CSPI05G04010 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G04010
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Tumor necrosis factor receptor superfamily member 21
Location	Chr5 : 4018413 .. 4022429 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGCAACACAAACTGAAGTCTCACAGAAAAAACCCTGCGTGGCTAAATTCTTCTGGCTCGTAGTCGTCTCTCTCGGAACTTCAGAGCCTTGGCGGCGGCGCGCAGTAGTAGTTATTGAAGGACAGCGGTAGCGCTTTGAGTCGGGACATAGCGCGGTAGATTGGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGTAGGTTTTCCCCTCACTTTTAGTTTCTGTTACTTATCATCTTTTAATTTCTTTCATTTCGATTTCGGACGTTGTTAATAAATCGCAATTACCGAAAGTTGCTTGATCTAGGCTAGGTTAGCCCAGCAGCTACATTAGCTAAAGCCTGATATTTAGTCTCAAAATTTGATCAAACATGTTATTTTTGTTTCTTTTTCTTTTTTTTTGTCCCCACTCTCGTTTATCGGATCGACTAGCCTAATCTGAATGTGATTTTGCTTTTGAGGTAAAGTGACTGCCATTTATGAATGTTCTTTCACTTAATATATTGAAGGCTGGTTTCCAGTATTCGGGGGGAACACAAGAATTGCATAATCGACAACACCATTAAGAAATGGCTTAAGGATATCTAGCTAATTTGGCAATCATTTTTTAAAGCAATGCTAATCATTAGTCAGGCATAGTAAAGGTTTTTGTGTATTTTGATGAAAATCTTGCAACCAAATAAGAGTTATACTTAAGCCGTTGAATGCTTACCACAACATGTAATTTCATATTGAATGGCGTTTTTTGTTGGTTCCTAGAGATGCTCAGGAGGAGCAGTGACGTTAGAATGAGTAGCCTGTTGTGACCAACCTTCCTCGATTGGCTTGGTGAAAAATACTCCAGCATTTTTCTGTCCCACAAATGTCATTACTACGGTCTCAAGTGTCCTCGTTGTTCCATTGGCACCCTTTTACTCTCTCCAACTTCCTTTACTTTCGTGGTCGGTATCACTCCTGTTGGTACTTTTCCATAAACCTTCTCGGTCTTCTCTATTAAATAGATGCTTACTATTTTCCAAATAATAACTCGGTCAATGCTAGAGATAATCAGATGCTTACTATTTTCCAAATAATAACTCGGTCAATGCTAGAGATAATCAATCTGACAGGCTTTTGGGATCATACGTTTGAGACCACCCTGACCACTACCCAACAACTGATAAGTGCCTCTTTTTCTCTTTGCTCTCGTCCTGTCACTGAAAATTTGTTCCCCGTTGTCCTTCATTCCCCTTTGTAGATGCTTTTCAACCTTCCAACCTTTCCTGCTCTTTCACCACCCCTGAAAAATGGACAGCAACACACCAGCCACTCCTCCCTCAATTAATCCAAAGCCCATTGTCAATCTTTTACCCCAAACCTAAGACCTGCCAATGCCTCTGTTACTCTAGCTCACAACAGTATCAACATCTCCAAACAAACAAGCTGACAACACTTTTCTTGTCTTTGTTACAAAATTCTTTAGATCTCCTTCACACTCTTGACTCAGAAAATGTTTGTATCTCTAGTCCTCTTCCTCTCTTTACTGTACCACCCTCTCCCTCACTAGAAAAGACCCCACAACTTCCTTCCTAGAAAAAATTGACTCATCCAACACAGAGATAAACACTCTTCTCCTTCTTTTCAAGGATGAAGGAAACGAAGCACCAAAGTCCCAAGGATCTCTTTCTCTAGCATCGGTTATGCATATGGTTGCACTTTCGCTTCTGAAGTATCACTGTGCCCCTCACATCCGTCAACAAGAAGTCACAGAAGCAGAACAAAATGGTCAGAAAGCTGTGGGGCCTCATATCTAATGTTAATTACTAAGCTCCCCACCTTCCACAAAAATAATTATCATCTCTTGGAATGTTAGAGAGATTGGCAATAAAATGGCACTCATTAAAAAAACTCTCCTAAATTTACAAGCTCACCATGGTTATTCTTTGAGAGATAAGTTCATTGGTGTGTGTGGGTGGGGTGGGGGTGCACTTATTATGCAAAATGATTTCCATATTCAAAGTCATGATCAATTATCAGAACAAAAAAGGAAGAGAATGATCAAATAACTTCTGCAAAAAATGAGACCCTTATTAGCACATTGGGCCTTATCTCCCCCTCCAAGATGGGCTTTTCACACGGTTAGACATGAAAAGCTCCTACTTTTATGACCCTTATCAACAAATTTTATATGTCTGAAGGAATCCCTGAGAAGTAACTATGATGGCATGACCTTGATAAAAGGTTAAGAGATCTTGAGGTTAATCCATGATGGCCACTATCTAGGATTTAATATTCTATGAGTTTTCTTGAGACTCTGATGTTGATAGACTAGACCCTAATATTTTATGAGATAAGATGGTTTGTCTCGTAAGATTAGTCAAGATGTGCGTAAGCTGGTCCAAACACTAGCAGATACTAAAAAGGAAAAAAGATCCTCGAGAAGTCCTCCAACCTTGGGGCAGCATATTGATAGACCAATGTCGGATCATTTCTCCTTTCTTTTTTTCTGTAGGATTCTCCAAATGATTCCGACCCTATTCTATTTTGAGAACATGTGGCTCCACTACCCATAGTTTTTCCTGTTTGAATATTGGTGGAAGAACACAACCTTGGAGGCTGGGCAAGCATAGTTTCATCCTTAAACACATGAGTTGAAGGAATTTTTGAGTCAGTAATCATCATGTCTTTGGCTGGATTACCACTAAAAGGAACCAGCTATTGACTGAAATCTCCATCATTGATGGTATTGAGGAATCCGCTTGAAAGTATAGTGACCAAAATTGGACATCTGAAAGTAGATGGACTAGAATTGTACCAACTCCAAAGTTTGGACCAAAATGGTTGAACATAGTTGTTGTATATTAAAAGCTCCAATTTAATATGCCATTTTTGAAATTGGATCATTTGAATATATCTTATAGAAAACCAACGATGACTTAATCCATCCATTATGTTTGGACTTGGCAAGTAAGTCCCTGTTAAAGGAATTTGTAGTTTTTTGTAGAAAATTTTCATTCATCATTCATGAAACCTATGTGCTGGTTTGAATTTTGGCCTTTCTATATCTTACTACTTTTCATGTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAGACTTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCTGGCTATCCTCCTTTGAGTTTGTAATGATGCGGGTTCAGGACGCATGGTGAATTTGTGAGTCCCTCCACCCTTTTCTTGCCCCCATTTCAGCTCATTTTGGTCACATGCAAGGTTTTTTTTTGAATATTTTACATTGACTTGTTTCCATGTAATTGACTGATAAAGCATGTATTTAAATTCATCTTCGATAAAGCATGGATCACGATGCGCTCATTGGTTGAATAGCTAGACTAAACCACTATTGATTGGCCTAATAGGAGCCATCTAAATAAAAGGCTTACAGAGTTTTAAATCATGTTGGCCATGTACTTTGACTTGAGATTCTATGGATTACTTTGGCTACCAGATGTAGTAGGGTGATGGTGACTGTCTAGTTTAGTTTCAATTCAAGTGCCATCGGCTACTTTGAAATTTTATGTTTTACCGATGAAACTTCGAATATACATTAAGTATGAAATTGATCCTTTTTTCCC

mRNA sequence

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAG

Coding sequence (CDS)

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTTTGCTGGCCTCGTGTTCAACACATTTGCGAGGCATTTCTCGAGGAAGCGAGCAGAAAATCTTAGGAAGATTAATCCCAAGTTGACTCCTCAGGAAGCTTCGTTGGTTGCTCAAGATCTCTATGGTGTTGTCCAGCAGCACGGCCCTCTCACCATTTCCAATGCTTGGATTAAAGCTCAGGAATCTGGCGTGAATGGATTGAACAGCAAAACACACATGAAGCTACTGCTGAAATGGATGAGGGGAAGGAAGATGCTGAACCTTTTCTGCCACTACGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGATGATCCTCGGGCAGAAGAGTTGAAGAATTCTTCAGAAGCGGGACCCCAGAGAAAGAAGAGAGCGAAGTCACCAACAAAGAGAAGAAAGACATCAAAATAG

Homology

[Close]

BLAST of CSPI05G04010 vs. TrEMBL
Match: A0A0A0KK52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.0e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of CSPI05G04010 vs. TrEMBL
Match: D7TVV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03090 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWF          GGGG  G+    F R+FSRK A N+RKINPK+  QEAS +AQ LY V
Sbjct: 1   MWF--------GGGGGGGRGVAAGLFVRYFSRKCAVNVRKINPKVPYQEASSIAQSLYQV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           ++Q+G L+ISN WI+A+E+G++GLNSKTHMK++LKWMRGRKML LFC++VGS+KKFL CT
Sbjct: 61  IKQNGALSISNTWIQAKEAGISGLNSKTHMKIMLKWMRGRKMLKLFCNHVGSSKKFLHCT 120

Query: 121 -PDDPRAEELKNSSEAGPQRKKRAKSPTKRRK 152
            P+DP   +L++S E  PQ KKR+   TKR+K
Sbjct: 121 LPEDPEVAQLRSSLEHKPQTKKRS---TKRKK 141

[Close]

BLAST of CSPI05G04010 vs. TrEMBL
Match: M5WNS2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012869mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.9e-37
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGF-------AGLVFNT--FARHFSRKRAENLRKINPKLTPQEAS 60
           MWF          GGG F       +GL+ +   F RHFSRKRAENLRKINPK++  EA+
Sbjct: 1   MWF----------GGGAFRASTSTGSGLITSATAFVRHFSRKRAENLRKINPKVSFPEAN 60

Query: 61  LVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVG 120
            +A+DLY VV+QHGPLTISN W++A++SG++GLNSKTHMK++LKWMRGRKML LF + VG
Sbjct: 61  SIARDLYDVVKQHGPLTISNTWVQAKDSGLSGLNSKTHMKIMLKWMRGRKMLKLFPNQVG 120

Query: 121 SNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           S KKFLLC+ P+DP   E + SS    Q +K    P+ +RK  K
Sbjct: 121 STKKFLLCSLPEDPEVTEFRTSSAVKVQNRK----PSVKRKKQK 150

[Close]

BLAST of CSPI05G04010 vs. TrEMBL
Match: A0A067K078_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20340 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.5e-36
Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 1


Query: 14  GGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAW 73
           GGGG  G + ++  R+FSR RA N+RKINPK+   EA+ ++Q LY +++QHGPLT+SN W
Sbjct: 6   GGGGNVGTIRSSLVRYFSRARAVNVRKINPKVPFPEAAYISQSLYSIIKQHGPLTVSNTW 65

Query: 74  IKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNS 133
             A+ES ++GLNSKTHMK+LLKWMRGRKML LFC  VGS+KKFL CT P++P+ +++K  
Sbjct: 66  NHAKESNISGLNSKTHMKILLKWMRGRKMLKLFCSNVGSSKKFLHCTLPEEPQTDQMKEL 125

Query: 134 SEAGPQRKKRAKSPTKRRKTSK 155
           SE   Q  K  K+ TKR+K  K
Sbjct: 126 SELNLQTDK--KTSTKRKKKQK 145

[Close]

BLAST of CSPI05G04010 vs. TrEMBL
Match: W9SGY8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011827 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.1e-34
Identity = 82/154 (53.25%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 9   IGNADGGG-----GFAGLVFNTFARHFSR---KRAENLRKINPKLTPQEASLVAQDLYGV 68
           +G A  GG      F+      + R+FSR   KRAEN+RKINP+++PQEAS +A+ LY V
Sbjct: 9   VGGASNGGVASSSSFSKATAMAWVRYFSRDGRKRAENVRKINPRVSPQEASSIARGLYDV 68

Query: 69  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 128
           V+QHGPLTISNAW+ A++SGV+GLNSKTHMKL+LKWMRGRKM+ L C++VGS KKFLL T
Sbjct: 69  VKQHGPLTISNAWLLAKDSGVSGLNSKTHMKLMLKWMRGRKMVKLLCNHVGSTKKFLLST 128

Query: 129 PDDPRAEELKNSSEAGPQRKK---RAKSPTKRRK 152
             +      K+ +EA P   K   + K P+++ K
Sbjct: 129 KTEAEPSNNKDKAEAEPSNNKLKLQTKKPSQKGK 162

[Close]

BLAST of CSPI05G04010 vs. TAIR10
Match: AT1G73940.1 (AT1G73940.1 unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-31
Identity = 76/161 (47.20%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGF-----AGLVFNT-------FARHFSRKRAENLRKINPKLTPQ 60
           MWF        A GGGG      A  +F+          R+ SR+RA N+RKINPK+  Q
Sbjct: 1   MWF--------AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQ 60

Query: 61  EASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCH 120
           EA  ++  LY + + HGPL++ N W++AQE+GV+GLNSKTHMKLLLKWMRG+KML L C+
Sbjct: 61  EAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICN 120

Query: 121 YVGSNKKFL-LCTPDDPRAEE----LKNSSEAGPQRKKRAK 145
            VGS+KKF     P+DP  E+    ++N  +A   +KKR+K
Sbjct: 121 QVGSSKKFFHTVLPEDPLQEQPAAPIENKKQA--VKKKRSK 151

[Close]

BLAST of CSPI05G04010 vs. TAIR10
Match: AT5G49410.1 (AT5G49410.1 unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 1


Query: 22  VFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGV 81
           V     RHF+ K    ++ I     P++   + + ++ +++ HGPLTI+  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  NGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C++VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of CSPI05G04010 vs. NCBI nr
Match: gi|449456295|ref|XP_004145885.1| (PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.0e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of CSPI05G04010 vs. NCBI nr
Match: gi|659074209|ref|XP_008437479.1| (PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 2.3e-78
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN DGGGG  GLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           +QQHGPLT+SNAWIKAQESGVNGLNSKTHMKLLLKWMRGR+MLNLFCHYVGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           PDDPRAEELKN SE+GPQRKKRAKSPTKRRKTSK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of CSPI05G04010 vs. NCBI nr
Match: gi|225426494|ref|XP_002277461.1| (PREDICTED: uncharacterized protein LOC100253102 [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-38
Identity = 88/152 (57.89%), Postives = 113/152 (74.34%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWF          GGGG  G+    F R+FSRK A N+RKINPK+  QEAS +AQ LY V
Sbjct: 1   MWF--------GGGGGGGRGVAAGLFVRYFSRKCAVNVRKINPKVPYQEASSIAQSLYQV 60

Query: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120
           ++Q+G L+ISN WI+A+E+G++GLNSKTHMK++LKWMRGRKML LFC++VGS+KKFL CT
Sbjct: 61  IKQNGALSISNTWIQAKEAGISGLNSKTHMKIMLKWMRGRKMLKLFCNHVGSSKKFLHCT 120

Query: 121 -PDDPRAEELKNSSEAGPQRKKRAKSPTKRRK 152
            P+DP   +L++S E  PQ KKR+   TKR+K
Sbjct: 121 LPEDPEVAQLRSSLEHKPQTKKRS---TKRKK 141

[Close]

BLAST of CSPI05G04010 vs. NCBI nr
Match: gi|595849490|ref|XP_007209734.1| (hypothetical protein PRUPE_ppa012869mg [Prunus persica])

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 1


Query: 1   MWFRSIQRIGNADGGGGF-------AGLVFNT--FARHFSRKRAENLRKINPKLTPQEAS 60
           MWF          GGG F       +GL+ +   F RHFSRKRAENLRKINPK++  EA+
Sbjct: 1   MWF----------GGGAFRASTSTGSGLITSATAFVRHFSRKRAENLRKINPKVSFPEAN 60

Query: 61  LVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVG 120
            +A+DLY VV+QHGPLTISN W++A++SG++GLNSKTHMK++LKWMRGRKML LF + VG
Sbjct: 61  SIARDLYDVVKQHGPLTISNTWVQAKDSGLSGLNSKTHMKIMLKWMRGRKMLKLFPNQVG 120

Query: 121 SNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 155
           S KKFLLC+ P+DP   E + SS    Q +K    P+ +RK  K
Sbjct: 121 STKKFLLCSLPEDPEVTEFRTSSAVKVQNRK----PSVKRKKQK 150

[Close]

BLAST of CSPI05G04010 vs. NCBI nr
Match: gi|645267932|ref|XP_008239302.1| (PREDICTED: uncharacterized protein LOC103337910, partial [Prunus mume])

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-36
Identity = 81/130 (62.31%), Postives = 103/130 (79.23%), Query Frame = 1


Query: 26  FARHFSRKRAENLRKINPKLTPQEASLVAQDLYGVVQQHGPLTISNAWIKAQESGVNGLN 85
           F RHFSRKRAENLRKINPK++  EA+ +A+DLY VV+QHGPLTISN W++A++SG++GLN
Sbjct: 8   FVRHFSRKRAENLRKINPKVSFPEANSIARDLYDVVKQHGPLTISNTWVQAKDSGLSGLN 67

Query: 86  SKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT-PDDPRAEELKNSSEAGPQRKKRAK 145
           SKTHMK++LKWMRGRKML LF + VGS KKFLLC+ P+DP+  E + SS    Q +K   
Sbjct: 68  SKTHMKIMLKWMRGRKMLKLFPNQVGSTKKFLLCSLPEDPKVTEFRTSSAVKVQNRK--- 127

Query: 146 SPTKRRKTSK 155
            P+ +RK  K
Sbjct: 128 -PSVKRKKQK 133

The following BLAST results are available for this feature:

BLAST of CSPI05G04010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G04010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK52_CUCSA	7.0e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146270 PE=4 SV=1	[more]
D7TVV8_VITVI	1.2e-38	57.89	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03090 PE=4 SV=...	[more]
M5WNS2_PRUPE	8.9e-37	54.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012869mg PE=4 SV=1	[more]
A0A067K078_JATCU	7.5e-36	56.34	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20340 PE=4 SV=1	[more]
W9SGY8_9ROSA	4.1e-34	53.25	Uncharacterized protein OS=Morus notabilis GN=L484_011827 PE=4 SV=1	[more]

BLAST of CSPI05G04010 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73940.1	3.8e-31	47.20	unknown protein	[more]
AT5G49410.1	1.7e-18	37.37	unknown protein	[more]

BLAST of CSPI05G04010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456295\|ref\|XP_004145885.1\|	1.0e-81	100.00	PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus]	[more]
gi\|659074209\|ref\|XP_008437479.1\|	2.3e-78	94.81	PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]	[more]
gi\|225426494\|ref\|XP_002277461.1\|	1.8e-38	57.89	PREDICTED: uncharacterized protein LOC100253102 [Vitis vinifera]	[more]
gi\|595849490\|ref\|XP_007209734.1\|	1.3e-36	54.88	hypothetical protein PRUPE_ppa012869mg [Prunus persica]	[more]
gi\|645267932\|ref\|XP_008239302.1\|	2.8e-36	62.31	PREDICTED: uncharacterized protein LOC103337910, partial [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G04010.1	CSPI05G04010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 6..154 score: 8.1
None	No IPR available	PANTHER	PTHR35110:SF2	SUBFAMILY NOT NAMED	coord: 6..154 score: 8.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G04010	Cla004971	Watermelon (97103) v1	cpiwmB416
CSPI05G04010	Csa5G146270	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G04010	MELO3C005810	Melon (DHL92) v3.5.1	cpimeB348
CSPI05G04010	ClCG01G001250	Watermelon (Charleston Gray)	cpiwcgB379
CSPI05G04010	Lsi09G001090	Bottle gourd (USVL1VR-Ls)	cpilsiB322
CSPI05G04010	MELO3C005810.2	Melon (DHL92) v3.6.1	cpimedB338
CSPI05G04010	CsaV3_5G001370	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G04010	Cla97C01G001280	Watermelon (97103) v2	cpiwmbB349
CSPI05G04010	Bhi12G000038	Wax gourd	cpiwgoB439
CSPI05G04010	Cucsa.193260	Cucumber (Gy14) v1	cgycpiB304
CSPI05G04010	CmaCh02G009630	Cucurbita maxima (Rimu)	cmacpiB617
CSPI05G04010	CmoCh02G009700	Cucurbita moschata (Rifu)	cmocpiB610
CSPI05G04010	Cp4.1LG05g07560	Cucurbita pepo (Zucchini)	cpecpiB732
CSPI05G04010	CsGy5G001250	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G04010	Carg08513	Silver-seed gourd	carcpiB0747

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G04010	Melon (DHL92) v3.6.1	cpimedB403
CSPI05G04010	Cucumber (Gy14) v2	cgybcpiB186
CSPI05G04010	Cucumber (Chinese Long) v3	cpicucB282
CSPI05G04010	Watermelon (97103) v2	cpiwmbB415
CSPI05G04010	Wax gourd	cpiwgoB483
CSPI05G04010	Wild cucumber (PI 183967)	cpicpiB158
CSPI05G04010	Cucumber (Gy14) v1	cgycpiB132
CSPI05G04010	Cucurbita maxima (Rimu)	cmacpiB303
CSPI05G04010	Cucurbita moschata (Rifu)	cmocpiB295
CSPI05G04010	Cucumber (Chinese Long) v2	cpicuB238
CSPI05G04010	Watermelon (Charleston Gray)	cpiwcgB423
CSPI05G04010	Cucurbita pepo (Zucchini)	cpecpiB014