Cla97C01G001280 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G001280
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Tumor necrosis factor receptor superfamily member 21
Location	Cla97Chr01 : 1044816 .. 1048502 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGTACGTTTTCCCCTCACCTTCAGTTTTTGTTACGTATCATGGTTTATTATTATTATTTTTTTCATTTCATTTCCGGATGGTGTTACAAGAGCTGATTGGTCTAGGTTAGGTTAGCTCGGCAGCCACATTAGCTAAAGCCTGATATTTGGTCTCAGAACTTGATCAAGAGACCACATGTTTTTTTTCTTCCACTCTCTTTCATCCAAGCGACCAGCCTAATTTGAATGTGGATATGTTTTTGAGGAAAAAGCGACTGCCATTTAGGAATGTTCGTTCGCTTAAAGTATTGAAGACTGGTTTCCCAGCCATTCGGCTGGAACATAGAAATTACTTTATTTAAAACTCCATTAAGATATGAATTACTGATATCTATCTGATTTGGCAATCATTTTTCAAAGCAACACTAATCATTAGTCAGGCATAGTTGGTTTTTGAGTAATTTTGATGCAACACTTTTGCAACCAAATAAGCGTTATACCTTTGAACGCTTGCCGCAACATGTAATTTTATATTGAATGGCATTTGTTGCTGGTTCCTAGAGATGCTCAGGAGGAGCAGTGACGAGTGAAGTGGGTTAGAATGAGTAGCCTGTTGTGCCAACCTTCTTGGATTGGCTCCATAACAAATAGGTATCTCCAGCATTCTCTGTCTCACATATGTCATTAGTACTGTCCCAACCCAATGTTAAACCCCAAAGCACCCGAAGGTGATTACATTGAAGATTTTCAATTGAAAATTAAATAATAAAGATTAAAGTGCTTAAAAGGATGCTTAGTTTTGCACCAATACATAGTTGTAGACAAAACCAAATACATAAAATTATCAAAAGCTAAAAAAGAATCTCTATGAAGACACTTATTGCTCTTGCCCATAAAGTCCAAAAGAAAGCTCCCGTCTTCTTTGTACTATGAAAAGGATGCCACCAGAAAAGATGCAAGAATTTCAAACATATTATCGGAATAAGCCAAAAACCAGTCAAAAGCTTCCAAAATAATATGCCAGAAATGAGAAGCATAAGAACAATGGAAAAAAAAGATGAGCAGACGTTTCAGAATGGCTTTGACACATGAGACACCAAGAAGGAGAGATAGACATATAGGGCATACGACATTGTCATTGAAAGCTTTGTTTCCCTCTGTCCTTCCTGCCCTTTCACCCTCTTTTATCACCCGTGGAAAATAGATCAAAGCCAACCAAAACATAAAAAATAAGCCATCTTACCGCTCTTCCCTCAATCAACCCAAAGCCCATTGACATTCTTTTGCCCTAAAGCACCCACCAAGGCCCTTTTACTCTACCCCACAACACTATCAACATCTCCAAACAAACAAGCTATTACCATCAACCCTTACGATACCTTTCTTGTCCTTGGCACAAAATTCTCCACACCTTTTTCACACTTTGACTCAAAAAGATGCTTGTATCTCTAGCCCTCTCCCTTTCTCCACTGCACCACCCTTTCTCCACTGCACCACCCTTTCCCTCACTTGCAAAAACTTCACACCCGCCTTCAACAAAACAGATTGACTTATCCAACAGACTCTTCCACTCCTTATTAGCACTTTGGGCCCTATCGATTTCCCTCTTAAAGATGGGCTTTTGACATGGCTTGACAACAAAGCTCCTCCTTTTATGACCCTTATCAACAAATTTTTTATTTTGAAGGAATTCCTGTGAGAAGTTCTCCAACATTGGGTCAAGCGTATTGATAGACCAACATTGGATCATTATCCCATTCTACCATTTTTATTGACATGTCTCTTATAAAATATATGATTGGTACCTTATCCATGGAGCTATGTTTAGACTAGCTATTTGACGGAAAATTGTCAAATAACACAAAAAAGATTTCATCTTTCATATTAAATGCCACTCTTTTTGGCTAATTGTTTTAATGGCTCGTCCTTGTTCCATTTCGGCCAGGATCTAGACCAAGACCAAAACAATTTTAACTTACTTTTATTGCAAGTTTTGACCATCATTTTTGTGTTTTTTGGTGGCAATCTTGGCCAGGATGAACACCGATAAAGAAAAGAAGTCCAAATTATTTGATATCAAATCTTAAACTTCCATGAACCTTCATCAGCTGGTGGTTTCTTTTTTTTTTAATATTTTTTAATATTTTTTCCTTTTTCTTTTTCACTCCAGTTCTTGTGTTTCCCATCTCTCTCTCTCTCTCTCTCTCTCACTCTATATATATATATATATTCTTTTTGTGGAGTTCTTGAGTTTCCTTTTCATGTCAATCAATATCAAACTTCTCTACCATACAGAGAAGACTTTCAGATGTCTAGATCTCTATTTTTTGTTTACATTTTCAAATTATGAAGTAAACGCTTTTCCCAGAATTTTTTTTTAGTATTTAATAGTAAACTCTCAACTCACCGGTAGAGTTTCTTTTCAGCAACAGGGCATTGATTTCTTCCATTGGTGATAGAAAGTTGTTAGCAAATGATGTTTCTCATATACAGTGAAGACTTGGATTATAAGATGGGACAATTCTTGTTCTCTTACGAGTTTACCCACTTGGACTTTAGACAGAAATTTTCTCTATGTATTAATTAGTCAGATGGAAAGTGATGCATTCTGATGAAGTGTGGAGTTCAATATTTGATATCATATAATTTAGGTTTCTTTTGCTTCTTTCTCAGTGTTCTTCCCGGCCAGGATTTCCACCGAGAAAACACAAAATTGATAATCAAAACTTGCTATAGAAATAAGTTAATTTTGTTTTGGTCTTGGTCTCGATCGCGCCTGAGATGACACTAGGACGAGCTTTTAAAACAATTGACCAAAAAGGATGTTATTTATGAAAGTTGACAACTTTTTTATGCTATTTCTAACAATTTTCCCTAACATGAATCATTACAATAAAATCATTAAAAAATTTTGAATTTTGTTTAACTATTATGGAAAAAAGATTATGAAGTAAAAACTTGCAATTATTGGAAATTATCAAGTGACTTCTACTATTTTATAAATCATGAACCAAGTTGCTGACTTGCTGTATTAGCTCCAATTTAATGTGTCATTTTCGAAATTGGATCATTTGAATATATCTTATAGAAAGCCAATGACGACTAAATCCATCATGTCTGGGACTTGGCAAGTCCCTGTTAAAGGAATTTTTATTTATATAGCACTTCTCCGTTCATCAGTCATGAAAACCAATGGTTTTGCTCGAATTTTGCCCTTTCAATCTAACACTACTTTTCATATCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAG

mRNA sequence

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAG

Coding sequence (CDS)

ATGTGGTTTCGCAGTATCCAAAGAATTGGAAATGCAGGTGGAGGTGGAGCATCTGCTGGCCTTGTGTTCGGCACATTTGCGAGGTTTTTCTCGAGGAAGCGAGCAGAGAATCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAACAGCACGGCCCTCTAACCGTTTCCAATGCTTGGATTAAAGCTCAGGAGTCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAGCTACTGCTAAAATGGATGAGAGGAAGGAAGATGCTCAACCTTTTCTGCATCCAAGTTGGTTCCAACAAGAAATTTCTGCTTTGTACTCCCGGTGATCCTCAGGCAGAACAGTTGAAGAGTTCTTCAGAATCTGTAGTCCAGAGAAAGAAGAGAGCAAAGTCACCAGTAAAGAGAAGAAAGGCATCAAAATAG

Protein sequence

MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTPGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK

Homology

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BLAST of Cla97C01G001280 vs. NCBI nr
Match: XP_004145885.1 (PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hypothetical protein Csa_5G146270 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 9.3e-68
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNA GGG  AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cla97C01G001280 vs. NCBI nr
Match: XP_008437479.1 (PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 5.1e-66
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN  GGG   GLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           ++QHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+MLNLFC  VGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+ SES  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cla97C01G001280 vs. NCBI nr
Match: XP_022996189.1 (uncharacterized protein LOC111491495 [Cucurbita maxima])

HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63
Identity = 127/153 (83.01%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 2   WFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGG SAGLVF TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+AE+LKS+SE VVQR+K+ K+ ++R+KASK
Sbjct: 123 NDPRAEELKSASEPVVQRRKKQKARIRRKKASK 155

[Close]

BLAST of Cla97C01G001280 vs. NCBI nr
Match: XP_022958708.1 (uncharacterized protein LOC111459852 [Cucurbita moschata])

HSP 1 Score: 250.0 bits (637), Expect = 5.3e-63
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 2   WFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVV 61
           W R IQ I NA GGG SAGLVF TF R+FSR RAENLRKINPKLTPQEASLVAQDLYGVV
Sbjct: 3   WLRGIQTIRNADGGGGSAGLVFSTFTRYFSRSRAENLRKINPKLTPQEASLVAQDLYGVV 62

Query: 62  KQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCTP 121
           KQHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TP
Sbjct: 63  KQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLATP 122

Query: 122 GDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            DP+AE+LKS+SE VVQR+K+ K+ ++RRKASK
Sbjct: 123 DDPRAEELKSASEPVVQRRKKQKAQIRRRKASK 155

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BLAST of Cla97C01G001280 vs. NCBI nr
Match: XP_022159821.1 (uncharacterized protein LOC111026127 [Momordica charantia])

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 128/155 (82.58%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MW R  QRIG+A GGG SAGLVF TFAR+FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWLRGFQRIGHADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           VKQHGPL++SNAWIKAQE GVSGLNSKTHMKL+LKWMRGRKML L C QVGSNKKFLL T
Sbjct: 61  VKQHGPLSISNAWIKAQECGVSGLNSKTHMKLMLKWMRGRKMLKLLCNQVGSNKKFLLST 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            P DPQA+QLKSSSE  VQR+KR K P +RRK SK
Sbjct: 121 LPDDPQADQLKSSSELGVQREKRVKPPARRRKPSK 155

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BLAST of Cla97C01G001280 vs. TrEMBL
Match: tr|A0A0A0KK52|A0A0A0KK52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.2e-68
Identity = 135/154 (87.66%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGNA GGG  AGLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNADGGGGFAGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           V+QHGPLT+SNAWIKAQESGV+GLNSKTHMKLLLKWMRGRKMLNLFC  VGSNKKFLLCT
Sbjct: 61  VQQHGPLTISNAWIKAQESGVNGLNSKTHMKLLLKWMRGRKMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+SSE+  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNSSEAGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cla97C01G001280 vs. TrEMBL
Match: tr|A0A1S3ATS9|A0A1S3ATS9_CUCME (uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.4e-66
Identity = 132/154 (85.71%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWFRSIQRIGN  GGG   GLVF TFAR FSRKRAENLRKINPKLTPQEASLVAQDLYGV
Sbjct: 1   MWFRSIQRIGNTDGGGGLPGLVFNTFARHFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           ++QHGPLTVSNAWIKAQESGV+GLNSKTHMKLLLKWMRGR+MLNLFC  VGSNKKFLLCT
Sbjct: 61  IQQHGPLTVSNAWIKAQESGVNGLNSKTHMKLLLKWMRGRRMLNLFCHYVGSNKKFLLCT 120

Query: 121 PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           P DP+AE+LK+ SES  QRKKRAKSP KRRK SK
Sbjct: 121 PDDPRAEELKNYSESGPQRKKRAKSPTKRRKTSK 154

[Close]

BLAST of Cla97C01G001280 vs. TrEMBL
Match: tr|A0A2N9IE90|A0A2N9IE90_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.3e-41
Identity = 96/155 (61.94%), Postives = 115/155 (74.19%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGASAGLVFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGV 60
           MWF     + N    G       G   R FSRKRAEN+RKINP++TPQEAS +AQDLY +
Sbjct: 1   MWFGG---LFNRSSNGTXXXXXXGIITRHFSRKRAENVRKINPRVTPQEASTIAQDLYHL 60

Query: 61  VKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 120
           + Q GPLTVSNAWI+AQESG+SGL+SKTH+KL+LKWMRGRKML LFC Q+GS+KKFLL T
Sbjct: 61  INQRGPLTVSNAWIQAQESGISGLDSKTHLKLMLKWMRGRKMLKLFCNQIGSSKKFLLST 120

Query: 121 -PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
            P +PQ EQLKS SE  +Q KK +   +KRRK +K
Sbjct: 121 LPEEPQTEQLKSPSEPKLQTKKPS---IKRRKQNK 149

[Close]

BLAST of Cla97C01G001280 vs. TrEMBL
Match: tr|A0A2I4ESX4|A0A2I4ESX4_9ROSI (uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.9e-41
Identity = 102/160 (63.75%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGGAS----AGLVFG-TFARFFSRKRAENLRKINPKLTPQEASLVAQ 60
           MWFR         GGGAS    AG++   TF R FSRKRAENLRKINPK+T QEAS +AQ
Sbjct: 1   MWFR---------GGGASWTSGAGMLTATTFVRHFSRKRAENLRKINPKVTRQEASSIAQ 60

Query: 61  DLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKK 120
           D+Y ++KQ+GPLTVSNAWI  QESG+SGLNSKTHMKL+LKWMRGRKML LFC QVGS+KK
Sbjct: 61  DIYHLIKQNGPLTVSNAWIHVQESGISGLNSKTHMKLMLKWMRGRKMLKLFCNQVGSSKK 120

Query: 121 FLLCT-PGDPQAEQLKSSSESVVQRKKRAKSPVKRRKASK 155
           FLL T P +PQ EQLK  S+  +Q +K +   VK RK ++
Sbjct: 121 FLLSTLPEEPQTEQLKHPSDLKLQTEKPS---VKGRKKTR 148

[Close]

BLAST of Cla97C01G001280 vs. TrEMBL
Match: tr|A0A2P5F5J9|A0A2P5F5J9_9ROSA (Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=TorRG33x02_113180 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.4e-40
Identity = 91/128 (71.09%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 28  RFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSK 87
           R+FSRKRAENLRKINP++TPQEAS +A++LY V+KQHGPLTVSNAW+ A++SGVSGLNSK
Sbjct: 31  RYFSRKRAENLRKINPRVTPQEASSIARNLYDVLKQHGPLTVSNAWLHAKDSGVSGLNSK 90

Query: 88  THMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT-PGDPQAEQLKSSSESVVQRKKRAKSP 147
           THMKLLLKWMRGRKML L+C QVGS+KKFLL T P DP+AEQL+  SE  +Q KK   S 
Sbjct: 91  THMKLLLKWMRGRKMLKLWCNQVGSSKKFLLSTLPEDPKAEQLRRESEVKLQTKK--PSS 150

Query: 148 VKRRKASK 155
           +K RK ++
Sbjct: 151 IKGRKQTR 156

[Close]

BLAST of Cla97C01G001280 vs. TAIR10
Match: AT1G73940.1 (unknown protein)

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-32
Identity = 81/159 (50.94%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 1   MWFRSIQRIGNAGGGG-----ASAGLVF-------GTFARFFSRKRAENLRKINPKLTPQ 60
           MWF        AGGGG       A  +F           R+ SR+RA N+RKINPK+  Q
Sbjct: 1   MWF--------AGGGGGLRKLCRASAIFDNEISYNSLLVRYMSRERAVNVRKINPKVPIQ 60

Query: 61  EASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVSGLNSKTHMKLLLKWMRGRKMLNLFCI 120
           EA  ++  LY + K HGPL+V N W++AQE+GVSGLNSKTHMKLLLKWMRG+KML L C 
Sbjct: 61  EAYAISNSLYDLFKLHGPLSVPNTWLRAQEAGVSGLNSKTHMKLLLKWMRGKKMLKLICN 120

Query: 121 QVGSNKKFL-LCTPGDPQAEQLKSSSESVVQ--RKKRAK 145
           QVGS+KKF     P DP  EQ  +  E+  Q  +KKR+K
Sbjct: 121 QVGSSKKFFHTVLPEDPLQEQPAAPIENKKQAVKKKRSK 151

[Close]

BLAST of Cla97C01G001280 vs. TAIR10
Match: AT5G49410.1 (unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 22  VFGTFARFFSRKRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGV 81
           V G   R F+ K    ++ I     P++   + + ++ ++K HGPLT++  W + +E G+
Sbjct: 16  VVGMLTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGL 75

Query: 82  SGLNSKTHMKLLLKWMRGRKMLNLFCIQVGSNKKFLLCT 121
            GL SK HMK++L+WMR R+ L L C  VG +K+FL  T
Sbjct: 76  RGLTSKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTT 114

The following BLAST results are available for this feature:

BLAST of Cla97C01G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145885.1	9.3e-68	87.66	PREDICTED: uncharacterized protein LOC101211684 [Cucumis sativus] >KGN49953.1 hy...	[more]
XP_008437479.1	5.1e-66	85.71	PREDICTED: uncharacterized protein LOC103482888 [Cucumis melo]	[more]
XP_022996189.1	4.0e-63	83.01	uncharacterized protein LOC111491495 [Cucurbita maxima]	[more]
XP_022958708.1	5.3e-63	83.01	uncharacterized protein LOC111459852 [Cucurbita moschata]	[more]
XP_022159821.1	3.4e-62	82.58	uncharacterized protein LOC111026127 [Momordica charantia]	[more]

BLAST of Cla97C01G001280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK52\|A0A0A0KK52_CUCSA	6.2e-68	87.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146270 PE=4 SV=1	[more]
tr\|A0A1S3ATS9\|A0A1S3ATS9_CUCME	3.4e-66	85.71	uncharacterized protein LOC103482888 OS=Cucumis melo OX=3656 GN=LOC103482888 PE=...	[more]
tr\|A0A2N9IE90\|A0A2N9IE90_FAGSY	1.3e-41	61.94	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50346 PE=4 SV=1	[more]
tr\|A0A2I4ESX4\|A0A2I4ESX4_9ROSI	4.9e-41	63.75	uncharacterized protein LOC108992387 OS=Juglans regia OX=51240 GN=LOC108992387 P...	[more]
tr\|A0A2P5F5J9\|A0A2P5F5J9_9ROSA	5.4e-40	71.09	Tumor necrosis factor receptor family protein OS=Trema orientalis OX=63057 GN=To...	[more]

BLAST of Cla97C01G001280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G001280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73940.1	4.5e-32	50.94	unknown protein	[more]
AT5G49410.1	1.8e-17	37.37	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G001280.1	Cla97C01G001280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..154
None	No IPR available	PANTHER	PTHR35110:SF2	SUBFAMILY NOT NAMED	coord: 9..151
None	No IPR available	PANTHER	PTHR35110	FAMILY NOT NAMED	coord: 9..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G001280	Cla004971	Watermelon (97103) v1	wmwmbB235
Cla97C01G001280	Csa5G146270	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G001280	MELO3C005810	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G001280	ClCG01G001250	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G001280	CSPI05G04010	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G001280	Cucsa.193260	Cucumber (Gy14) v1	cgywmbB357
Cla97C01G001280	CmaCh02G009630	Cucurbita maxima (Rimu)	cmawmbB605
Cla97C01G001280	CmoCh02G009700	Cucurbita moschata (Rifu)	cmowmbB581
Cla97C01G001280	Lsi09G001090	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G001280	CsGy5G001250	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G001280	MELO3C005810.2	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G001280	Carg08513	Silver-seed gourd	carwmbB0739
Cla97C01G001280	CsaV3_5G001370	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G001280	Bhi12G000038	Wax gourd	wgowmbB055

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G001280	Watermelon (97103) v2	wmbwmbB034
Cla97C01G001280	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G001280	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G001280	Wax gourd	wgowmbB167