 1
BLAST of Csa5G627080 vs. NCBI nr
Match: gi|778703916|ref|XP_011655449.1| (PREDICTED: probable calcium-binding protein CML25 [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 3.1e-61 Identity = 128/181 (70.72%), Postives = 151/181 (83.43%), Query Frame = 1
BLAST of Csa5G627080 vs. NCBI nr
Match: gi|743822788|ref|XP_011021780.1| (PREDICTED: probable calcium-binding protein CML25 [Populus euphratica]) HSP 1 Score: 242.7 bits (618), Expect = 5.2e-61 Identity = 124/183 (67.76%), Postives = 148/183 (80.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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