Csa5G077760 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G077760
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr5 : 2349459 .. 2350273 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGCAACGGTCATAAGATTTGAAATAAAGCAATGAATGAATGGAATTCATTCTCCCAGTTTGATGTTCTTCTTCCACCACAGATTCAAAACCCCACCATAATGCTTAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACGAAACCCAAACAAATTCCTACCAGTACTGCTGCATTTGCCATTGCTCCTCCTCAACCCATCAGCATAACCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCTATGGCTCAACGATGCTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCTGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCCATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGTTGATTAAGTTATTTGAGTGCCTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACGTACCATAGTAATTTCTACTAATGTGTTTTGTTTGTTTGTGATTTTTATATTTAGAGGTGAACTTCTGGATTCCATGAAGTTACCGAAACAAACTACAAATATACACACAAGTATGAACGATTCTTTTGTGGGTGAGAGAGTCGGTTTACATTTCACGTTTGTAGAAAAGATATTGAAGAAATCCAAACAAGAAGTATTTTTAAATTTGTTATATGAACACTATTCATTAGGCAATCCAAACAAGAATAAAGGATACAACTCCTTTTGATTTCCCCCC

mRNA sequence

ATGAATGAATGGAATTCATTCTCCCAGTTTGATGTTCTTCTTCCACCACAGATTCAAAACCCCACCATAATGCTTAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACGAAACCCAAACAAATTCCTACCAGTACTGCTGCATTTGCCATTGCTCCTCCTCAACCCATCAGCATAACCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCTATGGCTCAACGATGCTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCTGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCCATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGTTGATTAAGTTATTTGAGTGCCTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACGTACCATAG

Coding sequence (CDS)

ATGAATGAATGGAATTCATTCTCCCAGTTTGATGTTCTTCTTCCACCACAGATTCAAAACCCCACCATAATGCTTAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAAACCAAACGAAACCCAAACAAATTCCTACCAGTACTGCTGCATTTGCCATTGCTCCTCCTCAACCCATCAGCATAACCAGCAGCAGCCCTCAGCTCCCCCACTTCCGCTATGGCTCAACGATGCTCCCACCTTTCTGCCGCCTTCAACGCAATCGCAATTTGAACATCCAGACACAGCTGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAATACTTGGTGGCAGAGCCGGTTTACGGGGTGCCCATCATCGTGGAAACTGAAAGTGGAAGAGGTCAGAAATGGAAAAGGTTGATTAAGTTATTTGAGTGCCTCTGCCCCTGTTTTGGTATTACACAACAACTTTACTACGTACCATAG

Protein sequence

MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP*
Homology
[Close]
BLAST of Csa5G077760 vs. TrEMBL
Match: A0A0A0KJG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 5.3e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC 60
           MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC
Sbjct: 1   MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC 60

Query: 61  ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY 120
           ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY
Sbjct: 61  ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY 120

Query: 121 QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP 171
           QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP
Sbjct: 121 QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP 170

[Close]
BLAST of Csa5G077760 vs. TrEMBL
Match: B9SPB8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0496640 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.4e-11
Identity = 61/171 (35.67%), Postives = 76/171 (44.44%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYC----CICHCSSSTHQHNQQQPSAP 83
           M+KA KK L+ LW + KK+ K      T    Y +     C C CS ST      QPSAP
Sbjct: 1   MIKAAKK-LRKLWPRKKKRKK------TYQEPYYFLPPPSCHCCCSYST----PVQPSAP 60

Query: 84  PLPLWLNDAPTFLPPST-----------QSQFEHP------DTADEMVEPLVANQ---WS 143
           PLP WL  A T    S+           QSQF+ P      +T    + P + N     +
Sbjct: 61  PLPPWLESAQTHEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLT 120

Query: 144 YQQYLVAEPVYGVPIIVETESGR------GQKWKRLIKLFECLCPCFGITQ 165
           YQQY V  PVYGVP++ +T          G   K    L  C CPCF I +
Sbjct: 121 YQQYAVPNPVYGVPVVEQTPRRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

[Close]
BLAST of Csa5G077760 vs. TrEMBL
Match: A0A0D2TNG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G114500 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-11
Identity = 60/166 (36.14%), Postives = 78/166 (46.99%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQ-----QPSA 83
           M KA KK LK  WS+ K+K K   P  +        C CHCS ST  H  Q     QPSA
Sbjct: 1   MFKAVKK-LK-FWSRKKRKRKSLAPQPSH-------CFCHCSHSTSSHYYQCNYPLQPSA 60

Query: 84  PPLPLWLNDAPT---FLPPSTQS-----QFEHPDTADEMVE--PLV--ANQWSYQQYLVA 143
           PPLP W     T   FL           +F HP    + +E  P++  A   SYQQY+V+
Sbjct: 61  PPLPPWFQAELTQDEFLTSEQAEAEPFPEFSHPTDLVQDIESDPMIPAAAFPSYQQYMVS 120

Query: 144 EPVYGVPIIVETESGRGQKWKRL--------IKLFECLCPCFGITQ 165
            PVYG P++ +T  GR ++            ++L  C CPC  I +
Sbjct: 121 NPVYG-PVVQQT--GRRERSGGYFGCIIDIGLRLIRCFCPCVHIRE 154

[Close]
BLAST of Csa5G077760 vs. TrEMBL
Match: B9N785_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s00910g PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 54/159 (33.96%), Postives = 71/159 (44.65%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPL 83
           M+KA KK LK  W + KK+ K  + +E   +     C C CS  T      QPSAPPLP 
Sbjct: 1   MIKAAKK-LKKFWPRKKKRKKTLQYHEPYYHHPPSSCHCCCSYPTAP---TQPSAPPLPP 60

Query: 84  WLNDAPTFLPPSTQSQFEHPDTA---------DEMV---EPLVANQWSYQQYLVAEPVYG 143
           WL    T+   S       P+ A          E+V    P+     SYQQYLV  PVYG
Sbjct: 61  WLEPELTYEAVSAPGLLSLPELAHPSHIQVPSQEIVMETTPIYPTLPSYQQYLVPNPVYG 120

Query: 144 VPIIVETESGRGQKWKRLI-----KLFECLCPCFGITQQ 166
           VP+  +    +   +   +      L  C CPCF I ++
Sbjct: 121 VPVEQKPRREKSTGFFGCVVTFCANLIRCFCPCFRIQEK 155

[Close]
BLAST of Csa5G077760 vs. TrEMBL
Match: I1LT89_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G164000 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10
Identity = 60/150 (40.00%), Postives = 74/150 (49.33%), Query Frame = 1 

Query: 30  KKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLP------L 89
           KKLK LWSK K+K K         +   YCC C+CSSS       QPSAPPLP       
Sbjct: 9   KKLK-LWSKKKRKKK----THGHEHPPHYCCSCYCSSSI------QPSAPPLPSSSCLDF 68

Query: 90  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYL--VAEPVYGVPIIV----E 149
             ++  TFLP  T      P+   + +  L +   SYQQY+  V+EPVYG+P+ V     
Sbjct: 69  EYSNYGTFLP--TPEPEPEPEPQPQEIASLNS---SYQQYMVSVSEPVYGIPVPVIHASR 128

Query: 150 TESGRGQ---KWKRLIKLFECLCPCFGITQ 165
           TE   GQ    +     LF CL PCF I Q
Sbjct: 129 TERSAGQFGCLFSFGSYLFRCLFPCFYIRQ 142

[Close]
BLAST of Csa5G077760 vs. NCBI nr
Match: gi|700194531|gb|KGN49708.1| (hypothetical protein Csa_5G077760 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 7.6e-99
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

Query: 1   MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC 60
           MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC
Sbjct: 1   MNEWNSFSQFDVLLPPQIQNPTIMLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCC 60

Query: 61  ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY 120
           ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY
Sbjct: 61  ICHCSSSTHQHNQQQPSAPPLPLWLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSY 120

Query: 121 QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP 171
           QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP
Sbjct: 121 QQYLVAEPVYGVPIIVETESGRGQKWKRLIKLFECLCPCFGITQQLYYVP 170

[Close]
BLAST of Csa5G077760 vs. NCBI nr
Match: gi|659121311|ref|XP_008460596.1| (PREDICTED: uncharacterized protein LOC103499377 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 118/147 (80.27%), Postives = 125/147 (85.03%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPL 83
           MLKATKKKLKGLWSKMKKK    KPN+TQTN YQYCC CHCSSS+H H+Q  PSAPPLP 
Sbjct: 1   MLKATKKKLKGLWSKMKKK----KPNKTQTNCYQYCCSCHCSSSSHLHHQ--PSAPPLPP 60

Query: 84  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGRG 143
           WLN+ PTFLPP TQSQFEHPD AD M    V NQWSYQQYLVAEPVYGVPIIV+TES R 
Sbjct: 61  WLNEDPTFLPPPTQSQFEHPDRADGM----VTNQWSYQQYLVAEPVYGVPIIVKTESRRD 120

Query: 144 QKWKRLIKLFECLCPCFGITQQLYYVP 171
           QKWKRLIKLF+C CPCFGITQQLYY+P
Sbjct: 121 QKWKRLIKLFDCFCPCFGITQQLYYIP 137

[Close]
BLAST of Csa5G077760 vs. NCBI nr
Match: gi|255573836|ref|XP_002527837.1| (PREDICTED: uncharacterized protein LOC8262569 [Ricinus communis])

HSP 1 Score: 75.9 bits (185), Expect = 7.8e-11
Identity = 61/171 (35.67%), Postives = 76/171 (44.44%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYC----CICHCSSSTHQHNQQQPSAP 83
           M+KA KK L+ LW + KK+ K      T    Y +     C C CS ST      QPSAP
Sbjct: 1   MIKAAKK-LRKLWPRKKKRKK------TYQEPYYFLPPPSCHCCCSYST----PVQPSAP 60

Query: 84  PLPLWLNDAPTFLPPST-----------QSQFEHP------DTADEMVEPLVANQ---WS 143
           PLP WL  A T    S+           QSQF+ P      +T    + P + N     +
Sbjct: 61  PLPPWLESAQTHEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLT 120

Query: 144 YQQYLVAEPVYGVPIIVETESGR------GQKWKRLIKLFECLCPCFGITQ 165
           YQQY V  PVYGVP++ +T          G   K    L  C CPCF I +
Sbjct: 121 YQQYAVPNPVYGVPVVEQTPRRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

[Close]
BLAST of Csa5G077760 vs. NCBI nr
Match: gi|823224874|ref|XP_012445219.1| (PREDICTED: uncharacterized protein LOC105769255 [Gossypium raimondii])

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 60/166 (36.14%), Postives = 78/166 (46.99%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQ-----QPSA 83
           M KA KK LK  WS+ K+K K   P  +        C CHCS ST  H  Q     QPSA
Sbjct: 1   MFKAVKK-LK-FWSRKKRKRKSLAPQPSH-------CFCHCSHSTSSHYYQCNYPLQPSA 60

Query: 84  PPLPLWLNDAPT---FLPPSTQS-----QFEHPDTADEMVE--PLV--ANQWSYQQYLVA 143
           PPLP W     T   FL           +F HP    + +E  P++  A   SYQQY+V+
Sbjct: 61  PPLPPWFQAELTQDEFLTSEQAEAEPFPEFSHPTDLVQDIESDPMIPAAAFPSYQQYMVS 120

Query: 144 EPVYGVPIIVETESGRGQKWKRL--------IKLFECLCPCFGITQ 165
            PVYG P++ +T  GR ++            ++L  C CPC  I +
Sbjct: 121 NPVYG-PVVQQT--GRRERSGGYFGCIIDIGLRLIRCFCPCVHIRE 154

[Close]
BLAST of Csa5G077760 vs. NCBI nr
Match: gi|566160169|ref|XP_006385190.1| (hypothetical protein POPTR_0003s00910g [Populus trichocarpa])

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10
Identity = 54/159 (33.96%), Postives = 71/159 (44.65%), Query Frame = 1 

Query: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPL 83
           M+KA KK LK  W + KK+ K  + +E   +     C C CS  T      QPSAPPLP 
Sbjct: 1   MIKAAKK-LKKFWPRKKKRKKTLQYHEPYYHHPPSSCHCCCSYPTAP---TQPSAPPLPP 60

Query: 84  WLNDAPTFLPPSTQSQFEHPDTA---------DEMV---EPLVANQWSYQQYLVAEPVYG 143
           WL    T+   S       P+ A          E+V    P+     SYQQYLV  PVYG
Sbjct: 61  WLEPELTYEAVSAPGLLSLPELAHPSHIQVPSQEIVMETTPIYPTLPSYQQYLVPNPVYG 120

Query: 144 VPIIVETESGRGQKWKRLI-----KLFECLCPCFGITQQ 166
           VP+  +    +   +   +      L  C CPCF I ++
Sbjct: 121 VPVEQKPRREKSTGFFGCVVTFCANLIRCFCPCFRIQEK 155

The following BLAST results are available for this feature:
BLAST of Csa5G077760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJG0_CUCSA5.3e-99100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1[more]
B9SPB8_RICCO5.4e-1135.67Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0496640 PE=4 SV=1[more]
A0A0D2TNG0_GOSRA9.3e-1136.14Uncharacterized protein OS=Gossypium raimondii GN=B456_009G114500 PE=4 SV=1[more]
B9N785_POPTR1.2e-1033.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s00910g PE=4 SV=1[more]
I1LT89_SOYBN2.7e-1040.00Uncharacterized protein OS=Glycine max GN=GLYMA_12G164000 PE=4 SV=1[more]
BLAST of Csa5G077760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194531|gb|KGN49708.1|7.6e-99100.00hypothetical protein Csa_5G077760 [Cucumis sativus][more]
gi|659121311|ref|XP_008460596.1|4.4e-6280.27PREDICTED: uncharacterized protein LOC103499377 [Cucumis melo][more]
gi|255573836|ref|XP_002527837.1|7.8e-1135.67PREDICTED: uncharacterized protein LOC8262569 [Ricinus communis][more]
gi|823224874|ref|XP_012445219.1|1.3e-1036.14PREDICTED: uncharacterized protein LOC105769255 [Gossypium raimondii][more]
gi|566160169|ref|XP_006385190.1|1.7e-1033.96hypothetical protein POPTR_0003s00910g [Populus trichocarpa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU091231cucumber EST collection version 3.0transcribed_cluster
CU093352cucumber EST collection version 3.0transcribed_cluster
CU114036cucumber EST collection version 3.0transcribed_cluster
CU121228cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G077760.1Csa5G077760.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU114036CU114036transcribed_cluster
CU091231CU091231transcribed_cluster
CU093352CU093352transcribed_cluster
CU121228CU121228transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G077760MELO3C022933Melon (DHL92) v3.5.1cumeB381
Csa5G077760Lsi11G000950Bottle gourd (USVL1VR-Ls)culsiB338
Csa5G077760MELO3C022933.2Melon (DHL92) v3.6.1cumedB365
Csa5G077760Cla97C11G206600Watermelon (97103) v2cuwmbB359
Csa5G077760CSPI05G01710Wild cucumber (PI 183967)cpicuB240
Csa5G077760Cucsa.183400Cucumber (Gy14) v1cgycuB280
Csa5G077760Cp4.1LG01g17150Cucurbita pepo (Zucchini)cpecuB448
Csa5G077760CsGy5G011760Cucumber (Gy14) v2cgybcuB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G077760Cucurbita moschata (Rifu)cmocuB745
Csa5G077760Watermelon (Charleston Gray)cuwcgB363
Csa5G077760Watermelon (97103) v1cuwmB436
Csa5G077760Cucurbita maxima (Rimu)cmacuB760