Carg08513 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08513
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tumor necrosis factor receptor family protein
Location	Cucurbita_argyrosperma_scaffold_022 : 755670 .. 759085 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAAGAAAAACCCTGCGTGTCTAATTCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTCAGTGCCTTGGCGGCAGCGGGATACCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGTGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGTAGGTTTTCTTCACCTTCTGTTACATTTCATCGCTTATTTTCTTTCATTTCGAAGTTGGATGATGGTTATCGAAACTGCAGCTTTGGACCGCTCAAAGTTGCTTGATCTAGGTTAGCTCTGCAGCCACATTAGTTAAAGCCTGATATTGAGTCTCAATCTGAATGGGGATATGCTTTTGAGTTGAAGTGACCTGTCTTTTAGATGAATGTTCATTCACTTATTGAAGAATGCTTACCAAGTCATTCGGCTGGAGCATATAGATTACTTCATTCAAAACGTCATTAAGAAACGAATTACTAATATCTAGCTACCCAAATTAGCGACCATTTTTCAAAGCAATACTAATTATTAGTAAGGCAAATGAGAAGCTTTTGAGTATTTTTGACGAAACTCTTCTGCAACAAATAAGCTTTGTTCCCTTGAACACTTACTACCGCATGTAGTTTTATATTGAACACCCGTTTGTTGCTGTTTCCTAGAGATGCTCAGGAGGAGCAGTGGCGAGTGAAGTGGGTTAGAATGAGTAGCCCAGCGGGACCAACCATCTTGGATTGGCTCCATAAAAAATAGGTACCTTCAGCATGTGTCAATGGTACTGTCCCAAGTGTGCTTGTTGTCCTATTGACACCCCTCTGCTCACACCACCTTCCTTTACTCTCTGTAATGTATTCTTCCATTGGCACTTTTCCATAAGCCTCCTTGGTCTTCTCTTCTAGGATAGATACTTCCTATTTCCAAATTCCCTTTAGTTTCGTAATCATCTTTGTCACCACGTTAAACTCCTCCTTGATATGAACAAGTTTCATCTCAATGGTACTCTATAACTCTTATGATATTCCCTTCCACGACATCTAGATCTAGTCTTGTCTTCATTTTCTTTCATTAGTAAGCATTTCCTAGAACCACACTAATCTAGCACTACTTGTGGTTAACACCTAGAAGGGTATTTTCCTCCCAAAAGGACATCATATATGGACTCTTTTCTGCCAAGTTAATTAGTTCAAGAACACCATCAAGTACATCATGCATCCAACTTGCTAGTTTTCGTTCAATTTCTTTCTGTGCTATGTATGCATAGTAGTGGCCTATCGAAACCTTTGAAAGAGTGGAAGTATTCCCTTCAATCAAATTGAAGACATTTCAATAACGTACCAAAAGGATCTTTACTGGAGCTTTGAACTTCTTGAATATGGCGAAAGCTTTAGACTTGACTCTGACAGGATAGGCCCAGGTAAATTACCAAAGTCACAAAGCAAACGAATTAAAAAATTATAGCCTTCTTTGAAAGGGATGTGTGTAGGTCCTCAGATATCAATATGCACTATTTCGAGAGGATAAGTGGTGTATGAGAAAGAGGGAGATAAGGTTGTATTGCAGTAAGTGAAAACTTCAGACTTGACTGTGTGGGGAAAGATGTAGGTAAATGTAGCTAAGTCATCAAGGAAATGAATGAAAGACTTAATAGCTTCCTCAGAAGGAGATATGAGATAAGCGCTGGCCGCCAAATATCAGTACACTCAATTTCAAGAGGATAAGTGGACGAGTGAAACGGAGGTGAGGCAGTGTATGACACTTCCCTTCTTTTGTCAGGCATGACATGAAACAGTATCTCCTTTAACTGAACAATCAAGAAACAAGGTCATGGCTTTCAAGAAACAAGGTCATGGCTTTCTTAATTACTCTGAAAGTCGTGTCCCAATTGTAACTGTAAGTGCCGCGAGTAAAATTGGATATATTCAAAGACAAACCAACAACTAATATCAACAATAGAAGTGTAACAAGCTCAAGTCCACCGGTAGTAGATATTGTCCGCTTTGTCCCGTTATGTATTGCCGTCAGCCTCACGGTTCTAAAACACGTCTGTTAGGGAGAGGTTTCTACACCCTTATAAAGAATGCTTCGTTTCCCTCCCCAACGGATGTGGGATCTCACAATCCACCCGCCTTCGAGGCCCAGCGTCCTCGTTGGCAATTGTTCGGTGGCTAGCTCTGAAACCTTTTGTAATAGTCCAAACCCACTGCTAGTAGATATTGTCCGCTTTGGCCCATTACGTATCGCCGTCAGCTTCACGGTTTTAAAACATGTCCACTAGGGAGAGGTTTCCACACTCTTAGAGGCCCAGCATTAGAGTTAGACAGCGGTTGGTGTGCCAACGAGAGATACAAATTTCACACGAGAGTGAAAAAAGTACAAAACGGATAATTAAAAAAATTACTTAAACATGCCCCAACGTCGAACAAAGAACATAGTTGTTGTGTATAAAAAGTTCCAATAGAATTCTTACTTTTGAAATTGGATCATTTGGAATATATCTTATAGAAGCCAATGATGACTTAATCCATCATGTCTGTGACATGGGAAGGCCGTAGGAATATTTATTACATGTAGAAATTGTGCACTCAGCCCTCGTGAAAAGCAGTGAATTGAATTGAATTTTATGGCCCTTCTATCTAATACTGCTTTTCATATCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAAACTTTTGCCAACGTCCACGAGTTTACGATGCAGTCGATGGGACTGCCCTCGGACTTGTTAGTACTGATGGCGCGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACCGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATCGACTGACAAACATGCATTTGAATCGTGGTTGATAAAACAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCAGAATAAAAATCTTGAATTTTT

mRNA sequence

ATGAGTAAAGAAAAACCCTGCGTGTCTAATTCTGTTCGTTCGTCGTCGACTCTCTTCGAATCTCAGTGCCTTGGCGGCAGCGGGATACCAGTGCAACAGCGCGCAGTTGTAGCCATAGACGAATAGTGGGAGAATTTTGTACCACGAAGTAGTGCGGTAGACTAGCATCAGATATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAAACTTTTGCCAACGTCCACGAGTTTACGATGCAGTCGATGGGACTGCCCTCGGACTTGTTAGTACTGATGGCGCGCTCACGACTTATGACGATGAATTTATGAGTTTCTGCCATCACCGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGGTTTCCATGCATCGACTGACAAACATGCATTTGAATCGTGGTTGATAAAACAGCATGGATTAGGATGTCTCATTGGATTAAACAATTTAAGTCAGAATAAAAATCTTGAATTTTT

Coding sequence (CDS)

ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGAGAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAAGTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGTAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACAAATAAGGAGGAGAAAGGCATCAAAATAA

Protein sequence

MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK

Homology

[Close]

BLAST of Carg08513 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TPNDPR EELKSASEPVVQRRKKQKA+IRR+KASK
Sbjct: 121 TPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of Carg08513 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 2.6e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60
           MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYG
Sbjct: 1   MWWLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYG 60

Query: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120
           VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA
Sbjct: 61  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLA 120

Query: 121 TPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           TP+DPR EELKSASEPVVQRRKKQKAQIRRRKASK
Sbjct: 121 TPDDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

[Close]

BLAST of Carg08513 vs. NCBI nr
Match: XP_023534502.1 (uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 1.3e-72
Identity = 146/157 (92.99%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MWWLRGIQTIRNADG--GGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDL 60
           MWWLRGIQTIRNADG       GLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDL
Sbjct: 1   MWWLRGIQTIRNADGXXXXXXXGLVFSTFARYFSRSRAENLRKINPKLTPHEASLVAQDL 60

Query: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120
           YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL
Sbjct: 61  YGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL 120

Query: 121 LATPNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           LATP+DPR EELKSASEPVVQRRKKQKAQIRRRK SK
Sbjct: 121 LATPDDPRAEELKSASEPVVQRRKKQKAQIRRRKTSK 157

[Close]

BLAST of Carg08513 vs. NCBI nr
Match: XP_004145885.1 (PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical protein Csa_5G146270 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 2   WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122
           +QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL TP
Sbjct: 62  QQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTP 121

Query: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           +DPR EELK++SE   QR+K+ K+  +RRK SK
Sbjct: 122 DDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Carg08513 vs. NCBI nr
Match: XP_022159821.1 (uncharacterized protein LOC111026127 [Momordica charantia])

HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61
Identity = 125/154 (81.17%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           WLRG Q I +ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 2   WLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT- 122
           KQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRKML+L CNQVGSNKKFLL+T 
Sbjct: 62  KQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLSTL 121

Query: 123 PNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           P+DP+ ++LKS+SE  VQR K+ K   RRRK SK
Sbjct: 122 PDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

[Close]

BLAST of Carg08513 vs. TAIR10
Match: AT1G73940.1 (unknown protein)

HSP 1 Score: 137.1 bits (344), Expect = 9.1e-33
Identity = 77/148 (52.03%), Postives = 96/148 (64.86%), Query Frame = 0


Query: 13  ADGGGG-----SAGLVF-------STFARYFSRSRAENLRKINPKLTPQEASLVAQDLYG 72
           A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY 
Sbjct: 4   AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQEAYAISNSLYD 63

Query: 73  VVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFL-L 132
           + K HGPL+V N W++AQE+GV GLNSKTHMKLLLKWMRG+KML+L CNQVGS+KKF   
Sbjct: 64  LFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICNQVGSSKKFFHT 123

Query: 133 ATPNDPRVEELKSASEPVVQRRKKQKAQ 148
             P DP  E+  +  E   Q  KK++++
Sbjct: 124 VLPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of Carg08513 vs. TAIR10
Match: AT5G49410.1 (unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 6.3e-18
Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 23  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 82
           V     R+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 83  GGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT 122
            GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of Carg08513 vs. TrEMBL
Match: tr|A0A0A0KK52|A0A0A0KK52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.7e-62
Identity = 123/153 (80.39%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 2   WFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122
           +QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC+ VGSNKKFLL TP
Sbjct: 62  QQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCTP 121

Query: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           +DPR EELK++SE   QR+K+ K+  +RRK SK
Sbjct: 122 DDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Carg08513 vs. TrEMBL
Match: tr|A0A1S3ATS9|A0A1S3ATS9_CUCME (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.8e-60
Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W R IQ I N DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV+
Sbjct: 2   WFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVI 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122
           +QHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGR+ML LFC+ VGSNKKFLL TP
Sbjct: 62  QQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCTP 121

Query: 123 NDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           +DPR EELK+ SE   QR+K+ K+  +RRK SK
Sbjct: 122 DDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Carg08513 vs. TrEMBL
Match: tr|A0A2N9IE90|A0A2N9IE90_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.5e-41
Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 0


Query: 12  NADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVS 71
           N    G           R+FSR RAEN+RKINP++TPQEAS +AQDLY ++ Q GPLTVS
Sbjct: 8   NRSSNGTXXXXXXGIITRHFSRKRAENVRKINPRVTPQEASTIAQDLYHLINQRGPLTVS 67

Query: 72  NAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT-PNDPRVEEL 131
           NAWI+AQESG+ GL+SKTH+KL+LKWMRGRKML+LFCNQ+GS+KKFLL+T P +P+ E+L
Sbjct: 68  NAWIQAQESGISGLDSKTHLKLMLKWMRGRKMLKLFCNQIGSSKKFLLSTLPEEPQTEQL 127

Query: 132 KSASEPVVQRRKKQKAQIRRRKASK 156
           KS SEP +Q +   K  I+RRK +K
Sbjct: 128 KSPSEPKLQTK---KPSIKRRKQNK 149

[Close]

BLAST of Carg08513 vs. TrEMBL
Match: tr|A0A2I4ESX4|A0A2I4ESX4_9ROSI (uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 92/154 (59.74%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62
           W RG      A    G+  L  +TF R+FSR RAENLRKINPK+T QEAS +AQD+Y ++
Sbjct: 2   WFRG----GGASWTSGAGMLTATTFVRHFSRKRAENLRKINPKVTRQEASSIAQDIYHLI 61

Query: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT- 122
           KQ+GPLTVSNAWI  QESG+ GLNSKTHMKL+LKWMRGRKML+LFCNQVGS+KKFLL+T 
Sbjct: 62  KQNGPLTVSNAWIHVQESGISGLNSKTHMKLMLKWMRGRKMLKLFCNQVGSSKKFLLSTL 121

Query: 123 PNDPRVEELKSASEPVVQRRKKQKAQIRRRKASK 156
           P +P+ E+LK  S+  +Q    +K  ++ RK ++
Sbjct: 122 PEEPQTEQLKHPSDLKLQ---TEKPSVKGRKKTR 148

[Close]

BLAST of Carg08513 vs. TrEMBL
Match: tr|A0A2P5F5J9|A0A2P5F5J9_9ROSA (Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=TorRG33x02_113180 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39
Identity = 87/132 (65.91%), Postives = 111/132 (84.09%), Query Frame = 0


Query: 25  STFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGG 84
           +   RYFSR RAENLRKINP++TPQEAS +A++LY V+KQHGPLTVSNAW+ A++SGV G
Sbjct: 27  TALVRYFSRKRAENLRKINPRVTPQEASSIARNLYDVLKQHGPLTVSNAWLHAKDSGVSG 86

Query: 85  LNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT-PNDPRVEELKSASEPVVQRRKK 144
           LNSKTHMKLLLKWMRGRKML+L+CNQVGS+KKFLL+T P DP+ E+L+  SE  V+ + K
Sbjct: 87  LNSKTHMKLLLKWMRGRKMLKLWCNQVGSSKKFLLSTLPEDPKAEQLRRESE--VKLQTK 146

Query: 145 QKAQIRRRKASK 156
           + + I+ RK ++
Sbjct: 147 KPSSIKGRKQTR 156

The following BLAST results are available for this feature:

BLAST of Carg08513 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996189.1	1.5e-78	98.06	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]
XP_022958708.1	2.6e-78	98.06	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
XP_023534502.1	1.3e-72	92.99	uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]	[more]
XP_004145885.1	1.3e-61	80.39	PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hy...	[more]
XP_022159821.1	2.9e-61	81.17	uncharacterized protein LOC111026127 [Momordica charantia]	[more]

BLAST of Carg08513 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73940.1	9.1e-33	52.03	unknown protein	[more]
AT5G49410.1	6.3e-18	36.36	unknown protein	[more]

BLAST of Carg08513 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08513 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK52\|A0A0A0KK52_CUCSA	8.7e-62	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
tr\|A0A1S3ATS9\|A0A1S3ATS9_CUCME	4.8e-60	78.43	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]
tr\|A0A2N9IE90\|A0A2N9IE90_FAGSY	6.5e-41	61.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1	[more]
tr\|A0A2I4ESX4\|A0A2I4ESX4_9ROSI	2.5e-40	59.74	uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 P...	[more]
tr\|A0A2P5F5J9\|A0A2P5F5J9_9ROSA	2.7e-39	65.91	Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=To...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08513-RA	Carg08513-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	PANTHER	PTHR35110:SF2	SUBFAMILY NOT NAMED	coord: 15..153
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 15..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08513	Cla004971	Watermelon (97103) v1	carwmB0709
Carg08513	Csa5G146270	Cucumber (Chinese Long) v2	carcuB0731
Carg08513	MELO3C005810	Melon (DHL92) v3.5.1	carmeB0706
Carg08513	ClCG01G001250	Watermelon (Charleston Gray)	carwcgB0686
Carg08513	CSPI05G04010	Wild cucumber (PI 183967)	carcpiB0747
Carg08513	Cucsa.193260	Cucumber (Gy14) v1	carcgyB0798
Carg08513	CmaCh02G009630	Cucurbita maxima (Rimu)	carcmaB0999
Carg08513	CmoCh02G009700	Cucurbita moschata (Rifu)	carcmoB0971
Carg08513	Lsi09G001090	Bottle gourd (USVL1VR-Ls)	carlsiB646
Carg08513	Cp4.1LG05g07560	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08513	CsGy5G001250	Cucumber (Gy14) v2	carcgybB0709
Carg08513	MELO3C005810.2	Melon (DHL92) v3.6.1	carmedB0719
Carg08513	CsaV3_5G001370	Cucumber (Chinese Long) v3	carcucB0750
Carg08513	Cla97C01G001280	Watermelon (97103) v2	carwmbB0739
Carg08513	Bhi12G000038	Wax gourd	carwgoB0830

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08513	Cucurbita maxima (Rimu)	carcmaB0993
Carg08513	Cucurbita moschata (Rifu)	carcmoB0965
Carg08513	Cucurbita pepo (Zucchini)	carcpeB0993