CsGy4G003760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G003760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 2389739 .. 2390438 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAGAGAGCTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCTTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTGTGAGTTTTCTTAACTTTTTTTTTTCTTCTCAATCTTAAGATGTTCTTGTTTTAGTTTGTTTCAATGAGTTATTATTTCGTTTTCTATTTTATAATTAGGGTTATAAACACTATTCTTCAATATCTAATTCTGCCTAGTATTGTTTTTATCTAATTTTTAACCTATTTTTACGAGTGTGTTTTCAAAATGATCCAAACCAAAGTGCTAGCTAGTAAGTTACGTTATAATTATAATTATAGGGTTTGAAAAATGATGTTAATTTGAATCTGTAATTTGATTTACTTTTATGGCTTTAATTTGTTTCAGATAAAATGAAGGAGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAATTAAAATGGAAAATACAAAAAGTATATAGCAATTGATCGTTAATATCTTTTCATATGTTTTGTATTTGAAATTGCAGCATATTAATGAAATAACTTATGCTACTTTCTTGAGATGAAACTTTTTGAACTTTTTTTTCT

mRNA sequence

ATGGCTTCCAAGAGAGCTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCTTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTATAAAATGAAGGAGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAATTAAAATGGAAAATACAAAAAGTATATAGCAATTGATCGTTAATATCTTTTCATATGTTTTGTATTTGAAATTGCAGCATATTAATGAAATAACTTATGCTACTTTCTTGAGATGAAACTTTTTGAACTTTTTTTTCT

Coding sequence (CDS)

ATGGCTTCCAAGAGAGCTTCAATGATTTTGAATGTGGTGTTCTTCATTATTATGCTTTTAATTTCATCTAATAACAATTATAATGTTTCTGCAAGAAAATTTCTTGATGTTAATACCCTTCTTGATGATGCCTTCAACCTTCAAATGGATGCATCTTCATTATTCTATAAAATGAAGGAGGAGCTACAAAGGAGATTCGAGGATTTATTAAAAGCAACCACTGATAATGATATTCCTCGAGGTGGAAACTACTAA

Protein sequence

MASKRASMILNVVFFIIMLLISSNNNYNVSARKFLDVNTLLDDAFNLQMDASSLFYKMKEELQRRFEDLLKATTDNDIPRGGNY
Homology
[Close]
BLAST of CsGy4G003760 vs. NCBI nr
Match: KGN53134.1 (hypothetical protein Csa_4G022210 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MASKRASMILNXXXXXXXXXXXXXXXYNVSARKFLDVNTLLDDAFNLQMDASSLFYKMKE 60
          MASKR SMILN XXXXXXXXXXXXXXYNVSARKFLDVNT LDDAFNLQMDASSLFYKMK 
Sbjct: 1  MASKRVSMILNVXXXXXXXXXXXXXXYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60

Query: 61 ELQRRFEDLLKATTDNDIPRGGNY 85
          ELQRRFEDLLKATTDNDIPRGGNY
Sbjct: 61 ELQRRFEDLLKATTDNDIPRGGNY 84

[Close]
BLAST of CsGy4G003760 vs. NCBI nr
Match: KGN53135.1 (hypothetical protein Csa_4G022220 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 6.7e-20
Identity = 57/85 (67.06%), Postives = 61/85 (71.76%), Query Frame = 0 

Query: 1  MASKRASMILNXXXXXXXXXXXXXXXYNVSARKFLDVN-TLLDDAFNLQMDASSLFYKMK 60
          MAS R SMIL                YN SARKFLDVN  LLDDAF+LQM ASSLFYK++
Sbjct: 1  MASNRVSMILYVLFFIIMLSISSNNNYNASARKFLDVNFPLLDDAFDLQMGASSLFYKLE 60

Query: 61 EELQRRFEDLLKATTDNDIPRGGNY 85
           ELQ+RFEDLLK TTDNDIPRGGNY
Sbjct: 61 GELQKRFEDLLKTTTDNDIPRGGNY 85

[Close]
BLAST of CsGy4G003760 vs. TrEMBL
Match: tr|A0A0A0KW84|A0A0A0KW84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022210 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26
Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 1  MASKRASMILNXXXXXXXXXXXXXXXYNVSARKFLDVNTLLDDAFNLQMDASSLFYKMKE 60
          MASKR SMILN XXXXXXXXXXXXXXYNVSARKFLDVNT LDDAFNLQMDASSLFYKMK 
Sbjct: 1  MASKRVSMILNVXXXXXXXXXXXXXXYNVSARKFLDVNTPLDDAFNLQMDASSLFYKMKG 60

Query: 61 ELQRRFEDLLKATTDNDIPRGGNY 85
          ELQRRFEDLLKATTDNDIPRGGNY
Sbjct: 61 ELQRRFEDLLKATTDNDIPRGGNY 84

[Close]
BLAST of CsGy4G003760 vs. TrEMBL
Match: tr|A0A0A0KU24|A0A0A0KU24_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022220 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.4e-20
Identity = 57/85 (67.06%), Postives = 61/85 (71.76%), Query Frame = 0 

Query: 1  MASKRASMILNXXXXXXXXXXXXXXXYNVSARKFLDVN-TLLDDAFNLQMDASSLFYKMK 60
          MAS R SMIL                YN SARKFLDVN  LLDDAF+LQM ASSLFYK++
Sbjct: 1  MASNRVSMILYVLFFIIMLSISSNNNYNASARKFLDVNFPLLDDAFDLQMGASSLFYKLE 60

Query: 61 EELQRRFEDLLKATTDNDIPRGGNY 85
           ELQ+RFEDLLK TTDNDIPRGGNY
Sbjct: 61 GELQKRFEDLLKTTTDNDIPRGGNY 85

The following BLAST results are available for this feature:
BLAST of CsGy4G003760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53134.13.7e-2695.24hypothetical protein Csa_4G022210 [Cucumis sativus][more]
KGN53135.16.7e-2067.06hypothetical protein Csa_4G022220 [Cucumis sativus][more]
BLAST of CsGy4G003760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G003760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G003760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KW84|A0A0A0KW84_CUCSA2.4e-2695.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022210 PE=4 SV=1[more]
tr|A0A0A0KU24|A0A0A0KU24_CUCSA4.4e-2067.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022220 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G003760.1CsGy4G003760.1mRNA