Csa2G000920 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G000920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRing finger protein 115; contains IPR011016 (Zinc finger, RING-CH-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr2 : 505352 .. 505952 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTACAAATCGATAAAAGAAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAGTTTGGTTTTGTGCTAGATTTGAATATGAAATTTGGAATTCGGCTATCATTCAATCAAAATGTGGTAAAGATTCAAAAACTCACGTTTTGAACAACTTGTGTATTCGATTCGACGATTATTAAGAGCAAACAAGTTCTGGATGTGTATATTGTTCTAACGATCTCATGACAGTAATAATAATATATGATTGTTATAAGAACTTTAT

mRNA sequence

ATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAG

Coding sequence (CDS)

ATGGCTACATCAGCTAATTATGCAGCAAGTTACATCATGGACATTGAATCAATGTTCGATCTCGACACAGTCCTCACCGGAGCCGATGACTTCTATTACTTCCACACCGTTGTAGCGCCACCACCCGTGATGGTTGCTGAATTACCGACAGTGGCTGCAGCGGACGATGTATGTGCGGTTTGTATGGAGGATTTTCTGCCGGATGAAGGCGGTAAGCAGATCCCATGTGGCCATGTGTACCATCAATCTTGCTTATCGTCTTGGCTCTCTATCCGCGACTCTTGCCCTCTCTGCCGTTGTCATATCGCCCCCGGTGACAAAACGGAGACGTCCAAAACCGTACAAGTTTAG

Protein sequence

MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV*
Homology
[Close]
BLAST of Csa2G000920 vs. Swiss-Prot
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-11
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 1 

Query: 40  PPPV---MVAELPTVAAADDV------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLS 99
           PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL 
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260

Query: 100 IRDSCPLCRCHIAPGDKTETSKTVQ 116
           + D+CP+CR  +   D T  S++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]
BLAST of Csa2G000920 vs. Swiss-Prot
Match: RN115_MOUSE (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-10
Identity = 29/83 (34.94%), Postives = 42/83 (50.60%), Query Frame = 1 

Query: 40  PPPV---MVAELPTVAAADDV------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLS 99
           PPP     +  LPTV    +       C VC ED+  +E  +Q+PC H +H SC+  WL 
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261

Query: 100 IRDSCPLCRCHIAPGDKTETSKT 114
           + D+CP+CR  +   D T  +++
Sbjct: 262 LHDTCPVCRKSLNGEDSTRQTQS 284

[Close]
BLAST of Csa2G000920 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10
Identity = 29/66 (43.94%), Postives = 36/66 (54.55%), Query Frame = 1 

Query: 48  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC 107
           LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR 
Sbjct: 199 LPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRF 258

[Close]
BLAST of Csa2G000920 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-10
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 1 

Query: 36  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIP-CGHVYHQSCLSSWLSIRDS 95
           TV+   P+ V  + T  +  + C+VC+ +F  D+ G+ +P CGHV+H  C+ +W   R S
Sbjct: 91  TVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSS 150

Query: 96  CPLCRCHIAP 105
           CPLCR  + P
Sbjct: 151 CPLCRAPVQP 160

[Close]
BLAST of Csa2G000920 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.9e-10
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1 

Query: 58  CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQ 116
           CAVCM+DF      KQ+PC H+YH+ CL  WL + +SCP+CR H  P D  +  + V+
Sbjct: 224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCR-HELPTDDPDYERRVR 280

[Close]
BLAST of Csa2G000920 vs. TrEMBL
Match: A0A0A0LEZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.2e-62
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 117
           CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]
BLAST of Csa2G000920 vs. TrEMBL
Match: A0A0A0LKR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000930 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-24
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 1 

Query: 15  IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQI 74
           IE +FDLDTVL+GADD       + P    VA+ PTV A  DVCAVC++DF PDE GKQI
Sbjct: 20  IEFLFDLDTVLSGADDLGCCQ--ITPSDSPVADFPTVVA--DVCAVCLDDFHPDEAGKQI 79

Query: 75  PCGHVYHQSCLSSWLSIRDSCPLCRCHIA--PGDKT 109
           PCGHVYH+SC+SSWL++ D CPLCRC +A  P D T
Sbjct: 80  PCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST 111

[Close]
BLAST of Csa2G000920 vs. TrEMBL
Match: D7TBH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03190 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.0e-18
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 15  IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQI 74
           I+  FDLD  +T  DD     + ++    MV+ +PTV A D  C VC E F   EGGKQ+
Sbjct: 82  IDLCFDLDLAITAVDDT----SEISKSTSMVSTMPTVTAVD-ACTVCREGFQSGEGGKQL 141

Query: 75  PCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD 107
           PCGH YH  C++SWLS+R+SCPLCRC + PG+
Sbjct: 142 PCGHFYHAGCIASWLSLRNSCPLCRCSV-PGE 167

[Close]
BLAST of Csa2G000920 vs. TrEMBL
Match: A0A067KCF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07378 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 1 

Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           +++ +N A S  + I+  FD+D  LT   +F +    V+    ++A++PTV+   D C++
Sbjct: 4   VSSDSNTAFSTCL-IDVSFDMDEALTLPPNFGH---QVSVSESLIADMPTVSTDHDTCSI 63

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIA 104
           CME F     GK++PCGHVYH +C+SSWLS  +SCPLCRC+I+
Sbjct: 64  CMESFESGRAGKRVPCGHVYHAACISSWLSNCNSCPLCRCNIS 102

[Close]
BLAST of Csa2G000920 vs. TrEMBL
Match: A0A067KPM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07310 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.8e-16
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 13  MDIESMFDLDTVLTGADDFYYFHTVVAPPPV--MVAELPTVAAADDVCAVCMEDFLPDEG 72
           M +   FDL    +G D+      + A   +  ++A +PTV+  D+VC VCME F    G
Sbjct: 19  MAVNISFDLHETPSGTDNLSRRSRITAASSINDLIAGMPTVSTNDEVCIVCMEGFRSSVG 78

Query: 73  GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPG 106
           GK+IPCGH+YH  C+SSWL   +SCPLCR +I+ G
Sbjct: 79  GKRIPCGHIYHSDCISSWLCRSNSCPLCRINISDG 113

[Close]
BLAST of Csa2G000920 vs. TAIR10
Match: AT3G02340.1 (AT3G02340.1 RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 8.7e-12
Identity = 34/103 (33.01%), Postives = 54/103 (52.43%), Query Frame = 1 

Query: 4   SANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCME 63
           S +Y A  I+    MFD +T + G        +V+   PV+   +  +   ++VCAVC +
Sbjct: 285 SGHYDADAILG--QMFDDETGIRGNPPAA--KSVIQDLPVVELAVEELDKGNNVCAVCKD 344

Query: 64  DFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD 107
           + L +E  +++PC H YH  C+  WL IR++CP+CR  +   D
Sbjct: 345 EMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDD 383

[Close]
BLAST of Csa2G000920 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11
Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 1 

Query: 38  VAPPPVM---VAELPTVAAADD------VCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSW 97
           + PPP     +  + TV   D+      VCA+C E+F   E GK++ C H+YH SC+ SW
Sbjct: 109 IGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSW 168

Query: 98  LSIRDSCPLCRCHIAPG 106
           L+I ++CP+CR  +  G
Sbjct: 169 LNIHNTCPICRFEVNLG 185

[Close]
BLAST of Csa2G000920 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 29/66 (43.94%), Postives = 36/66 (54.55%), Query Frame = 1 

Query: 48  LPTVAAADDV-------CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRC 107
           LPTV    D+       CAVCM++F      KQ+PC HV+HQ CL  WL + +SCP+CR 
Sbjct: 199 LPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRF 258

[Close]
BLAST of Csa2G000920 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11
Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 1 

Query: 36  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQIP-CGHVYHQSCLSSWLSIRDS 95
           TV+   P+ V  + T  +  + C+VC+ +F  D+ G+ +P CGHV+H  C+ +W   R S
Sbjct: 91  TVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSS 150

Query: 96  CPLCRCHIAP 105
           CPLCR  + P
Sbjct: 151 CPLCRAPVQP 160

[Close]
BLAST of Csa2G000920 vs. TAIR10
Match: AT4G26400.2 (AT4G26400.2 RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 1 

Query: 44  MVAELPTVAAADDV-CAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 103
           +V  LPTV  ++ + C++C++DF      K++PC H +H  C+  WL +  SCP+CR  +
Sbjct: 226 VVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285

Query: 104 APGDKTETS 112
            P D+T+ +
Sbjct: 286 PPDDETKVN 294

[Close]
BLAST of Csa2G000920 vs. NCBI nr
Match: gi|778673949|ref|XP_011650093.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-62
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 117
           CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]
BLAST of Csa2G000920 vs. NCBI nr
Match: gi|449466270|ref|XP_004150849.1| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 1 

Query: 15  IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQI 74
           IE +FDLDTVL+GADD       + P    VA+ PTV A  DVCAVC++DF PDE GKQI
Sbjct: 20  IEFLFDLDTVLSGADDLGCCQ--ITPSDSPVADFPTVVA--DVCAVCLDDFHPDEAGKQI 79

Query: 75  PCGHVYHQSCLSSWLSIRDSCPLCRCHIA--PGDKT 109
           PCGHVYH+SC+SSWL++ D CPLCRC +A  P D T
Sbjct: 80  PCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST 111

[Close]
BLAST of Csa2G000920 vs. NCBI nr
Match: gi|731406754|ref|XP_003633119.2| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Vitis vinifera])

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 15  IESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCMEDFLPDEGGKQI 74
           I+  FDLD  +T  DD     + ++    MV+ +PTV A D  C VC E F   EGGKQ+
Sbjct: 82  IDLCFDLDLAITAVDDT----SEISKSTSMVSTMPTVTAVD-ACTVCREGFQSGEGGKQL 141

Query: 75  PCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGD 107
           PCGH YH  C++SWLS+R+SCPLCRC + PG+
Sbjct: 142 PCGHFYHAGCIASWLSLRNSCPLCRCSV-PGE 167

[Close]
BLAST of Csa2G000920 vs. NCBI nr
Match: gi|643724606|gb|KDP33807.1| (hypothetical protein JCGZ_07378 [Jatropha curcas])

HSP 1 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 1 

Query: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60
           +++ +N A S  + I+  FD+D  LT   +F +    V+    ++A++PTV+   D C++
Sbjct: 4   VSSDSNTAFSTCL-IDVSFDMDEALTLPPNFGH---QVSVSESLIADMPTVSTDHDTCSI 63

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIA 104
           CME F     GK++PCGHVYH +C+SSWLS  +SCPLCRC+I+
Sbjct: 64  CMESFESGRAGKRVPCGHVYHAACISSWLSNCNSCPLCRCNIS 102

[Close]
BLAST of Csa2G000920 vs. NCBI nr
Match: gi|643724538|gb|KDP33739.1| (hypothetical protein JCGZ_07310 [Jatropha curcas])

HSP 1 Score: 92.4 bits (228), Expect = 5.5e-16
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 13  MDIESMFDLDTVLTGADDFYYFHTVVAPPPV--MVAELPTVAAADDVCAVCMEDFLPDEG 72
           M +   FDL    +G D+      + A   +  ++A +PTV+  D+VC VCME F    G
Sbjct: 19  MAVNISFDLHETPSGTDNLSRRSRITAASSINDLIAGMPTVSTNDEVCIVCMEGFRSSVG 78

Query: 73  GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPG 106
           GK+IPCGH+YH  C+SSWL   +SCPLCR +I+ G
Sbjct: 79  GKRIPCGHIYHSDCISSWLCRSNSCPLCRINISDG 113

The following BLAST results are available for this feature:
BLAST of Csa2G000920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN115_HUMAN7.0e-1135.29E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2[more]
RN115_MOUSE2.6e-1034.94E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1[more]
RNG1L_ARATH4.5e-1043.94E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
ATL5_ARATH4.5e-1038.57RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
RING1_GOSHI5.9e-1046.55E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
BLAST of Csa2G000920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEZ1_CUCSA1.2e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000920 PE=4 SV=1[more]
A0A0A0LKR7_CUCSA1.0e-2461.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000930 PE=4 SV=1[more]
D7TBH2_VITVI7.0e-1850.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03190 PE=4 SV=... [more]
A0A067KCF7_JATCU1.7e-1642.72Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07378 PE=4 SV=1[more]
A0A067KPM6_JATCU3.8e-1644.21Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07310 PE=4 SV=1[more]
BLAST of Csa2G000920 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02340.18.7e-1233.01 RING/U-box superfamily protein[more]
AT1G68180.11.1e-1138.96 RING/U-box superfamily protein[more]
AT3G19950.12.5e-1143.94 RING/U-box superfamily protein[more]
AT3G62690.12.5e-1138.57 AtL5[more]
AT4G26400.23.3e-1136.23 RING/U-box superfamily protein[more]
BLAST of Csa2G000920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778673949|ref|XP_011650093.1|1.7e-62100.00PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|449466270|ref|XP_004150849.1|1.4e-2461.46PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis sativus][more]
gi|731406754|ref|XP_003633119.2|1.0e-1750.00PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Vitis vinifera][more]
gi|643724606|gb|KDP33807.1|2.5e-1642.72hypothetical protein JCGZ_07378 [Jatropha curcas][more]
gi|643724538|gb|KDP33739.1|5.5e-1644.21hypothetical protein JCGZ_07310 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044267 cellular protein metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU143020cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G000920.1Csa2G000920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU143020CU143020transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 57..99
score: 5.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 58..98
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 58..99
score: 12
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 57..99
score:
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 54..101
score: 5.0
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 44..106
score: 6.9
NoneNo IPR availablePANTHERPTHR22763:SF87SUBFAMILY NOT NAMEDcoord: 44..106
score: 6.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 48..104
score: 2.83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G000920Cla016793Watermelon (97103) v1cuwmB162
Csa2G000920MELO3C004585Melon (DHL92) v3.5.1cumeB140
Csa2G000920ClCG11G002160Watermelon (Charleston Gray)cuwcgB096
Csa2G000920Lsi11G002300Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G000920MELO3C004585.2Melon (DHL92) v3.6.1cumedB133
Csa2G000920Cla97C11G208560Watermelon (97103) v2cuwmbB103
Csa2G000920BhiUN55G9Wax gourdcuwgoB173
Csa2G000920CSPI02G00870Wild cucumber (PI 183967)cpicuB065
Csa2G000920Cucsa.116610Cucumber (Gy14) v1cgycuB150
Csa2G000920CmaCh05G013660Cucurbita maxima (Rimu)cmacuB791
Csa2G000920CmaCh12G012700Cucurbita maxima (Rimu)cmacuB173
Csa2G000920CmoCh12G013030Cucurbita moschata (Rifu)cmocuB157
Csa2G000920Cp4.1LG11g11400Cucurbita pepo (Zucchini)cpecuB103
Csa2G000920Cp4.1LG07g10360Cucurbita pepo (Zucchini)cpecuB821
Csa2G000920CsGy2G000840Cucumber (Gy14) v2cgybcuB056
Csa2G000920Carg18595Silver-seed gourdcarcuB0914
Csa2G000920Carg10839Silver-seed gourdcarcuB0598
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G000920Melon (DHL92) v3.5.1cumeB110
Csa2G000920Melon (DHL92) v3.5.1cumeB129
Csa2G000920Watermelon (Charleston Gray)cuwcgB134
Csa2G000920Watermelon (Charleston Gray)cuwcgB163
Csa2G000920Watermelon (97103) v1cuwmB114
Csa2G000920Watermelon (97103) v1cuwmB119
Csa2G000920Cucurbita pepo (Zucchini)cpecuB370
Csa2G000920Cucurbita pepo (Zucchini)cpecuB662
Csa2G000920Bottle gourd (USVL1VR-Ls)culsiB134
Csa2G000920Bottle gourd (USVL1VR-Ls)culsiB139
Csa2G000920Cucumber (Gy14) v2cgybcuB019
Csa2G000920Melon (DHL92) v3.6.1cumedB106
Csa2G000920Silver-seed gourdcarcuB0042
Csa2G000920Silver-seed gourdcarcuB0102
Csa2G000920Silver-seed gourdcarcuB0217
Csa2G000920Watermelon (97103) v2cuwmbB130
Csa2G000920Watermelon (97103) v2cuwmbB156
Csa2G000920Wax gourdcuwgoB144
Csa2G000920Wax gourdcuwgoB211
Csa2G000920Cucumber (Chinese Long) v2cucuB010
Csa2G000920Cucumber (Gy14) v1cgycuB415
Csa2G000920Cucurbita maxima (Rimu)cmacuB075
Csa2G000920Cucurbita maxima (Rimu)cmacuB119
Csa2G000920Cucurbita moschata (Rifu)cmocuB065
Csa2G000920Cucurbita moschata (Rifu)cmocuB105
Csa2G000920Cucurbita moschata (Rifu)cmocuB783