Lsi05G001470 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGTCATGGCCCTGAAACAGCAATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGATAGAGAGTTCCAAAGCTTCTTTGCTAAAGGCTGCGTGTTGCTTCATCTAGCTATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCACGAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTTTTCTTTCTTGTGTATTCATGGAGAGAAAAATACGATTAACTTTAGGTTCAACTTTTCTTTCATCTGTCATTATTGTTTAAAATTATCCATTATGACTGTGCTTCTTAATTATGATGAGTTTGATGGAAATTGATATTGTTTTCACTGATTTCTGCTACCATTTTGTTTTGAGAATAGGGGGATTTGGGGACTGGGAAGTGAGATAGAAATCGAAGATCGATTTGATCAGTTTCCGTTAACCAGATTGAGCTTGAATTTGGTTTCTGTTCTGTGTCTGGATAGACAACACATTCATTTGCTCATGCTGGCTATCTTCTGCAAGATTGTGCATTTTGCCTTTCTTTATGGTTAGAATCAGAGTTCCAACTCCATGCCAAAAATGGCATTTTGGACCATGAATGTGACCCCTGGAGTAGTAACCGGGGCAAGGAGCAACTCATGGCAGGCTGCTAG ATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGTCATGGCCCTGAAACAGCAATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGATAGAGAGTTCCAAAGCTTCTTTGCTAAAGGCTGCGTGTTGCTTCATCTAGCTATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCACGAGATTGGCCTCGACAGACAACACATTCATTTGCTCATGCTGGCTATCTTCTGCAAGATTGTGCATTTTGCCTTTCTTTATGGTTAGAATCAGAGTTCCAACTCCATGCCAAAAATGGCATTTTGGACCATGAATGTGACCCCTGGAGTAGTAACCGGGGCAAGGAGCAACTCATGGCAGGCTGCTAG ATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCTTTAATGATGTTTTACTCCCACGAGGTCTATGTGTTTGGTCATGGCCCTGAAACAGCAATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAAGACATCTGATTCTTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCTTTTGTCAAAGATAGAGAGTTCCAAAGCTTCTTTGCTAAAGGCTGCGTGTTGCTTCATCTAGCTATGGCCATATGGAGAGTTTATTTCGAGAGAAAGCTTGAGGATCTCGCACGAGATTGGCCTCGACAGACAACACATTCATTTGCTCATGCTGGCTATCTTCTGCAAGATTGTGCATTTTGCCTTTCTTTATGGTTAGAATCAGAGTTCCAACTCCATGCCAAAAATGGCATTTTGGACCATGAATGTGACCCCTGGAGTAGTAACCGGGGCAAGGAGCAACTCATGGCAGGCTGCTAG MLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQTTHSFAHAGYLLQDCAFCLSLWLESEFQLHAKNGILDHECDPWSSNRGKEQLMAGC
BLAST of Lsi05G001470 vs. TrEMBL
Match: W9SMI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 1
BLAST of Lsi05G001470 vs. TrEMBL
Match: A5BT07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027197 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.1e-47 Identity = 91/110 (82.73%), Postives = 104/110 (94.55%), Query Frame = 1
BLAST of Lsi05G001470 vs. TrEMBL
Match: F6H246_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02720 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.1e-47 Identity = 91/109 (83.49%), Postives = 103/109 (94.50%), Query Frame = 1
BLAST of Lsi05G001470 vs. TrEMBL
Match: B9N1G9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41060g PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.3e-45 Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 1
BLAST of Lsi05G001470 vs. TrEMBL
Match: M5WHX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013009mg PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.3e-45 Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = 1
BLAST of Lsi05G001470 vs. TAIR10
Match: AT1G53035.1 (AT1G53035.1 unknown protein) HSP 1 Score: 150.6 bits (379), Expect = 8.5e-37 Identity = 72/118 (61.02%), Postives = 92/118 (77.97%), Query Frame = 1
BLAST of Lsi05G001470 vs. TAIR10
Match: AT3G15358.1 (AT3G15358.1 unknown protein) HSP 1 Score: 147.9 bits (372), Expect = 5.5e-36 Identity = 71/118 (60.17%), Postives = 91/118 (77.12%), Query Frame = 1
BLAST of Lsi05G001470 vs. NCBI nr
Match: gi|659112034|ref|XP_008456033.1| (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]) HSP 1 Score: 225.7 bits (574), Expect = 5.9e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Lsi05G001470 vs. NCBI nr
Match: gi|778680327|ref|XP_011651290.1| (PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 1.9e-54 Identity = 107/110 (97.27%), Postives = 108/110 (98.18%), Query Frame = 1
BLAST of Lsi05G001470 vs. NCBI nr
Match: gi|1009139855|ref|XP_015887338.1| (PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba]) HSP 1 Score: 200.3 bits (508), Expect = 2.7e-48 Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 1
BLAST of Lsi05G001470 vs. NCBI nr
Match: gi|703162146|ref|XP_010112977.1| (hypothetical protein L484_021498 [Morus notabilis]) HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 1
BLAST of Lsi05G001470 vs. NCBI nr
Match: gi|147801862|emb|CAN74977.1| (hypothetical protein VITISV_027197 [Vitis vinifera]) HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47 Identity = 91/110 (82.73%), Postives = 104/110 (94.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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