ClCG01G001250 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G001250
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	At1g73940/F2P9_19
Location	CG_Chr01 : 1129232 .. 1133485 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGATTTCCATCACAACACAGCTGAAGTCACACCGAAAAACCCTTTGTGCTTCTCGCTCGTAGTCGACTCTCTCCGAATCTCAGAATCTTGGCGGCGGCGGCAAACCGGTGCGAGGCGGGTAGGAGTAGTCAAAGACGAACAGTGGTAGAGCTCTGTGCCACGAAATAGCGCGGTAGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGTACGTTTTCCCCTCACCTTCAGTTTTTGTTACGTATCATGGTTTATTATTATTATTTTTTTCATTTCATTTCCGGATGGTGTTACAAGAGCTGATTGGTCTAGGTTAGGTTAGCTCGGCAGCCACATTAGCTAAAGCCTGATATTTGGTCTCAGAACTTGATCAAGAGACCACATGTTTTTTTTCTTCCACTCTCTTTCATCCAAGCGACCAGCCTAATTTGAATGTGGATATGTTTTTGAGGAAAAAGCGACTGCCATTTAGGAATGTTCGTTCGCTTAAAGTATTGAAGACTGGTTTCCCAGCCATTCGGCTGGAACATAGAAATTACTTTATTTAAAACTCCATTAAGATATGAATTACTGATATCTATCTGATTTGGCAATCATTTTTCAAAGCAACACTAATCATTAGTCAGGCATAGTTGGTTTTTGAGTAATTTTGATGCAACACTTTTGCAACCAAATAAGCGTTATACCTTTGAACGCTTGCCGCAACATGTAATTTTATATTGAATGGCATTTGTTGCTGGTTCCTAGAGATGCTCAGGAGGAGCAGTGACGAGTGAAGTGGGTTAGAATGAGTAGCCTGTTGTGCCAACCTTCTTGGATTGGCTCCATAACAAATAGGTATCTCCAGCATTCTCTGTCTCACATATGTCATTAGTACTGTCCCAACCCAATGTTAAACCCCAAAGCACCCGAAGGTGATTACATTGAAGATTTTCAATTGAAAATTAAATAATAAAGATTAAAGTGCTTAAAAGGATGCTTAGTTTTGCACCAATACATAGTTGTAGACAAAACCAAATACATAAAATTATCAAAAGCTAAAAAAGAATCTCTATGAAGACACTTATTGCTCTTGCCCATAAAGTCCAAAAGAAAGCTCCCGTCTTCTTTGTACTATGAAAAGGATGCCACCAGAAAAGATGCAAGAATTTCAAACATATTATCGGAATAAGCCAAAAACCAGTCAAAAGCTTCCAAAATAATATGCCAGAAATGAGAAGCATAAGAACAATGGAAAAAAAAGATGAGCAGACGTTTCAGAATGGCTTTGACACATGAGACACCAAGAAGGAGAGATAGACATATAGGGCATACGACATTGTCATTGAAAGCTTTGTTTCCCTCTGTCCTTCCTGCCCTTTCACCCTCTTTTATCACCCGTGGAAAATAGATCAAAGCCAACCAAAACATAAAAAATAAGCCATCTTACCGCTCTTCCCTCAATCAACCCAAAGCCCATTGACATTCTTTTGCCCTAAAGCACCCACCAAGGCCCTTTTACTCTACCCCACAACACTATCAACATCTCCAAACAAACAAGCTATTACCATCAACCCTTACGATACCTTTCTTGTCCTTGGCACAAAATTCTCCACACCTTTTTCACACTTTGACTCAAAAAGATGCTTGTATCTCTAGCCCTCTCCCTTTCTCCACTGCACCACCCTTTCTCCACTGCACCACCCTTTCCCTCACTTGCAAAAACTTCACACCCGCCTTCAACAAAACAGATTGACTTATCCAACAGACTCTTCCACTCCTTATTAGCACTTTGGGCCCTATCGATTTCCCTCTTAAAGATGGGCTTTTGACATGGCTTGACAACAAAGCTCCTCCTTTTATGACCCTTATCAACAAATTTTTTATTTTGAAGGAATTCCTGTGAGAAGTTCTCCAACATTGGGTCAAGCGTATTGATAGACCAACATTGGATCATTATCCCATTCTACCATTTTTATTGACATGTCTCTTATAAAATATATGATTGGTACCTTATCCATGGAGCTATGTTTAGACTAGCTATTTGACGGAAAATTGTCAAATAACACAAAAAAGATTTCATCTTTCATATTAAATGCCACTCTTTTTGGCTAATTGTTTTAATGGCTCGTCCTTGTTCCATTTCGGCCAGGATCTAGACCAAGACCAAAACAATTTTAACTTACTTTTATTGCAAGTTTTGACCATCATTTTTGTGTTTTTTGGTGGCAATCTTGGCCAGGATGAACACCGATAAAGAAAAGAAGTCCAAATTATTTGATATCAAATCTTAAACTTCCATGAACCTTCATCAGCTGGTGGTTTCTTTTTTTTTTAATATTTTTTAATATTTTTTCCTTTTTCTTTTTCACTCCAGTTCTTGTGTTTCCCATCTCTCTCTCTCTCTCTCTCTCTCACTCTATATATATATATATATTCTTTTTGTGGAGTTCTTGAGTTTCCTTTTCATGTCAATCAATATCAAACTTCTCTACCATACAGAGAAGACTTTCAGATGTCTAGATCTCTATTTTTTGTTTACATTTTCAAATTATGAAGTAAACGCTTTTCCCAGAATTTTTTTTTAGTATTTAATAGTAAACTCTCAACTCACCGGTAGAGTTTCTTTTCAGCAACAGGGCATTGATTTCTTCCATTGGTGATAGAAAGTTGTTAGCAAATGATGTTTCTCATATACAGTGAAGACTTGGATTATAAGATGGGACAATTCTTGTTCTCTTACGAGTTTACCCACTTGGACTTTAGACAGAAATTTTCTCTATGTATTAATTAGTCAGATGGAAAGTGATGCATTCTGATGAAGTGTGGAGTTCAATATTTGATATCATATAATTTAGGTTTCTTTTGCTTCTTTCTCAGTGTTCTTCCCGGCCAGGATTTCCACCGAGAAAACACAAAATTGATAATCAAAACTTGCTATAGAAATAAGTTAATTTTGTTTTGGTCTTGGTCTCGATCGCGCCTGAGATGACACTAGGACGAGCTTTTAAAACAATTGACCAAAAAGGATGTTATTTATGAAAGTTGACAACTTTTTTATGCTATTTCTAACAATTTTCCCTAACATGAATCATTACAATAAAATCATTAAAAAATTTTGAATTTTGTTTAACTATTATGGAAAAAAGATTATGAAGTAAAAACTTGCAATTATTGGAAATTATCAAGTGACTTCTACTATTTTATAAATCATGAACCAAGTTGCTGACTTGCTGTATTAGCTCCAATTTAATGTGTCATTTTCGAAATTGGATCATTTGAATATATCTTATAGAAAGCCAATGACGACTAAATCCATCATGTCTGGGACTTGGCAAGTCCCTGTTAAAGGAATTTTTATTTATATAGCACTTCTCCGTTCATCAGTCATGAAAACCAATGGTTTTGCTCGAATTTTGCCCTTTCAATCTAACACTACTTTTCATATCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAGACCTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCTGGCTATCCTCTGGTTTGTTTGTACTGATGCGGGCTCATGACGTATGATGAATTTGTGAGTCCCTCCACCTTTTTTTTGCCCCCCATTTCAACTCATTTTGGTCATATGCAAGGTTTTTCGAACATTTGACATTGACTTGTTTCCATATATAGACTGATAAAGCATGTATTTATATTCATGCTCGATAAAGCATGGATCACAATGCCTCGTTCTCTTTGGTTGGATAGCTAGACTAAACCACTATGGGTTGACCTAATAAGGGCCATGTAAATAAAAGGCTTAGAGAGGTTTAAGTCATGGTGACCACCTATTTAGGCTTTGAGATTTTATGGATTGACTCTCTA

mRNA sequence

CCGATTTCCATCACAACACAGCTGAAGTCACACCGAAAAACCCTTTGTGCTTCTCGCTCGTAGTCGACTCTCTCCGAATCTCAGAATCTTGGCGGCGGCGGCAAACCGGTGCGAGGCGGGTAGGAGTAGTCAAAGACGAACAGTGGTAGAGCTCTGTGCCACGAAATAGCGCGGTAGATTAGATATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAGACCTTTGCTAACGTCTGTTATTTTAGCATGCAGTGGGCTGGCTATCCTCTGGTTTGTTTGTACTGATGCGGGCTCATGACGTATGATGAATTTGTGAGTCCCTCCACCTTTTTTTTGCCCCCCATTTCAACTCATTTTGGTCATATGCAAGGTTTTTCGAACATTTGACATTGACTTGTTTCCATATATAGACTGATAAAGCATGTATTTATATTCATGCTCGATAAAGCATGGATCACAATGCCTCGTTCTCTTTGGTTGGATAGCTAGACTAAACCACTATGGGTTGACCTAATAAGGGCCATGTAAATAAAAGGCTTAGAGAGGTTTAAGTCATGGTGACCACCTATTTAGGCTTTGAGATTTTATGGATTGACTCTCTA

Coding sequence (CDS)

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAG

Protein sequence

MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTPGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK

Homology

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BLAST of ClCG01G001250 vs. TrEMBL
Match: A0A0A0KK52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.1e-70
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNA GGG  AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of ClCG01G001250 vs. TrEMBL
Match: D7TVV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03090 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-40
Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWF         GGGG   G+  G F R+FSRK A N+RKINPK+  QEAS +AQ LY V
Sbjct: 1   MWF--------GGGGGGGRGVAAGLFVRYFSRKCAVNVRKINPKVPYQEASSIAQSLYQV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           +KQ+G L++SN WI+A+E+G+SGLNSKTHMK++LKWMRGRKML LFC  VGS+KKFL CT
Sbjct: 61  IKQNGALSISNTWIQAKEAGISGLNSKTHMKIMLKWMRGRKMLKLFCNHVGSSKKFLHCT 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRK 152
            P DP+  QL+SS E   Q KKR+    KR+K
Sbjct: 121 LPEDPEVAQLRSSLEHKPQTKKRS---TKRKK 141

[Close]

BLAST of ClCG01G001250 vs. TrEMBL
Match: A0A067K078_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20340 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-38
Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 1


Query: 14  GGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAW 73
           GGG + G +  +  R+FSR RA N+RKINPK+   EA+ ++Q LY ++KQHGPLTVSN W
Sbjct: 6   GGGGNVGTIRSSLVRYFSRARAVNVRKINPKVPFPEAAYISQSLYSIIKQHGPLTVSNTW 65

Query: 74  IKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT-PGDPQAEQLKSS 133
             A+ES +SGLNSKTHMK+LLKWMRGRKML LFC  VGS+KKFL CT P +PQ +Q+K  
Sbjct: 66  NHAKESNISGLNSKTHMKILLKWMRGRKMLKLFCSNVGSSKKFLHCTLPEEPQTDQMKEL 125

Query: 134 SESVVQRKKRAKSPVKRRKASK 155
           SE  +Q  K  K+  KR+K  K
Sbjct: 126 SELNLQTDK--KTSTKRKKKQK 145

[Close]

BLAST of ClCG01G001250 vs. TrEMBL
Match: M5WNS2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012869mg PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-38
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGT--------FARFFSRKRAENLRKINPKLTPQEASL 60
           MWF         GGG   A    G+        F R FSRKRAENLRKINPK++  EA+ 
Sbjct: 1   MWF---------GGGAFRASTSTGSGLITSATAFVRHFSRKRAENLRKINPKVSFPEANS 60

Query: 61  VAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGS 120
           +A+DLY VVKQHGPLT+SN W++A++SG+SGLNSKTHMK++LKWMRGRKML LF  QVGS
Sbjct: 61  IARDLYDVVKQHGPLTISNTWVQAKDSGLSGLNSKTHMKIMLKWMRGRKMLKLFPNQVGS 120

Query: 121 NKKFLLCT-PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            KKFLLC+ P DP+  + ++SS   VQ +K +   VKR+K  K
Sbjct: 121 TKKFLLCSLPEDPEVTEFRTSSAVKVQNRKPS---VKRKKQKK 151

[Close]

BLAST of ClCG01G001250 vs. TrEMBL
Match: A0A061G313_THECC (Tumor necrosis factor receptor superfamily member 21 OS=Theobroma cacao GN=TCM_015569 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.8e-37
Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW   + +    GG G+   L+     R+ SR RA N+RKINPK+   EA  +A  LY +
Sbjct: 1   MWLAGVVKNSIKGGHGSIGSLL----VRYMSRSRAVNVRKINPKVPIPEARSIATSLYDI 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           +K HGPLTVSN WI A+E+G+ GLNSKTHMK++LKWMRGR+ML LFC QVGS+KKFL CT
Sbjct: 61  IKDHGPLTVSNTWIHAKEAGIGGLNSKTHMKIMLKWMRGRRMLKLFCNQVGSSKKFLHCT 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            P +PQ  QL+S SE  +Q KK ++   KR+K SK
Sbjct: 121 LPEEPQTNQLESPSELKLQTKKPSQ---KRKKKSK 148

[Close]

BLAST of ClCG01G001250 vs. TAIR10
Match: AT1G73940.1 (AT1G73940.1 unknown protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 81/159 (50.94%), Postives = 97/159 (61.01%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGA-----SAGLVFGT-------FARFFSRKRAENLRKINPKLTPQ 60
           MWF        AGGGG       A  +F           R+ SR+RA N+RKINPK+  Q
Sbjct: 1   MWF--------AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQ 60

Query: 61  EASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCI 120
           EA  ++  LY + K HGPL+V N W++AQE+GVSGLNSKTHMKLLLKWMRG+KML L C 
Sbjct: 61  EAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICN 120

Query: 121 QVGSNKKFL-LCTPGDPQAEQLKSSSESVVQ--RKKRAK 145
           QVGS+KKF     P DP  EQ  +  E+  Q  +KKR+K
Sbjct: 121 QVGSSKKFFHTVLPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of ClCG01G001250 vs. TAIR10
Match: AT5G49410.1 (AT5G49410.1 unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1


Query: 22  VFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 81
           V G   R F+ K    ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C  VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

[Close]

BLAST of ClCG01G001250 vs. NCBI nr
Match: gi|449456295|ref|XP_004145885.1| (PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 3.0e-70
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNA GGG  AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of ClCG01G001250 vs. NCBI nr
Match: gi|659074209|ref|XP_008437479.1| (PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 1.6e-68
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN  GGG   GLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           ++QHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+MLNLFC  VGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+ SES  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of ClCG01G001250 vs. NCBI nr
Match: gi|225426494|ref|XP_002277461.1| (PREDICTED: uncharacterized protein LOC100253102 [Vitis vinifera])

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-40
Identity = 90/152 (59.21%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWF         GGGG   G+  G F R+FSRK A N+RKINPK+  QEAS +AQ LY V
Sbjct: 1   MWF--------GGGGGGGRGVAAGLFVRYFSRKCAVNVRKINPKVPYQEASSIAQSLYQV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           +KQ+G L++SN WI+A+E+G+SGLNSKTHMK++LKWMRGRKML LFC  VGS+KKFL CT
Sbjct: 61  IKQNGALSISNTWIQAKEAGISGLNSKTHMKIMLKWMRGRKMLKLFCNHVGSSKKFLHCT 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRK 152
            P DP+  QL+SS E   Q KKR+    KR+K
Sbjct: 121 LPEDPEVAQLRSSLEHKPQTKKRS---TKRKK 141

[Close]

BLAST of ClCG01G001250 vs. NCBI nr
Match: gi|802733243|ref|XP_012086574.1| (PREDICTED: uncharacterized protein LOC105645560 [Jatropha curcas])

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-38
Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 1


Query: 14  GGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAW 73
           GGG + G +  +  R+FSR RA N+RKINPK+   EA+ ++Q LY ++KQHGPLTVSN W
Sbjct: 6   GGGGNVGTIRSSLVRYFSRARAVNVRKINPKVPFPEAAYISQSLYSIIKQHGPLTVSNTW 65

Query: 74  IKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT-PGDPQAEQLKSS 133
             A+ES +SGLNSKTHMK+LLKWMRGRKML LFC  VGS+KKFL CT P +PQ +Q+K  
Sbjct: 66  NHAKESNISGLNSKTHMKILLKWMRGRKMLKLFCSNVGSSKKFLHCTLPEEPQTDQMKEL 125

Query: 134 SESVVQRKKRAKSPVKRRKASK 155
           SE  +Q  K  K+  KR+K  K
Sbjct: 126 SELNLQTDK--KTSTKRKKKQK 145

[Close]

BLAST of ClCG01G001250 vs. NCBI nr
Match: gi|595849490|ref|XP_007209734.1| (hypothetical protein PRUPE_ppa012869mg [Prunus persica])

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-38
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGT--------FARFFSRKRAENLRKINPKLTPQEASL 60
           MWF         GGG   A    G+        F R FSRKRAENLRKINPK++  EA+ 
Sbjct: 1   MWF---------GGGAFRASTSTGSGLITSATAFVRHFSRKRAENLRKINPKVSFPEANS 60

Query: 61  VAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGS 120
           +A+DLY VVKQHGPLT+SN W++A++SG+SGLNSKTHMK++LKWMRGRKML LF  QVGS
Sbjct: 61  IARDLYDVVKQHGPLTISNTWVQAKDSGLSGLNSKTHMKIMLKWMRGRKMLKLFPNQVGS 120

Query: 121 NKKFLLCT-PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            KKFLLC+ P DP+  + ++SS   VQ +K +   VKR+K  K
Sbjct: 121 TKKFLLCSLPEDPEVTEFRTSSAVKVQNRKPS---VKRKKQKK 151

The following BLAST results are available for this feature:

BLAST of ClCG01G001250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK52_CUCSA	2.1e-70	87.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G146270 PE=4 SV=1	[more]
D7TVV8_VITVI	1.7e-40	59.21	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03090 PE=4 SV=...	[more]
A0A067K078_JATCU	1.6e-38	58.45	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20340 PE=4 SV=1	[more]
M5WNS2_PRUPE	1.6e-38	55.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012869mg PE=4 SV=1	[more]
A0A061G313_THECC	6.8e-37	54.19	Tumor necrosis factor receptor superfamily member 21 OS=Theobroma cacao GN=TCM_0...	[more]

BLAST of ClCG01G001250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73940.1	1.8e-33	50.94	unknown protein	[more]
AT5G49410.1	1.8e-17	37.37	unknown protein	[more]

BLAST of ClCG01G001250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456295\|ref\|XP_004145885.1\|	3.0e-70	87.66	PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus]	[more]
gi\|659074209\|ref\|XP_008437479.1\|	1.6e-68	85.71	PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]	[more]
gi\|225426494\|ref\|XP_002277461.1\|	2.5e-40	59.21	PREDICTED: uncharacterized protein LOC100253102 [Vitis vinifera]	[more]
gi\|802733243\|ref\|XP_012086574.1\|	2.3e-38	58.45	PREDICTED: uncharacterized protein LOC105645560 [Jatropha curcas]	[more]
gi\|595849490\|ref\|XP_007209734.1\|	2.3e-38	55.83	hypothetical protein PRUPE_ppa012869mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G001250.1	ClCG01G001250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 6..154 score: 1.3
None	No IPR available	PANTHER	PTHR35110:SF2	SUBFAMILY NOT NAMED	coord: 6..154 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G001250	Csa5G146270	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G001250	MELO3C005810	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G001250	Cla004971	Watermelon (97103) v1	wcgwmB142
ClCG01G001250	Cla97C01G001280	Watermelon (97103) v2	wcgwmbB089
ClCG01G001250	Bhi12G000038	Wax gourd	wcgwgoB192
ClCG01G001250	CSPI05G04010	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G001250	Cucsa.193260	Cucumber (Gy14) v1	cgywcgB351
ClCG01G001250	CmaCh02G009630	Cucurbita maxima (Rimu)	cmawcgB522
ClCG01G001250	CmoCh02G009700	Cucurbita moschata (Rifu)	cmowcgB521
ClCG01G001250	Lsi09G001090	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G001250	Cp4.1LG05g07560	Cucurbita pepo (Zucchini)	cpewcgB636
ClCG01G001250	CsGy5G001250	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G001250	MELO3C005810.2	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G001250	Carg08513	Silver-seed gourd	carwcgB0686
ClCG01G001250	CsaV3_5G001370	Cucumber (Chinese Long) v3	cucwcgB385

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G001250	Cucumber (Gy14) v1	cgywcgB148
ClCG01G001250	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G001250	Wild cucumber (PI 183967)	cpiwcgB302
ClCG01G001250	Cucumber (Chinese Long) v2	cuwcgB291
ClCG01G001250	Melon (DHL92) v3.5.1	mewcgB468
ClCG01G001250	Cucurbita pepo (Zucchini)	cpewcgB009
ClCG01G001250	Cucurbita pepo (Zucchini)	cpewcgB203
ClCG01G001250	Cucumber (Gy14) v2	cgybwcgB268
ClCG01G001250	Melon (DHL92) v3.6.1	medwcgB460
ClCG01G001250	Cucumber (Chinese Long) v3	cucwcgB301
ClCG01G001250	Watermelon (97103) v2	wcgwmbB118
ClCG01G001250	Wax gourd	wcgwgoB209
ClCG01G001250	Watermelon (Charleston Gray)	wcgwcgB109
ClCG01G001250	Cucurbita moschata (Rifu)	cmowcgB247