CmoCh16G004280 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCTCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTCAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCTCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTCAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA ATGGCATCATCTGGGGGGTTTTTGTTAATCTGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCTCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTCAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA
BLAST of CmoCh16G004280 vs. TrEMBL
Match: W9SMI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.5e-62 Identity = 115/140 (82.14%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TrEMBL
Match: D7T0E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00130 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.0e-62 Identity = 113/145 (77.93%), Postives = 130/145 (89.66%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TrEMBL
Match: A0A067K5H0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61 Identity = 116/142 (81.69%), Postives = 129/142 (90.85%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TrEMBL
Match: B9N1G9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41060g PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61 Identity = 115/142 (80.99%), Postives = 129/142 (90.85%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TrEMBL
Match: F6H246_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02720 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-60 Identity = 112/137 (81.75%), Postives = 126/137 (91.97%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TAIR10
Match: AT1G53035.1 (AT1G53035.1 unknown protein) HSP 1 Score: 196.8 bits (499), Expect = 9.1e-51 Identity = 91/139 (65.47%), Postives = 115/139 (82.73%), Query Frame = 1
BLAST of CmoCh16G004280 vs. TAIR10
Match: AT3G15358.1 (AT3G15358.1 unknown protein) HSP 1 Score: 192.2 bits (487), Expect = 2.2e-49 Identity = 89/139 (64.03%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of CmoCh16G004280 vs. NCBI nr
Match: gi|659112034|ref|XP_008456033.1| (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]) HSP 1 Score: 282.7 bits (722), Expect = 3.6e-73 Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 1
BLAST of CmoCh16G004280 vs. NCBI nr
Match: gi|778680327|ref|XP_011651290.1| (PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 1.5e-71 Identity = 134/143 (93.71%), Postives = 138/143 (96.50%), Query Frame = 1
BLAST of CmoCh16G004280 vs. NCBI nr
Match: gi|1009139855|ref|XP_015887338.1| (PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba]) HSP 1 Score: 252.3 bits (643), Expect = 5.2e-64 Identity = 118/143 (82.52%), Postives = 129/143 (90.21%), Query Frame = 1
BLAST of CmoCh16G004280 vs. NCBI nr
Match: gi|1000942052|ref|XP_015582414.1| (PREDICTED: uncharacterized protein LOC8273573 [Ricinus communis]) HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62 Identity = 117/143 (81.82%), Postives = 131/143 (91.61%), Query Frame = 1
BLAST of CmoCh16G004280 vs. NCBI nr
Match: gi|703162146|ref|XP_010112977.1| (hypothetical protein L484_021498 [Morus notabilis]) HSP 1 Score: 246.9 bits (629), Expect = 2.2e-62 Identity = 115/140 (82.14%), Postives = 127/140 (90.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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