Csa3G232440 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G232440
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 15074777 .. 15077421 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCACGTCAAAAGAAAAGTACTGAAACACCGATTTTTCATTTATGGTGTTGGGAGTATGTACAAACTTTCCCGAGAGGCCATGCAAAGTTTCCTGTTGTTACTAATTACTGCTTTGGAAAATGGCAAACATTGTCGATGGTAACATTTCAACATCGGGAGATGTGCCTATTCCGAACGTTGTCGGGAGAAGTGCCCATCCCTAACGTTTCTATCGTTTCTATCATTAACGTCGGAAGAACTCCAATTTTTTGTAATGTCGTTCATCATCTTCTCCAAAAAATAATGGCGGATGGAATTTTTAGAAATTGAAAATAACCCATTACCACCAAAACTTGGTTTTGCACTTCAGCACCACAATCAAGAAGATTTGACTGGAGGAGCGTGGCGTTTTCTGTATGAGAAGCAGCTCACGGTATGGGAATAGAGATGGCCACTGGAAGCACCAATCCCTATGCCAGTTAAGCACATCCAATCTCTCTGAATCTCAACCCCATCTTAAATTTTAAACTTTCCTCGTGGAAGTGCAATTGCCCTCCATTAATCTCCACTTCCCATTGCTTCTCTTGCTTTTCCCGTTCATTTTTGCAACAACCCATTTCGGGTTCCATTAATTCCCTCAAGTTTAGGATTTCGATCGAAAATTGTGGGTTGTTTTTCTTTTCTCCTTTCCTGGATTCTTGTAATTCTGAAACTTTCTAGAGATCTCTGTTGATGTTCGATTTTAGCTCAGTGTAACTTAGGATGAATTGAGGGTTTGTTAAACGGTCTGGGATTTTTGGGTCGGGACCGAGGTTTAGGGTTTTTAACTGATCATGATCATCATCCTCTTGCTGTTAATTCACACATGTGATCTGGCCGAGTAGTTTTGATTCCTGGGTCTGTGTTTTTCCTTGGAGATTTACTTCTTCAAGGGACTCAATTGCTGCTCCACTGTTAATTTGGTTCTGATTTGAAAAAGTAACTTCAAGTGGGAAGTCAAATCAATGACATCATCTGGGTTTTGCTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTTTATGTCTTTGGCCATGGCCCTGAAACCGCAATCAAGCTGCAGGGATCTAGTCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTACTTTTATTCATGGTGGCTTTTGTCAGAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGCTGCGTGTTGCTTCACTTAGGTATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCGGGATTGGCCTCGACAGGTTGTTGGGGATGTTACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAATACGATTAACTTCAAGTTTTACTTCTCTTTCAGCTGGTATTATTGTTTGAAATTGTCAATTATGACTCTGCTTCTTAATTATGATGAGTTTGATAGAAATTGATATTTGTTTTCGCTGGCTTTTGCTTCCATTGTGTTTTAAGAATAGGGGGTTCGGGGACTGGAAAGTGAGATAGAAATGGAAGATCAATTTGATTAGTTACCAAGCTTGAATTTCGTTTCTGTTCTGTGTCTGGATAGATAACACATTCATTTGTCTGGCTATCTTCTACAAGATTGTGGATTGTACTAAATGGCATTTTGGACCATGAATATGACCCCTGGAGTCGTAACAGAGGCAAGGAGCAACTCGTGGTATACTTCTAGACAAAATGAGATATTAATAAACCAATATCTCAGCGACAGAAGAAAGTGTTTGAGACTGAGCAACTTGAGCGATTCTAGATTGGGGAATGACTTTAAATTTTAAAGAGATTTTTCTAGGAAGCATGTGAGTGATGATAAAAAATGTGAAAGAAATTGGGGTTTTCTTTTTGCAGAGTGATGATAAAACATGCTATGTGACACATTTAGATTGCTAAAGAAGTGGGCAATTGGAAGTATTGGAGCTATCAAGTGCAGAATCTTGGGTCTTAATTGTTGTGCTAAAATATTTGATTTCCATCTCAGATTGCGGAGTTTATACATCTTGAAGGACACTAATAATAGTATCAAGGTTTCAAGTCCCCGAAATGCAGATGACTTGCCCCATTTCGAATACTAATCCCATCATATTTGCTTTGTGCTTTGTTTAATCATGTCAATGGCACAGTATTGGAACCCTGAGTCTGTTCTCCCCATTTGGAACATCAAAATTCTCTTTTTGTTTGGGGGAAAGACATGATGATTCTGGAAACATACGATGATGCTTCACTGACAGTTCGGTTAATTGATTAAAAGGCAAGTCGCGGCCGTGAGATCAAGTTATAGTACCCATTCATGTAGGATACTGAAGTTTCTAAGTTTTGGATGCCAAATGCTATGAGAGTGCCTTTCCTATAAAATTGATAGAAGCAATTAGCAAAAGTGGGCTAGGCCAAACACTGGTTCAAAACCTGGGAAAAGTAAAGTCTTCAATACGTTGTTAGCTTGGAGCTGGCAGTGCTTTTACTCAAACTCTTTCCATGGCTTTGACTGGTTGATGTGAATGAAAAAAATTATTTTTCTTGAACGTGTGATTTGTCTTTCAGACAG

mRNA sequence

ATGACATCATCTGGGTTTTGCTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTTTATGTCTTTGGCCATGGCCCTGAAACCGCAATCAAGCTGCAGGGATCTAGTCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCGGGATTGGCCTCGACAGGTTGTTGGGGATGTTACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAATACGATTAA

Coding sequence (CDS)

ATGACATCATCTGGGTTTTGCTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTTTATGTCTTTGGCCATGGCCCTGAAACCGCAATCAAGCTGCAGGGATCTAGTCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCGGGATTGGCCTCGACAGGTTGTTGGGGATGTTACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAATACGATTAA

Protein sequence

MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD*

Homology

[Close]

BLAST of Csa3G232440 vs. TrEMBL
Match: A0A0A0LAF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232440 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-57
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD 110
           FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
Sbjct: 61  FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD 109

[Close]

BLAST of Csa3G232440 vs. TrEMBL
Match: K7K2X6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G099500 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-36
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SS + L+C+LHS IALTCGALM+FYS E++V GH  ETA K QG++PHDQLLI TSDS
Sbjct: 1   MVSSIYTLMCVLHSTIALTCGALMIFYSKEIFVLGHRSETASKFQGTTPHDQLLIDTSDS 60

Query: 61  FSGMAI--------------------WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL 110
           FSG+ +                    WR +FERKLEDLA +WPR  +GD+ LA+SWVFFL
Sbjct: 61  FSGLLLFTIGFLLLMVAFVKDIDFQMWRFFFERKLEDLAHEWPRHAIGDIALAISWVFFL 120

[Close]

BLAST of Csa3G232440 vs. TrEMBL
Match: I1KCN0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G188700 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-36
Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SS + L+C+LHS IALTCGALM+FYS E++V GH  ETA KLQG++P+DQLLI TSDS
Sbjct: 1   MVSSIYTLMCVLHSTIALTCGALMIFYSKEIFVLGHRSETASKLQGTTPYDQLLIDTSDS 60

Query: 61  FSGMAI--------------------WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL 110
           FSG+ +                    WR +FERKL DLA +WPR VVGD+ LA+SWVFFL
Sbjct: 61  FSGLLLFIIGFLLLMVAFVKDIDFQMWRFFFERKLGDLAHEWPRHVVGDIALAISWVFFL 120

[Close]

BLAST of Csa3G232440 vs. TrEMBL
Match: A0A067K5H0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-35
Identity = 84/144 (58.33%), Postives = 98/144 (68.06%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SSGF LICMLHSLIALTCGALM+FY++EVYVFGHG E A KL+GS+PHDQLLI+TS+S
Sbjct: 1   MGSSGFSLICMLHSLIALTCGALMVFYTNEVYVFGHGVEVATKLKGSTPHDQLLIQTSES 60

Query: 61  FSGMAIWRVYF---------ERK--------------------------LEDLARDWPRQ 110
           FSG+ ++ + F         +R+                          LEDLA D PRQ
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCILLHVSVAFWRVYFEWMLEDLANDLPRQ 120

[Close]

BLAST of Csa3G232440 vs. TrEMBL
Match: K7MM47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G172300 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.9e-35
Identity = 75/129 (58.14%), Postives = 91/129 (70.54%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SS +  +C+LHS+IALTCGALM+FYS E+ V GH  ETA KLQG++P+DQLLI TSDS
Sbjct: 1   MVSSIYTFMCVLHSIIALTCGALMIFYSKEISVLGHRSETASKLQGTTPYDQLLIDTSDS 60

Query: 61  FSGMAI--------------------WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL 110
           FSG+ +                    WR +FERKL DLA +WPR  VGD+ LA+SWVFFL
Sbjct: 61  FSGLLLFTIGFLLLMVAFVKDIDFQMWRFFFERKLGDLAHEWPRHAVGDIALAISWVFFL 120

[Close]

BLAST of Csa3G232440 vs. TAIR10
Match: AT1G53035.1 (AT1G53035.1 unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 9.0e-27
Identity = 61/144 (42.36%), Postives = 79/144 (54.86%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S S
Sbjct: 7   MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query: 61  FSGMAIWRVYFERKLEDLARD-----------------------------------WPRQ 110
           FSG+ ++ +     +    +D                                   WP+Q
Sbjct: 67  FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

[Close]

BLAST of Csa3G232440 vs. TAIR10
Match: AT3G15358.1 (AT3G15358.1 unknown protein)

HSP 1 Score: 111.7 bits (278), Expect = 2.9e-25
Identity = 60/144 (41.67%), Postives = 80/144 (55.56%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S S
Sbjct: 1   MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query: 61  FSGMAIWRV--------------------------YFERKLEDLARDW---------PRQ 110
           FSG+ ++ +                          Y    L  +  +W         P+Q
Sbjct: 61  FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

[Close]

BLAST of Csa3G232440 vs. NCBI nr
Match: gi|700202489|gb|KGN57622.1| (hypothetical protein Csa_3G232440 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-57
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD 110
           FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD
Sbjct: 61  FSGMAIWRVYFERKLEDLARDWPRQVVGDVTLALSWVFFLVYSWREKYD 109

[Close]

BLAST of Csa3G232440 vs. NCBI nr
Match: gi|778680327|ref|XP_011651290.1| (PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 100/144 (69.44%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGMAIWRV-----------------YFERK------------------LEDLARDWPRQ 110
           FSG+ ++ V                 +F +                   LEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGLLLFMVAFVRDREFQSFFAKGCVLLHLGMAIWRVYFERKLEDLARDWPRQ 120

[Close]

BLAST of Csa3G232440 vs. NCBI nr
Match: gi|659112034|ref|XP_008456033.1| (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44
Identity = 99/144 (68.75%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SSGF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS
Sbjct: 1   MASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60

Query: 61  FSGMAIWRVYF---------ERK--------------------------LEDLARDWPRQ 110
           FSG+ ++ V F         +R+                          LEDLARDWPRQ
Sbjct: 61  FSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQ 120

[Close]

BLAST of Csa3G232440 vs. NCBI nr
Match: gi|947127802|gb|KRH75656.1| (hypothetical protein GLYMA_01G099500 [Glycine max])

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SS + L+C+LHS IALTCGALM+FYS E++V GH  ETA K QG++PHDQLLI TSDS
Sbjct: 1   MVSSIYTLMCVLHSTIALTCGALMIFYSKEIFVLGHRSETASKFQGTTPHDQLLIDTSDS 60

Query: 61  FSGMAI--------------------WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL 110
           FSG+ +                    WR +FERKLEDLA +WPR  +GD+ LA+SWVFFL
Sbjct: 61  FSGLLLFTIGFLLLMVAFVKDIDFQMWRFFFERKLEDLAHEWPRHAIGDIALAISWVFFL 120

[Close]

BLAST of Csa3G232440 vs. NCBI nr
Match: gi|947106101|gb|KRH54484.1| (hypothetical protein GLYMA_06G188700 [Glycine max])

HSP 1 Score: 158.7 bits (400), Expect = 5.9e-36
Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = 1


Query: 1   MTSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDS 60
           M SS + L+C+LHS IALTCGALM+FYS E++V GH  ETA KLQG++P+DQLLI TSDS
Sbjct: 1   MVSSIYTLMCVLHSTIALTCGALMIFYSKEIFVLGHRSETASKLQGTTPYDQLLIDTSDS 60

Query: 61  FSGMAI--------------------WRVYFERKLEDLARDWPRQVVGDVTLALSWVFFL 110
           FSG+ +                    WR +FERKL DLA +WPR VVGD+ LA+SWVFFL
Sbjct: 61  FSGLLLFIIGFLLLMVAFVKDIDFQMWRFFFERKLGDLAHEWPRHVVGDIALAISWVFFL 120

The following BLAST results are available for this feature:

BLAST of Csa3G232440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAF1_CUCSA	1.1e-57	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G232440 PE=4 SV=1	[more]
K7K2X6_SOYBN	1.4e-36	58.91	Uncharacterized protein OS=Glycine max GN=GLYMA_01G099500 PE=4 SV=1	[more]
I1KCN0_SOYBN	4.1e-36	59.69	Uncharacterized protein OS=Glycine max GN=GLYMA_06G188700 PE=4 SV=1	[more]
A0A067K5H0_JATCU	1.2e-35	58.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1	[more]
K7MM47_SOYBN	5.9e-35	58.14	Uncharacterized protein OS=Glycine max GN=GLYMA_17G172300 PE=4 SV=1	[more]

BLAST of Csa3G232440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53035.1	9.0e-27	42.36	unknown protein	[more]
AT3G15358.1	2.9e-25	41.67	unknown protein	[more]

BLAST of Csa3G232440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202489\|gb\|KGN57622.1\|	1.6e-57	100.00	hypothetical protein Csa_3G232440 [Cucumis sativus]	[more]
gi\|778680327\|ref\|XP_011651290.1\|	1.4e-45	69.44	PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]	[more]
gi\|659112034\|ref\|XP_008456033.1\|	4.5e-44	68.75	PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]	[more]
gi\|947127802\|gb\|KRH75656.1\|	2.0e-36	58.91	hypothetical protein GLYMA_01G099500 [Glycine max]	[more]
gi\|947106101\|gb\|KRH54484.1\|	5.9e-36	59.69	hypothetical protein GLYMA_06G188700 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006825	copper ion transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016531	copper chaperone activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU110744	cucumber EST collection version 3.0	transcribed_cluster
CU113424	cucumber EST collection version 3.0	transcribed_cluster
CU132463	cucumber EST collection version 3.0	transcribed_cluster
CU139986	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G232440.1	Csa3G232440.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU132463	CU132463	transcribed_cluster
CU110744	CU110744	transcribed_cluster
CU139986	CU139986	transcribed_cluster
CU113424	CU113424	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34274	FAMILY NOT NAMED	coord: 1..109 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G232440	MELO3C019413	Melon (DHL92) v3.5.1	cumeB166
Csa3G232440	Lsi05G001470	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G232440	MELO3C019413.2	Melon (DHL92) v3.6.1	cumedB238
Csa3G232440	Bhi01G001169	Wax gourd	cuwgoB283
Csa3G232440	CSPI03G19360	Wild cucumber (PI 183967)	cpicuB120
Csa3G232440	Cucsa.032600	Cucumber (Gy14) v1	cgycuB003
Csa3G232440	CmaCh04G005460	Cucurbita maxima (Rimu)	cmacuB697
Csa3G232440	CmaCh16G003950	Cucurbita maxima (Rimu)	cmacuB320
Csa3G232440	CmoCh04G005810	Cucurbita moschata (Rifu)	cmocuB687
Csa3G232440	CmoCh16G004280	Cucurbita moschata (Rifu)	cmocuB307
Csa3G232440	CsGy3G019250	Cucumber (Gy14) v2	cgybcuB109
Csa3G232440	Carg13192	Silver-seed gourd	carcuB0043
Csa3G232440	Carg11327	Silver-seed gourd	carcuB0675

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G232440	Watermelon (Charleston Gray)	cuwcgB230
Csa3G232440	Watermelon (97103) v1	cuwmB243
Csa3G232440	Cucurbita pepo (Zucchini)	cpecuB205
Csa3G232440	Cucurbita pepo (Zucchini)	cpecuB389
Csa3G232440	Watermelon (97103) v2	cuwmbB215