Cp4.1LG01g17150 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g17150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 11558821 .. 11559234 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG

mRNA sequence

ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG

Coding sequence (CDS)

ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG

Protein sequence

MLKAAKKKLKFWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDDRIFPPSVHPEEAEIAAPLVAAPLYQHYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPEA
BLAST of Cp4.1LG01g17150 vs. TrEMBL
Match: M5XIB2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026463mg PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20
Identity = 75/182 (41.21%), Postives = 90/182 (49.45%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKK-IPDPNDFPPPPPC-----------HCCTCHCSS-AIQPS 60
           M+KA KK LKFWSR K++KK +     +PPPPP            HCC+C  S+ + QPS
Sbjct: 1   MIKAVKK-LKFWSRKKRKKKTLHHQPYYPPPPPTRPAPLPPGPRHHCCSCSSSTYSTQPS 60

Query: 61  APPLPPWLD-----DRIFPPSVHPE------------------EAEIAAPLVAAPL---- 120
           APPLPPWLD     + +  P V P                    A+      ++PL    
Sbjct: 61  APPLPPWLDAEYTHEALLAPQVQPAPEFGYQADPRQQEPTMKTNADSGTTSTSSPLYLYP 120

Query: 121 ---YQHYMDPDPVYGVPII-----VQTDSRRDGSRSRRFA--VSGCVGDLGIRIIGCFCP 133
              YQ YM PDPVYGVPI       QT + R  +R R  A  V GCV D GIR   CFCP
Sbjct: 121 TSSYQQYMVPDPVYGVPIAQTQTQTQTQTPRATTRERSAAGGVFGCVVDFGIRFFRCFCP 180

BLAST of Cp4.1LG01g17150 vs. TrEMBL
Match: B9SPB8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0496640 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-19
Identity = 69/166 (41.57%), Postives = 80/166 (48.19%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKKI-PDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDDRI 60
           M+KAAKK  K W R KKRKK   +P  F PPP CHCC C  S+ +QPSAPPLPPWL+   
Sbjct: 1   MIKAAKKLRKLWPRKKKRKKTYQEPYYFLPPPSCHCC-CSYSTPVQPSAPPLPPWLESAQ 60

Query: 61  FPPSVH-------PEEA----------EIAA-----------PLVAAPL-YQHYMDPDPV 120
              ++        PEE           EI             P    PL YQ Y  P+PV
Sbjct: 61  THEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLTYQQYAVPNPV 120

Query: 121 YGVPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
           YGVP++ QT       R R     GC    G  +I CFCPCF   E
Sbjct: 121 YGVPVVEQTP-----RRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

BLAST of Cp4.1LG01g17150 vs. TrEMBL
Match: B9N785_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s00910g PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.3e-19
Identity = 63/160 (39.38%), Postives = 79/160 (49.38%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKKI---PDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDD 60
           M+KAAKK  KFW R KKRKK     +P    PP  CHCC  + ++  QPSAPPLPPWL+ 
Sbjct: 1   MIKAAKKLKKFWPRKKKRKKTLQYHEPYYHHPPSSCHCCCSYPTAPTQPSAPPLPPWLEP 60

Query: 61  RI------------FPPSVHPEEAEIAAPLV---------AAPLYQHYMDPDPVYGVPII 120
            +             P   HP   ++ +  +           P YQ Y+ P+PVYGVP  
Sbjct: 61  ELTYEAVSAPGLLSLPELAHPSHIQVPSQEIVMETTPIYPTLPSYQQYLVPNPVYGVP-- 120

Query: 121 VQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
           V+   RR+ S        GCV      +I CFCPCFR  E
Sbjct: 121 VEQKPRREKST----GFFGCVVTFCANLIRCFCPCFRIQE 154

BLAST of Cp4.1LG01g17150 vs. TrEMBL
Match: A0A0A0KJG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 1

Query: 1   MLKAAKKKLK-FWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSAI------QPSAPPLPP 60
           MLKA KKKLK  WS+ KK+ K   PN+       +CC CHCSS+       QPSAPPLP 
Sbjct: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPL 83

Query: 61  WLDD--RIFPPSV-----HPEEA-EIAAPLVAAP-LYQHYMDPDPVYGVPIIVQTDSRRD 120
           WL+D     PPS      HP+ A E+  PLVA    YQ Y+  +PVYGVPIIV+T+S R 
Sbjct: 84  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGR- 143

Query: 121 GSRSRRFAVSGCVGDLGIRIIGCFCPCF 133
           G + +R           I++  C CPCF
Sbjct: 144 GQKWKRL----------IKLFECLCPCF 160

BLAST of Cp4.1LG01g17150 vs. TrEMBL
Match: A0A0D2TNG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G114500 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17
Identity = 63/164 (38.41%), Postives = 78/164 (47.56%), Query Frame = 1

Query: 5   AKKKLKFWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSA-----------IQPSAPPLPP 64
           A KKLKFWSR K+++K   P       P HC  CHCS +           +QPSAPPLPP
Sbjct: 4   AVKKLKFWSRKKRKRKSLAPQ------PSHCF-CHCSHSTSSHYYQCNYPLQPSAPPLPP 63

Query: 65  WLDDRI---------------FPPSVHPE------EAEIAAPLVAAPLYQHYMDPDPVYG 124
           W    +               FP   HP       E++   P  A P YQ YM  +PVYG
Sbjct: 64  WFQAELTQDEFLTSEQAEAEPFPEFSHPTDLVQDIESDPMIPAAAFPSYQQYMVSNPVYG 123

Query: 125 VPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
            P++ QT     G R R     GC+ D+G+R+I CFCPC    E
Sbjct: 124 -PVVQQT-----GRRERSGGYFGCIIDIGLRLIRCFCPCVHIRE 154

BLAST of Cp4.1LG01g17150 vs. TAIR10
Match: AT4G24265.1 (AT4G24265.1 unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 6.2e-09
Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 1

Query: 7   KKLKFWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSA----IQPSAPPLPPWLDD--RIF 66
           KKL FWSR K+++K   P+      P HC   + S+A    ++P+APPLP W D+   + 
Sbjct: 2   KKLTFWSRKKRKRKQACPSQ-----PHHCSCEYSSTAVAVLVEPTAPPLPYWFDETRSLC 61

Query: 67  PPSV-----------HPEEAEI--AAPLVAA-------PLYQHYMDPDPVYGVPIIVQTD 126
           PP             H +E  I  A PL++          YQ YM P+P   V  +    
Sbjct: 62  PPETSSFPWTTHHLPHQQEETIVEATPLLSQVSDLRIYQSYQQYMVPNPTSNVHFVEPAT 121

Query: 127 SRRDGSRSRRFAVSGCVGDLGIRIIGCFCP 131
           ++R         + GCV +L   ++ CF P
Sbjct: 122 AKRS------VGIFGCVIELSSSLVRCFIP 140

BLAST of Cp4.1LG01g17150 vs. NCBI nr
Match: gi|645223475|ref|XP_008218648.1| (PREDICTED: homeobox protein Hox-C4 [Prunus mume])

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21
Identity = 75/174 (43.10%), Postives = 85/174 (48.85%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKKIPDPNDF-PPPPPC-----------HCCTCHCSS-AIQPS 60
           M+KA KK LKFWSR K++KK      + PPPPP            HCC+C  S+ + QPS
Sbjct: 1   MIKAVKK-LKFWSRKKRKKKTHHHQPYYPPPPPTRPAPLPPGPRHHCCSCSSSTYSTQPS 60

Query: 61  APPLPPWLD-----DRIFPPSVHP--EEAEIAAPLVAAPL------------------YQ 120
           APPLPPWLD     + +F P V P  E    A P    P                   YQ
Sbjct: 61  APPLPPWLDAEYTHEALFAPLVQPAPEFGYQADPRQQEPTMKTNAGSGTTSIYPTSSSYQ 120

Query: 121 HYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
            YM PDPVYGVP + QT       RS    V GCV D GIR   CFCPCF   E
Sbjct: 121 QYMVPDPVYGVP-VAQTTRATTTERSAAAGVFGCVVDFGIRFFRCFCPCFHIRE 172

BLAST of Cp4.1LG01g17150 vs. NCBI nr
Match: gi|596248907|ref|XP_007224633.1| (hypothetical protein PRUPE_ppa026463mg, partial [Prunus persica])

HSP 1 Score: 105.5 bits (262), Expect = 7.4e-20
Identity = 75/182 (41.21%), Postives = 90/182 (49.45%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKK-IPDPNDFPPPPPC-----------HCCTCHCSS-AIQPS 60
           M+KA KK LKFWSR K++KK +     +PPPPP            HCC+C  S+ + QPS
Sbjct: 1   MIKAVKK-LKFWSRKKRKKKTLHHQPYYPPPPPTRPAPLPPGPRHHCCSCSSSTYSTQPS 60

Query: 61  APPLPPWLD-----DRIFPPSVHPE------------------EAEIAAPLVAAPL---- 120
           APPLPPWLD     + +  P V P                    A+      ++PL    
Sbjct: 61  APPLPPWLDAEYTHEALLAPQVQPAPEFGYQADPRQQEPTMKTNADSGTTSTSSPLYLYP 120

Query: 121 ---YQHYMDPDPVYGVPII-----VQTDSRRDGSRSRRFA--VSGCVGDLGIRIIGCFCP 133
              YQ YM PDPVYGVPI       QT + R  +R R  A  V GCV D GIR   CFCP
Sbjct: 121 TSSYQQYMVPDPVYGVPIAQTQTQTQTQTPRATTRERSAAGGVFGCVVDFGIRFFRCFCP 180

BLAST of Cp4.1LG01g17150 vs. NCBI nr
Match: gi|255573836|ref|XP_002527837.1| (PREDICTED: uncharacterized protein LOC8262569 [Ricinus communis])

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-19
Identity = 69/166 (41.57%), Postives = 80/166 (48.19%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKKI-PDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDDRI 60
           M+KAAKK  K W R KKRKK   +P  F PPP CHCC C  S+ +QPSAPPLPPWL+   
Sbjct: 1   MIKAAKKLRKLWPRKKKRKKTYQEPYYFLPPPSCHCC-CSYSTPVQPSAPPLPPWLESAQ 60

Query: 61  FPPSVH-------PEEA----------EIAA-----------PLVAAPL-YQHYMDPDPV 120
              ++        PEE           EI             P    PL YQ Y  P+PV
Sbjct: 61  THEAISSTEVQQLPEEGYQSQFQFPSQEIVVETDTNAIYPTLPNTDTPLTYQQYAVPNPV 120

Query: 121 YGVPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
           YGVP++ QT       R R     GC    G  +I CFCPCF   E
Sbjct: 121 YGVPVVEQTP-----RRERSAGFFGCFVKFGANLIRCFCPCFHIRE 160

BLAST of Cp4.1LG01g17150 vs. NCBI nr
Match: gi|566160169|ref|XP_006385190.1| (hypothetical protein POPTR_0003s00910g [Populus trichocarpa])

HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19
Identity = 63/160 (39.38%), Postives = 79/160 (49.38%), Query Frame = 1

Query: 1   MLKAAKKKLKFWSRSKKRKKI---PDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDD 60
           M+KAAKK  KFW R KKRKK     +P    PP  CHCC  + ++  QPSAPPLPPWL+ 
Sbjct: 1   MIKAAKKLKKFWPRKKKRKKTLQYHEPYYHHPPSSCHCCCSYPTAPTQPSAPPLPPWLEP 60

Query: 61  RI------------FPPSVHPEEAEIAAPLV---------AAPLYQHYMDPDPVYGVPII 120
            +             P   HP   ++ +  +           P YQ Y+ P+PVYGVP  
Sbjct: 61  ELTYEAVSAPGLLSLPELAHPSHIQVPSQEIVMETTPIYPTLPSYQQYLVPNPVYGVP-- 120

Query: 121 VQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPE 137
           V+   RR+ S        GCV      +I CFCPCFR  E
Sbjct: 121 VEQKPRREKST----GFFGCVVTFCANLIRCFCPCFRIQE 154

BLAST of Cp4.1LG01g17150 vs. NCBI nr
Match: gi|700194531|gb|KGN49708.1| (hypothetical protein Csa_5G077760 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-18
Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 1

Query: 1   MLKAAKKKLK-FWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSAI------QPSAPPLPP 60
           MLKA KKKLK  WS+ KK+ K   PN+       +CC CHCSS+       QPSAPPLP 
Sbjct: 24  MLKATKKKLKGLWSKMKKKNKKKKPNETQTNSYQYCCICHCSSSTHQHNQQQPSAPPLPL 83

Query: 61  WLDD--RIFPPSV-----HPEEA-EIAAPLVAAP-LYQHYMDPDPVYGVPIIVQTDSRRD 120
           WL+D     PPS      HP+ A E+  PLVA    YQ Y+  +PVYGVPIIV+T+S R 
Sbjct: 84  WLNDAPTFLPPSTQSQFEHPDTADEMVEPLVANQWSYQQYLVAEPVYGVPIIVETESGR- 143

Query: 121 GSRSRRFAVSGCVGDLGIRIIGCFCPCF 133
           G + +R           I++  C CPCF
Sbjct: 144 GQKWKRL----------IKLFECLCPCF 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
M5XIB2_PRUPE5.1e-2041.21Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026463mg PE=4 S... [more]
B9SPB8_RICCO2.5e-1941.57Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0496640 PE=4 SV=1[more]
B9N785_POPTR4.3e-1939.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s00910g PE=4 SV=1[more]
A0A0A0KJG0_CUCSA2.2e-1845.95Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1[more]
A0A0D2TNG0_GOSRA4.1e-1738.41Uncharacterized protein OS=Gossypium raimondii GN=B456_009G114500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G24265.16.2e-0930.67 unknown protein[more]
Match NameE-valueIdentityDescription
gi|645223475|ref|XP_008218648.1|3.9e-2143.10PREDICTED: homeobox protein Hox-C4 [Prunus mume][more]
gi|596248907|ref|XP_007224633.1|7.4e-2041.21hypothetical protein PRUPE_ppa026463mg, partial [Prunus persica][more]
gi|255573836|ref|XP_002527837.1|3.7e-1941.57PREDICTED: uncharacterized protein LOC8262569 [Ricinus communis][more]
gi|566160169|ref|XP_006385190.1|6.2e-1939.38hypothetical protein POPTR_0003s00910g [Populus trichocarpa][more]
gi|700194531|gb|KGN49708.1|3.1e-1845.95hypothetical protein Csa_5G077760 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17150.1Cp4.1LG01g17150.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17150Cucsa.183400Cucumber (Gy14) v1cgycpeB0502
Cp4.1LG01g17150Csa5G077760Cucumber (Chinese Long) v2cpecuB448
Cp4.1LG01g17150Lsi11G000950Bottle gourd (USVL1VR-Ls)cpelsiB321
The following gene(s) are paralogous to this gene:

None