CmaCh16G003950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G003950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_91
Location	Cma_Chr16 : 1966365 .. 1966802 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCATCTGGGGGTTTTTTGTTAATATGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCTCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTGAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA

mRNA sequence

ATGGCATCATCTGGGGGTTTTTTGTTAATATGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCTCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTGAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA

Coding sequence (CDS)

ATGGCATCATCTGGGGGTTTTTTGTTAATATGTATGCTTCATTCTCTGATTGCTTTAACTTGTGGAGCGTTAATGATGTTTTACTCTCACGAGGTCTATGTGTTTGGCCATGGCCCTGAAACAGCGATCAAGCTGCAGGGATCTAGCCCCCACGATCAGCTTCTGATAAGGACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGGCATTTGTGAAAGATAGAGAGTTTCAAAGCTTCTTTGCTAAAGGATGCGTGTTGCTTCACCTTGCCATGGCCATATGGAGAGTTTATTTCGAGAGGAAGCTTGAGGATCTCGCCCAAGATTGGCCTCGACAGGTCGTTGGGGATGTTACATTGGCATTGTCATGGGTCTTCTTTCTTGTGTATTCATGGAGAGAAAAGTACGATTAA

Protein sequence

MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGDVTLALSWVFFLVYSWREKYD

Homology

[Close]

BLAST of CmaCh16G003950 vs. TrEMBL
Match: W9SMI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-63
Identity = 116/140 (82.86%), Postives = 128/140 (91.43%), Query Frame = 1


Query: 6   GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGL 65
           GF ++C+LHSL+ALTCG LMMFYS+E+Y+FGHG ETA KLQGS+PHDQLL RTSDSFSGL
Sbjct: 5   GFFVVCVLHSLVALTCGILMMFYSNELYIFGHGLETARKLQGSTPHDQLLFRTSDSFSGL 64

Query: 66  LLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGD 125
           LLF +GFLLFMVAFVKDREFQSFFAKGCVLLH+AMAIWR  FERKLEDL+ DWPRQVVGD
Sbjct: 65  LLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHIAMAIWRACFERKLEDLSSDWPRQVVGD 124

Query: 126 VTLALSWVFFLVYSWREKYD 146
           + LA SWVF LVYSWREKYD
Sbjct: 125 IALAFSWVFLLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. TrEMBL
Match: D7T0E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00130 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63
Identity = 114/145 (78.62%), Postives = 131/145 (90.34%), Query Frame = 1


Query: 1   MASSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSD 60
           M SS GF +IC+LHS+IALTCG LMMFY  E+Y FGHGPETA KL GS+PHDQLLIRTSD
Sbjct: 6   MGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRTSD 65

Query: 61  SFSGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPR 120
           SFSGLLLF +GFLLFMVAFV+DR+FQSFFAKGC++LH++MA+WR YFER++EDLA DW R
Sbjct: 66  SFSGLLLFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDWLR 125

Query: 121 QVVGDVTLALSWVFFLVYSWREKYD 146
           Q+VGD+ LALSWVFFLVYSWREKYD
Sbjct: 126 QIVGDILLALSWVFFLVYSWREKYD 150

[Close]

BLAST of CmaCh16G003950 vs. TrEMBL
Match: B9N1G9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41060g PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-62
Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 1


Query: 4   SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFS 63
           S GF LICMLHS++ALTCGALMMFY++E  VFGHG E A KL+GS+PHDQLL++TSDSFS
Sbjct: 3   SSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDSFS 62

Query: 64  GLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVV 123
           GLLLF +GFLLFMVAFVKDREFQSFFAKGCVLLH++MA WR+YFERKLEDLA+D PR VV
Sbjct: 63  GLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRLVV 122

Query: 124 GDVTLALSWVFFLVYSWREKYD 146
           GD+ LALSWVFFLVYSWREKYD
Sbjct: 123 GDIALALSWVFFLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. TrEMBL
Match: A0A067K5H0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.0e-62
Identity = 117/142 (82.39%), Postives = 130/142 (91.55%), Query Frame = 1


Query: 4   SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFS 63
           S GF LICMLHSLIALTCGALM+FY++EVYVFGHG E A KL+GS+PHDQLLI+TS+SFS
Sbjct: 3   SSGFSLICMLHSLIALTCGALMVFYTNEVYVFGHGVEVATKLKGSTPHDQLLIQTSESFS 62

Query: 64  GLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVV 123
           GLLLF +GFLLFMVAFVKDREFQSFFAKGC+LLH+++A WRVYFE  LEDLA D PRQVV
Sbjct: 63  GLLLFAIGFLLFMVAFVKDREFQSFFAKGCILLHVSVAFWRVYFEWMLEDLANDLPRQVV 122

Query: 124 GDVTLALSWVFFLVYSWREKYD 146
           GD+ LALSWVFFLVYSWREKYD
Sbjct: 123 GDIALALSWVFFLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. TrEMBL
Match: F6H246_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02720 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.8e-62
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 1


Query: 9   LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLLLF 68
           +I  LHS+IALTCGALMMFY++E++VFGHGPE A KLQGS+PHDQLLIRTSDSFSGLLLF
Sbjct: 10  IIISLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDSFSGLLLF 69

Query: 69  TVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGDVTL 128
            +GFLLFMVAFVKDREFQSFFAKGCV LH+ MA+WR+YFERKLEDLA DWP+QVVGD+ L
Sbjct: 70  AIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQVVGDIVL 129

Query: 129 ALSWVFFLVYSWREKYD 146
           ALSWVF +VYSWREKYD
Sbjct: 130 ALSWVFLVVYSWREKYD 146

[Close]

BLAST of CmaCh16G003950 vs. TAIR10
Match: AT1G53035.1 (AT1G53035.1 unknown protein)

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-52
Identity = 92/139 (66.19%), Postives = 116/139 (83.45%), Query Frame = 1


Query: 7   FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLL 66
           F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+PHD+LLI+ S SFSGLL
Sbjct: 12  FRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQSFSGLL 71

Query: 67  LFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGDV 126
           LF +G +LFMV+FVKD+EF SFFA G V+L++ MA+WRV FE K+EDLA +WP+Q +GD+
Sbjct: 72  LFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQALGDI 131

Query: 127 TLALSWVFFLVYSWREKYD 146
            LA+SWVFFLVYSWREKYD
Sbjct: 132 ALAISWVFFLVYSWREKYD 150

[Close]

BLAST of CmaCh16G003950 vs. TAIR10
Match: AT3G15358.1 (AT3G15358.1 unknown protein)

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 90/139 (64.75%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 7   FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGLL 66
           F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+PHD+ LI+ S SFSGLL
Sbjct: 6   FRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQSFSGLL 65

Query: 67  LFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGDV 126
           LF +G +LFMV+FVKDREF SFFA G V+L++ MA+WRV FE K+EDLA + P+Q +GD+
Sbjct: 66  LFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQALGDI 125

Query: 127 TLALSWVFFLVYSWREKYD 146
            LA+SWVFFLVY+WREKYD
Sbjct: 126 ALAVSWVFFLVYTWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. NCBI nr
Match: gi|659112034|ref|XP_008456033.1| (PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 3.2e-74
Identity = 138/143 (96.50%), Postives = 141/143 (98.60%), Query Frame = 1


Query: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSF 62
           +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSF
Sbjct: 2   ASSGFFLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSF 61

Query: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122
           SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLA+DWPRQV
Sbjct: 62  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLARDWPRQV 121

Query: 123 VGDVTLALSWVFFLVYSWREKYD 146
           VGDVTLALSWVFFLVYSWREKYD
Sbjct: 122 VGDVTLALSWVFFLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. NCBI nr
Match: gi|778680327|ref|XP_011651290.1| (PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.4e-72
Identity = 135/143 (94.41%), Postives = 139/143 (97.20%), Query Frame = 1


Query: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSF 62
           +S GF LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLI+TSDSF
Sbjct: 2   TSSGFCLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIKTSDSF 61

Query: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122
           SGLLLFTVG LLFMVAFV+DREFQSFFAKGCVLLHL MAIWRVYFERKLEDLA+DWPRQV
Sbjct: 62  SGLLLFTVGLLLFMVAFVRDREFQSFFAKGCVLLHLGMAIWRVYFERKLEDLARDWPRQV 121

Query: 123 VGDVTLALSWVFFLVYSWREKYD 146
           VGDVTLALSWVFFLVYSWREKYD
Sbjct: 122 VGDVTLALSWVFFLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. NCBI nr
Match: gi|1009139855|ref|XP_015887338.1| (PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba])

HSP 1 Score: 255.8 bits (652), Expect = 4.7e-65
Identity = 119/143 (83.22%), Postives = 130/143 (90.91%), Query Frame = 1


Query: 3   SSGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSF 62
           S  GF L+CMLHSL+ALTCGALMMFYS+E Y FGHG ETA KLQGS+PHDQLL+RTSDSF
Sbjct: 2   SLSGFFLVCMLHSLVALTCGALMMFYSNEFYAFGHGSETAHKLQGSTPHDQLLVRTSDSF 61

Query: 63  SGLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQV 122
           SGLLLF +G LLFMVAFVKDREFQSFFAKGC+LLH+AMA+WRVYFER LEDLA DWPRQV
Sbjct: 62  SGLLLFVIGCLLFMVAFVKDREFQSFFAKGCILLHIAMALWRVYFERNLEDLAWDWPRQV 121

Query: 123 VGDVTLALSWVFFLVYSWREKYD 146
           VGD+ LALSWV+ LVYSWREKYD
Sbjct: 122 VGDIALALSWVYLLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. NCBI nr
Match: gi|703162146|ref|XP_010112977.1| (hypothetical protein L484_021498 [Morus notabilis])

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 116/140 (82.86%), Postives = 128/140 (91.43%), Query Frame = 1


Query: 6   GFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFSGL 65
           GF ++C+LHSL+ALTCG LMMFYS+E+Y+FGHG ETA KLQGS+PHDQLL RTSDSFSGL
Sbjct: 5   GFFVVCVLHSLVALTCGILMMFYSNELYIFGHGLETARKLQGSTPHDQLLFRTSDSFSGL 64

Query: 66  LLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVVGD 125
           LLF +GFLLFMVAFVKDREFQSFFAKGCVLLH+AMAIWR  FERKLEDL+ DWPRQVVGD
Sbjct: 65  LLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHIAMAIWRACFERKLEDLSSDWPRQVVGD 124

Query: 126 VTLALSWVFFLVYSWREKYD 146
           + LA SWVF LVYSWREKYD
Sbjct: 125 IALAFSWVFLLVYSWREKYD 144

[Close]

BLAST of CmaCh16G003950 vs. NCBI nr
Match: gi|359493847|ref|XP_003634678.1| (PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera])

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63
Identity = 116/142 (81.69%), Postives = 129/142 (90.85%), Query Frame = 1


Query: 4   SGGFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPHDQLLIRTSDSFS 63
           S  F L C LHS+IALTCGALMMFY++E++VFGHGPE A KLQGS+PHDQLLIRTSDSFS
Sbjct: 3   SAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDSFS 62

Query: 64  GLLLFTVGFLLFMVAFVKDREFQSFFAKGCVLLHLAMAIWRVYFERKLEDLAQDWPRQVV 123
           GLLLF +GFLLFMVAFVKDREFQSFFAKGCV LH+ MA+WR+YFERKLEDLA DWP+QVV
Sbjct: 63  GLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQVV 122

Query: 124 GDVTLALSWVFFLVYSWREKYD 146
           GD+ LALSWVF +VYSWREKYD
Sbjct: 123 GDIVLALSWVFLVVYSWREKYD 144

The following BLAST results are available for this feature:

BLAST of CmaCh16G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
W9SMI9_9ROSA	1.0e-63	82.86	Uncharacterized protein OS=Morus notabilis GN=L484_021498 PE=4 SV=1	[more]
D7T0E2_VITVI	1.4e-63	78.62	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0265g00130 PE=4 SV=...	[more]
B9N1G9_POPTR	2.0e-62	81.69	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41060g PE=4 SV=1	[more]
A0A067K5H0_JATCU	2.0e-62	82.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20994 PE=4 SV=1	[more]
F6H246_VITVI	9.8e-62	82.48	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02720 PE=4 SV=...	[more]

BLAST of CmaCh16G003950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53035.1	8.2e-52	66.19	unknown protein	[more]
AT3G15358.1	2.0e-50	64.75	unknown protein	[more]

BLAST of CmaCh16G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112034\|ref\|XP_008456033.1\|	3.2e-74	96.50	PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]	[more]
gi\|778680327\|ref\|XP_011651290.1\|	1.4e-72	94.41	PREDICTED: uncharacterized protein LOC101222658 [Cucumis sativus]	[more]
gi\|1009139855\|ref\|XP_015887338.1\|	4.7e-65	83.22	PREDICTED: uncharacterized protein LOC107422415 [Ziziphus jujuba]	[more]
gi\|703162146\|ref\|XP_010112977.1\|	1.5e-63	82.86	hypothetical protein L484_021498 [Morus notabilis]	[more]
gi\|359493847\|ref\|XP_003634678.1\|	2.0e-63	81.69	PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006825	copper ion transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016531	copper chaperone activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G003950.1	CmaCh16G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34274	FAMILY NOT NAMED	coord: 1..145 score: 7.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G003950	Cucsa.032600	Cucumber (Gy14) v1	cgycmaB0007
CmaCh16G003950	Csa3G232440	Cucumber (Chinese Long) v2	cmacuB320
CmaCh16G003950	MELO3C019413	Melon (DHL92) v3.5.1	cmameB298
CmaCh16G003950	CSPI03G19360	Wild cucumber (PI 183967)	cmacpiB326
CmaCh16G003950	CmoCh04G005810	Cucurbita moschata (Rifu)	cmacmoB338
CmaCh16G003950	CmoCh16G004280	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G003950	Lsi05G001470	Bottle gourd (USVL1VR-Ls)	cmalsiB316
CmaCh16G003950	Cp4.1LG14g03860	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G003950	MELO3C019413.2	Melon (DHL92) v3.6.1	cmamedB346
CmaCh16G003950	CsaV3_3G019410	Cucumber (Chinese Long) v3	cmacucB0373
CmaCh16G003950	Bhi01G001169	Wax gourd	cmawgoB0438
CmaCh16G003950	CsGy3G019250	Cucumber (Gy14) v2	cgybcmaB332
CmaCh16G003950	Carg13192	Silver-seed gourd	carcmaB0053
CmaCh16G003950	Carg11327	Silver-seed gourd	carcmaB0924

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G003950	CmaCh04G005460	Cucurbita maxima (Rimu)	cmacmaB351

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G003950	Watermelon (97103) v2	cmawmbB347
CmaCh16G003950	Watermelon (Charleston Gray)	cmawcgB297
CmaCh16G003950	Watermelon (97103) v1	cmawmB317
CmaCh16G003950	Cucurbita pepo (Zucchini)	cmacpeB351