CsGy5G001250 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G001250
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Tumor necrosis factor receptor superfamily member 21
Location	Chr5 : 734788 .. 739144 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAACCAAAGCGAACCGGTCTGTTCAGATCGGTTATGAACCGGTTTCCATCGCAACACAAACTGAAGTCTCACAGAAAAAACCCTGCGTGGCTAAATTCTTCTGGCTCGTAGTCGTCTCTCTCGGAACTTCAGAGCCTTGGCGGCGGCGCGCAGTAGTAGTCATTGAAGGACAGCGGTAGCGCTTTGAGTCGGGACATAGCGCGGTAGATTGGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGTAGGTTTTCCCCTCACTTTTAGTTTCTGTTACTTATCATCTTTTAATTTCTTTCATTTCGAATTCGGACGTTGTTAATAAATCGCCATTACCGAAAGTTGCTTGATCTAGGCTAGGTTAGCCCAGCAGCTACATTAGCTAAAGCCTGATATTTAGTCTCAAAATTTGATCAAACATGTTATTTTTGTTTCTTTTTCTTTTTTTTTTGTCCCCACTCTCGTTTATCGGATCGACTAGCCTAATCTGAATGTGATTTTGCTTTTGAGGTAAAGTGACTGCCATTTATGAATGTTCTTTCACTTAATATATTGAAGGCTGGTTTCCAGTATTCGGGGGGAACACAAGAATTGCATAATCGACAACACCATTAAGAAATGGCTTAAGGATATCTAGCTAATTTGGCAATCATTTTTTAAAGCAATGCTAATCATTAGTCAGGCATAGTAAAGGTTTTTGTGTATTTTGATGAAAATCTTGCAACCAAATAAGAGTTGTACTTACGCCGTTGAATGCTTACCACAACATGTAATTTCATATTGAATGGCGTTTTTTGTTGGTTTCTGGAGATGCTCAGGAGGAGCAGTGACGTTAGAATGAGTAGCCTGTTGTGACCAACCTTCCTCGATTGGCTTGGTGAAAAATACTCCAGCATTTTTCTGTCCCACAAATGTCATTAATACGGTCTCAAGGGTCCTCGTTGTTCTATTGGCACCCGTTTACTCTCTCCAACTTCCTTTACTTTCGTGGTTGGTATCACTCCTGTTGGTACTTTTCCATAAACCTTCTCGGTCTTCTCTATTAAATAGATGCTTACTATTTTCCAAATAATAACTCGGTCAATGCTAGAGATAATCAATCTGACAGGCTTTTGGGATCATACGTTTGAGACCACCCCGACCACTACCCAACAACTGATAAGTGCCTCTTTTTCTCTTTGCTCTCATCCTGTCACTGAAAATTTGTTCCCCGTTGTCCTTCATTCCCCTTTGTAGATGCTTTTCAACCTTCCAACCTTTCCTGCTCTTTCACCACCCCTGAAAAATGGACAGCAACACACCAGCCACTCCTCCCTCAATTAATCCAAAGCCCATTGTCAATCTTTTACCCCAAACCTAAGACCTGCCAATGCCTCTGTTACTCTAGCTCACAACAGTATCAACATCTCCAAACAAACAAGCTGACAACACTTTTCTTGTCTTTGTTACAAAATTCTTTAGATCTCCTTCACACTCTTGACTCAGAAAATGTTTGTATCTCTAGTCCTCTTCCTCTCTTTACTGTACCACCCTCTCCCTCACTAGAAAAGACCCCACAACTTCCTTCCTAGAAAAAATTGACTCATCCAACACAGAGATAAACACTCTTCTCCTTCTTTTCAAGGATGAAGGAAACGAAGCACCAAAGTCCCAAGGATCTCTTTCTCTAGCATCGGTTATGCATATGGTTGCACTTTGGCTTCTGAAGTATCACTGTGCCCCTCACATCCGTCAACAAGAAGTCACAGAAGCAGAACAAAATGGTCAGAAAGCTGTGGGGCCTCATATCTAATGTTAATTACTAAGCTCCCCACCTTCCACAAAAATAATTATCATCTCTTGGAATGTTAGAGAGATTGGCAATAAAATGGCACTCATTAAAAAAACTCTCCTAAATTTACAAGCTCACCATGGTTATTCTTTGAGAGATAAGTTCATTGGTGTGTGTGGGTGGGGTGGGGGTGCACTTATTATGCAAAATGATTTCCATATTCAAAGTCATGATCAATTATCAGAACGAAAAAGGAAGAGAATGATCAAATAACTTCTGCAAAAAATGAGACCCTTATTAGCACATTGGGCCTTATCTCCCCCTCCAAGATGGGCTTTTCACACGGTTAGACATGAAAAGCTCCTCCTTTTATGATCCTTATCAACAAATTTTATATGTCTGAAGGAATCCCTGAGAAGTAACTATGATGGCATGACCTTGATAAAAGGTTAAGAGATCTTGAGGTTAATCCATGATGGCCACTATCTAGGATTTAATATTCTATGAGTTTTCTTGAAACTCTGATGTTGATAGACTAGACCCTAATATTTTATGAGATAAGATGGTTTGTCTCGTGAGATTAGTCAAGATGTGCGTAAGCTGGTCCAAACACTAGCAGATACTAAAAAGGAAAAAAGATCCTCGAGAAGTTCTCCAACCTTGGGGCAGCATATTGATAGACCAATGTCGGATCATTTCTCCTTTCTTTTTTTCTGTATGATTCTCCAAATGATTCCGACCCTATTCTGTTTTGAGAACATGTGGCTCCACTACCCATAGTTTTTCCTGTTTGAATATTGGTGGAAGAACACAACCTTGGAGGCTGGGCAAGCATAGTTTCATCCTTAAACACATGAGTTGAAGGAATTTTTGAGTCAGTAATCATCATGTCTTTGGCTGGACTACCACTAAAAGGAACCAGCTATTGACTGAAATCTCCATCATTGATGGTATTGAGGAATCCGCTTGAAAGTATAGTGACCAAAATTGGACATCTGAAAGTAGATGGACTAGAATTGTACCAACTCCAAAGTTTGGACCAAAATGGTTGAACATAGTTGTTGTATATTAAAAGCTCCAATTTAATATGCCATTTTTGAAATTGGATCATTTGAATATATCTTATAGAAAACCAACGATGACTTAATCCATCCATTATGTTTGGACTTGGCAAGAAAGTCCCTGTTAAAGGAATTTGTAGTTTTTTGTAGAAATTTTCATTCATCATTCATGAAACCTATGTGCTGGTTTGAATTTTGGCCTTTCTATATCTTACTACTTTTCATGTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAGACTTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCGGGCTATCCTCCTTTGAGTTTGTAATGATGCGGGTTCAGGACGCATGGTGAATTTGTGAGTCCCTCCACCCTTTTCTTGCCCCCATTTCAGCTCATTTTGGTCACATGCAAGGTTTTTTTTTGAATATTTTACATTGACTTGTTTCCATGTAATTGACTGATAAAGCATGTATTTAAATTCATCTTCGATAAAGCATGGATCACGATGCGCTCATTGGTTGAATAGCTAGACTAAACCACTATTGATTGGCCTAATAGGAGCCATCTAAATAAAAGGCTTACAGAGTTTTAAATCATGTTGGCCATGTACTTAGACTTGAGATTCTATGGATTACTTTGGCTACCAGATGTAGTAGGGTGATGGTGACTGTCTAGTTTCAATTCAAGTGCCATCGGCTACTTTGAAATTTTATGTTTTACCGATGAAACTTCGAATATACATTAAGTATGAAATTGATCCTTTTTTCCCCTTTAAATTAAATCATCCTCAATTGCCTTTGCTAATTTTGTCATTGGCTTTCGTCGAAGAACTTCAAATCAGTCCAAACTCCCACATTGGACTAAATCAATTAGCAATCATCAAATGTAGTTTTCATTTTGTTTCCTCTTATGTACTTTGAGTATTGGATTCTTTCATTATATTAATGAATAGTCTTGTTTCCATTTAACAAATGTAATTCATCTTCGTCAATCAACCACACATCAAAAGGAATTTATGAAGTTGTAACTTGTAGTTAGAAATGAAGAAGATGATATGATTTACCAAATGTTATAAACAACAATAGTCGCCTATTTCTTTCAGTTTTGGTCTTTTA

mRNA sequence

CCAAACCAAAGCGAACCGGTCTGTTCAGATCGGTTATGAACCGGTTTCCATCGCAACACAAACTGAAGTCTCACAGAAAAAACCCTGCGTGGCTAAATTCTTCTGGCTCGTAGTCGTCTCTCTCGGAACTTCAGAGCCTTGGCGGCGGCGCGCAGTAGTAGTCATTGAAGGACAGCGGTAGCGCTTTGAGTCGGGACATAGCGCGGTAGATTGGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAGACTTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCGGGCTATCCTCCTTTGAGTTTGTAATGATGCGGGTTCAGGACGCATGGTGAATTTGTGAGTCCCTCCACCCTTTTCTTGCCCCCATTTCAGCTCATTTTGGTCACATGCAAGGTTTTTTTTTGAATATTTTACATTGACTTGTTTCCATGTAATTGACTGATAAAGCATGTATTTAAATTCATCTTCGATAAAGCATGGATCACGATGCGCTCATTGGTTGAATAGCTAGACTAAACCACTATTGATTGGCCTAATAGGAGCCATCTAAATAAAAGGCTTACAGAGTTTTAAATCATGTTGGCCATGTACTTAGACTTGAGATTCTATGGATTACTTTGGCTACCAGATGTAGTAGGGTGATGGTGACTGTCTAGTTTCAATTCAAGTGCCATCGGCTACTTTGAAATTTTATGTTTTACCGATGAAACTTCGAATATACATTAAGTATGAAATTGATCCTTTTTTCCCCTTTAAATTAAATCATCCTCAATTGCCTTTGCTAATTTTGTCATTGGCTTTCGTCGAAGAACTTCAAATCAGTCCAAACTCCCACATTGGACTAAATCAATTAGCAATCATCAAATGTAGTTTTCATTTTGTTTCCTCTTATGTACTTTGAGTATTGGATTCTTTCATTATATTAATGAATAGTCTTGTTTCCATTTAACAAATGTAATTCATCTTCGTCAATCAACCACACATCAAAAGGAATTTATGAAGTTGTAACTTGTAGTTAGAAATGAAGAAGATGATATGATTTACCAAATGTTATAAACAACAATAGTCGCCTATTTCTTTCAGTTTTGGTCTTTTA

Coding sequence (CDS)

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAG

Protein sequence

MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTPDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK

Homology

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BLAST of CsGy5G001250 vs. NCBI nr
Match: XP_004145885.1 (PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical protein Csa_5G146270 [Cucumis sativus])

HSP 1 Score: 310.1 bits (793), Expect = 4.3e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

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BLAST of CsGy5G001250 vs. NCBI nr
Match: XP_008437479.1 (PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 9.9e-78
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN DGGGG  GLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           +QQHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR+MLNLFCHYVGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKN SE+GPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

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BLAST of CsGy5G001250 vs. NCBI nr
Match: XP_022159821.1 (uncharacterized protein LOC111026127 [Momordica charantia])

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW R  QRIG+ADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           V+QHGPL+ISNAWIKAQE GV+GLNSKTHMKL+LKWMRGRKML L C+ VGSNKKFLL T
Sbjct: 61  VKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST 120

Query: 121 -PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
            PDDP+A++LK+SSE G QR+KR K P +RRK SK
Sbjct: 121 LPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

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BLAST of CsGy5G001250 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 5.8e-62
Identity = 124/153 (81.05%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 2   WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NADGGGG AGLVF+TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  QQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTP 121
           +QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           DDPRAEELK++SE   QR+K+ K+  +RRK SK
Sbjct: 123 DDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of CsGy5G001250 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 2.2e-61
Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 2   WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  QQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTP 121
           +QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 DDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           +DPRAEELK++SE   QR+K+ K+  +R+K SK
Sbjct: 123 NDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

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BLAST of CsGy5G001250 vs. TAIR10
Match: AT1G73940.1 (unknown protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGF-----AGLVFNT-------FARHFSRKRAENLRKINPKLTPQ 60
           MWF        A GGGG      A  +F+          R+ SR+RA N+RKINPK+  Q
Sbjct: 1   MWF--------AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQ 60

Query: 61  EASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCH 120
           EA  ++  LY + + HGPL++ N W++AQE+GV+GLNSKTHMKLLLKWMRG+KML L C+
Sbjct: 61  EAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICN 120

Query: 121 YVGSNKKFL-LCTPDDPRAEE----LKNSSEAGPQRKKRAK 145
            VGS+KKF     P+DP  E+    ++N  +A   +KKR+K
Sbjct: 121 QVGSSKKFFHTVLPEDPLQEQPAAPIENKKQA--VKKKRSK 151

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BLAST of CsGy5G001250 vs. TAIR10
Match: AT5G49410.1 (unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 22  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGV 81
           V     RHF+ K    ++ I     P++   + + ++ +++ HGPLTI+  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  NGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C++VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

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BLAST of CsGy5G001250 vs. TrEMBL
Match: tr|A0A0A0KK52|A0A0A0KK52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.8e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

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BLAST of CsGy5G001250 vs. TrEMBL
Match: tr|A0A1S3ATS9|A0A1S3ATS9_CUCME (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.6e-78
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN DGGGG  GLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           +QQHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR+MLNLFCHYVGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKN SE+GPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

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BLAST of CsGy5G001250 vs. TrEMBL
Match: tr|A0A2I4ESX4|A0A2I4ESX4_9ROSI (uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 94/153 (61.44%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFR     G A    G   L   TF RHFSRKRAENLRKINPK+T QEAS +AQD+Y +
Sbjct: 1   MWFRG----GGASWTSGAGMLTATTFVRHFSRKRAENLRKINPKVTRQEASSIAQDIYHL 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           ++Q+GPLT+SNAWI  QESG++GLNSKTHMKL+LKWMRGRKML LFC+ VGS+KKFLL T
Sbjct: 61  IKQNGPLTVSNAWIHVQESGISGLNSKTHMKLMLKWMRGRKMLKLFCNQVGSSKKFLLST 120

Query: 121 -PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKT 153
            P++P+ E+LK+ S+   Q +K   S   R+KT
Sbjct: 121 LPEEPQTEQLKHPSDLKLQTEK--PSVKGRKKT 147

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BLAST of CsGy5G001250 vs. TrEMBL
Match: tr|A0A2N9IE90|A0A2N9IE90_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.3e-40
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1   MWFRSI-QRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYG 60
           MWF  +  R  N        G++     RHFSRKRAEN+RKINP++TPQEAS +AQDLY 
Sbjct: 1   MWFGGLFNRSSNGTXXXXXXGII----TRHFSRKRAENVRKINPRVTPQEASTIAQDLYH 60

Query: 61  VVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLC 120
           ++ Q GPLT+SNAWI+AQESG++GL+SKTH+KL+LKWMRGRKML LFC+ +GS+KKFLL 
Sbjct: 61  LINQRGPLTVSNAWIQAQESGISGLDSKTHLKLMLKWMRGRKMLKLFCNQIGSSKKFLLS 120

Query: 121 T-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           T P++P+ E+LK+ SE   Q KK +    KRRK +K
Sbjct: 121 TLPEEPQTEQLKSPSEPKLQTKKPS---IKRRKQNK 149

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BLAST of CsGy5G001250 vs. TrEMBL
Match: tr|A0A2P5F5J9|A0A2P5F5J9_9ROSA (Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=TorRG33x02_113180 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38
Identity = 86/128 (67.19%), Postives = 108/128 (84.38%), Query Frame = 0


Query: 28  RHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSK 87
           R+FSRKRAENLRKINP++TPQEAS +A++LY V++QHGPLT+SNAW+ A++SGV+GLNSK
Sbjct: 31  RYFSRKRAENLRKINPRVTPQEASSIARNLYDVLKQHGPLTVSNAWLHAKDSGVSGLNSK 90

Query: 88  THMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSP 147
           THMKLLLKWMRGRKML L+C+ VGS+KKFLL T P+DP+AE+L+  SE   Q KK   S 
Sbjct: 91  THMKLLLKWMRGRKMLKLWCNQVGSSKKFLLSTLPEDPKAEQLRRESEVKLQTKK--PSS 150

Query: 148 TKRRKTSK 155
            K RK ++
Sbjct: 151 IKGRKQTR 156

The following BLAST results are available for this feature:

BLAST of CsGy5G001250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145885.1	4.3e-81	100.00	PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hy...	[more]
XP_008437479.1	9.9e-78	94.81	PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]	[more]
XP_022159821.1	3.4e-62	80.65	uncharacterized protein LOC111026127 [Momordica charantia]	[more]
XP_022958708.1	5.8e-62	81.05	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
XP_022996189.1	2.2e-61	80.39	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]

BLAST of CsGy5G001250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73940.1	5.0e-31	47.20	unknown protein	[more]
AT5G49410.1	1.7e-18	37.37	unknown protein	[more]

BLAST of CsGy5G001250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G001250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK52\|A0A0A0KK52_CUCSA	2.8e-81	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
tr\|A0A1S3ATS9\|A0A1S3ATS9_CUCME	6.6e-78	94.81	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]
tr\|A0A2I4ESX4\|A0A2I4ESX4_9ROSI	1.1e-40	61.44	uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 P...	[more]
tr\|A0A2N9IE90\|A0A2N9IE90_FAGSY	9.3e-40	58.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1	[more]
tr\|A0A2P5F5J9\|A0A2P5F5J9_9ROSA	5.1e-38	67.19	Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=To...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G001250.1	CsGy5G001250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	PANTHER	PTHR35110:SF2	SUBFAMILY NOT NAMED	coord: 10..151
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 10..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G001250	Cla004971	Watermelon (97103) v1	cgybwmB381
CsGy5G001250	Csa5G146270	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G001250	MELO3C005810	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G001250	ClCG01G001250	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G001250	CSPI05G04010	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G001250	CmaCh02G009630	Cucurbita maxima (Rimu)	cgybcmaB638
CsGy5G001250	CmoCh02G009700	Cucurbita moschata (Rifu)	cgybcmoB617
CsGy5G001250	Lsi09G001090	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G001250	Cp4.1LG05g07560	Cucurbita pepo (Zucchini)	cgybcpeB685
CsGy5G001250	MELO3C005810.2	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G001250	CsaV3_5G001370	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G001250	Cla97C01G001280	Watermelon (97103) v2	cgybwmbB319
CsGy5G001250	Bhi12G000038	Wax gourd	cgybwgoB413
CsGy5G001250	Carg08513	Silver-seed gourd	carcgybB0709

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G001250	Cucumber (Gy14) v2	cgybcgybB128
CsGy5G001250	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G001250	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G001250	Cucurbita pepo (Zucchini)	cgybcpeB580
CsGy5G001250	Melon (DHL92) v3.6.1	cgybmedB358
CsGy5G001250	Cucumber (Chinese Long) v3	cgybcucB230