Csa4G022210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G022210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 2362540 .. 2363101 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAGAGAGTTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCCTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTGTGAGTTTTCTTAACTTTTTTTTTTCTTCTCAATCTTAAGATGTTCTTGTTTTAGTTTGTTTAAATGAGTTATTATTTCGTTTTCTATTTTATAATTAGGGTTATAAACACTATTCTTCAATATCTAATTCTGCCTAGTATTGTTTTTATCTAATTTTTAACCTATTTTTACGAGTGTGTTTTCAAAATGATCCAAACCAAAGTGCTAGCTAGTAAGTTACGTTATAATTATAATTATAGGGTTTGAAAAATGATGTTAATTTGAATCTGTAATTTGATTTACTTTTATGGCTTTAATTTGTTTCAGATAAAATGAAGGGGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAA

mRNA sequence

ATGGCTTCCAAGAGAGTTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCCTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTATAAAATGAAGGGGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAA

Coding sequence (CDS)

ATGGCTTCCAAGAGAGTTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCCTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTATAAAATGAAGGGGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAA

Protein sequence

MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKGELQRRFEDLLKATTDNDIPRGGNY*
Homology
[Close]
BLAST of Csa4G022210 vs. TrEMBL
Match: A0A0A0KW84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022210 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.8e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 

Query: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60
          MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG
Sbjct: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60

Query: 61 ELQRRFEDLLKATTDNDIPRGGNY 85
          ELQRRFEDLLKATTDNDIPRGGNY
Sbjct: 61 ELQRRFEDLLKATTDNDIPRGGNY 84

[Close]
BLAST of Csa4G022210 vs. TrEMBL
Match: A0A0A0KU24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022220 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-30
Identity = 72/85 (84.71%), Postives = 77/85 (90.59%), Query Frame = 1 

Query: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPL-DDAFNLQMDASSLFYKMK 60
          MAS RVSMIL V+FFIIML ISSNNNYN SARKFLDVN PL DDAF+LQM ASSLFYK++
Sbjct: 1  MASNRVSMILYVLFFIIMLSISSNNNYNASARKFLDVNFPLLDDAFDLQMGASSLFYKLE 60

Query: 61 GELQRRFEDLLKATTDNDIPRGGNY 85
          GELQ+RFEDLLK TTDNDIPRGGNY
Sbjct: 61 GELQKRFEDLLKTTTDNDIPRGGNY 85

[Close]
BLAST of Csa4G022210 vs. NCBI nr
Match: gi|700197976|gb|KGN53134.1| (hypothetical protein Csa_4G022210 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 9.8e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 1 

Query: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60
          MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG
Sbjct: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60

Query: 61 ELQRRFEDLLKATTDNDIPRGGNY 85
          ELQRRFEDLLKATTDNDIPRGGNY
Sbjct: 61 ELQRRFEDLLKATTDNDIPRGGNY 84

[Close]
BLAST of Csa4G022210 vs. NCBI nr
Match: gi|700197977|gb|KGN53135.1| (hypothetical protein Csa_4G022220 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-30
Identity = 72/85 (84.71%), Postives = 77/85 (90.59%), Query Frame = 1 

Query: 1  MASKRVSMILNVVFFIIMLLISSNNNYNVSARKFLDVNTPL-DDAFNLQMDASSLFYKMK 60
          MAS RVSMIL V+FFIIML ISSNNNYN SARKFLDVN PL DDAF+LQM ASSLFYK++
Sbjct: 1  MASNRVSMILYVLFFIIMLSISSNNNYNASARKFLDVNFPLLDDAFDLQMGASSLFYKLE 60

Query: 61 GELQRRFEDLLKATTDNDIPRGGNY 85
          GELQ+RFEDLLK TTDNDIPRGGNY
Sbjct: 61 GELQKRFEDLLKTTTDNDIPRGGNY 85

The following BLAST results are available for this feature:
BLAST of Csa4G022210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW84_CUCSA6.8e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022210 PE=4 SV=1[more]
A0A0A0KU24_CUCSA1.2e-3084.71Uncharacterized protein OS=Cucumis sativus GN=Csa_4G022220 PE=4 SV=1[more]
BLAST of Csa4G022210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197976|gb|KGN53134.1|9.8e-39100.00hypothetical protein Csa_4G022210 [Cucumis sativus][more]
gi|700197977|gb|KGN53135.1|1.7e-3084.71hypothetical protein Csa_4G022220 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G022210.1Csa4G022210.1mRNA