Cp4.1LG01g17150.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG ATGCTCAAGGCCGCCAAGAAGAAACTCAAATTCTGGTCCAGATCCAAGAAGCGGAAGAAAATCCCCGATCCCAACGATTTCCCTCCGCCGCCGCCCTGCCACTGCTGCACTTGCCACTGCTCCTCCGCAATCCAGCCCTCAGCTCCGCCACTTCCCCCATGGCTAGACGATCGGATCTTTCCGCCATCGGTACATCCCGAGGAAGCAGAAATCGCAGCGCCGCTTGTGGCCGCTCCGCTGTACCAGCATTACATGGATCCGGATCCGGTGTACGGAGTGCCGATCATCGTGCAAACAGATAGCAGAAGAGATGGATCGAGATCGAGAAGGTTCGCGGTTTCCGGATGTGTCGGTGATTTGGGTATCAGAATAATTGGATGCTTCTGTCCCTGTTTTCGCACTCCAGAAGCTTAG MLKAAKKKLKFWSRSKKRKKIPDPNDFPPPPPCHCCTCHCSSAIQPSAPPLPPWLDDRIFPPSVHPEEAEIAAPLVAAPLYQHYMDPDPVYGVPIIVQTDSRRDGSRSRRFAVSGCVGDLGIRIIGCFCPCFRTPEA
BLAST of Cp4.1LG01g17150.1 vs. TrEMBL
Match: M5XIB2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026463mg PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.1e-20 Identity = 75/182 (41.21%), Postives = 90/182 (49.45%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. TrEMBL
Match: B9SPB8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0496640 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.5e-19 Identity = 69/166 (41.57%), Postives = 80/166 (48.19%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. TrEMBL
Match: B9N785_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s00910g PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.3e-19 Identity = 63/160 (39.38%), Postives = 79/160 (49.38%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. TrEMBL
Match: A0A0A0KJG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G077760 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18 Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. TrEMBL
Match: A0A0D2TNG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G114500 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.1e-17 Identity = 63/164 (38.41%), Postives = 78/164 (47.56%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. TAIR10
Match: AT4G24265.1 (AT4G24265.1 unknown protein) HSP 1 Score: 57.8 bits (138), Expect = 6.2e-09 Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. NCBI nr
Match: gi|645223475|ref|XP_008218648.1| (PREDICTED: homeobox protein Hox-C4 [Prunus mume]) HSP 1 Score: 109.8 bits (273), Expect = 3.9e-21 Identity = 75/174 (43.10%), Postives = 85/174 (48.85%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. NCBI nr
Match: gi|596248907|ref|XP_007224633.1| (hypothetical protein PRUPE_ppa026463mg, partial [Prunus persica]) HSP 1 Score: 105.5 bits (262), Expect = 7.4e-20 Identity = 75/182 (41.21%), Postives = 90/182 (49.45%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. NCBI nr
Match: gi|255573836|ref|XP_002527837.1| (PREDICTED: uncharacterized protein LOC8262569 [Ricinus communis]) HSP 1 Score: 103.2 bits (256), Expect = 3.7e-19 Identity = 69/166 (41.57%), Postives = 80/166 (48.19%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. NCBI nr
Match: gi|566160169|ref|XP_006385190.1| (hypothetical protein POPTR_0003s00910g [Populus trichocarpa]) HSP 1 Score: 102.4 bits (254), Expect = 6.2e-19 Identity = 63/160 (39.38%), Postives = 79/160 (49.38%), Query Frame = 1
BLAST of Cp4.1LG01g17150.1 vs. NCBI nr
Match: gi|700194531|gb|KGN49708.1| (hypothetical protein Csa_5G077760 [Cucumis sativus]) HSP 1 Score: 100.1 bits (248), Expect = 3.1e-18 Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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