CsGy4G019010 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G019010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Seed maturation protein
Location	Chr4 : 25086552 .. 25087771 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAGTTGATAAAACTGCCGCATTGCATGGAGACGCGTAGCAGCAACATGTGTCAAAAGAATAAACCCAAACGGGATAATTAAGTGCCACGTTTAAAAGAAAAGTTCGAGGTGCAGTTGTGGTATTGATATTACAGAAAGTATATATAAGATAGGATTGAGGTGCTTATGTCTTCATAAAATCAAATCATATCAGTATCATTTCATAGAATTGAAGAAATAATAGAAATGCAGTCAGGAAAGAAGGCAGTGGAATCTATGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCTAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGGTTTTTCTTTTATTTTCCTCCTCACTCCTAACTCTTTCATGTCATAAAGAGTAAATTTGAAAAGTTGCAACAAAATTGGCACTCATCTTTATCAACTAAAGTTCAAAGATTTTGGGCTTTTTTAGTTATTGAAGTGTTTAATTATTTGAATTGGTTTTTGATTTGGTTGGATAGATGGAGAAAGTAACGGCCCGTGATCCGTTGGCAAAAGAAATTGCCGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGGCGCAGCGGCAGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACATACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCAACAGACGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCTTGTGACAGAGGGTGTGGTTGGGGCGCACCCGATCGGCACCGAGACGGGCACTGGAAGGACCACAACAGCCCACAACCCTCTTGCTGGTGGTGGAACTGGGTACGGGACCGGCACCCGGACCGGGGGAAGCTATACTTAATGTGGAGATGTTTTTACTCTTTTATGTTATAGACGATGGACTTTGCTGTTTTATTGTTGAAGTCCGATGTGCTGTGTATTTGGTTGTTTGCATTTTGTATGGTTTTAATTTCGTTTTTAGGTTTTTTATGTTGTGTACCCTCCCTTGTGGAGGCTGCTTTGTCAAAGTGTGATGATGAATAAAATTTGTACCTATTAATCTTTGCCTATGACTAATGTGCAACAATCATATATATGATGACGTAAAATAAACTTCT

mRNA sequence

AAAAGAGTTGATAAAACTGCCGCATTGCATGGAGACGCGTAGCAGCAACATGTGTCAAAAGAATAAACCCAAACGGGATAATTAAGTGCCACGTTTAAAAGAAAAGTTCGAGGTGCAGTTGTGGTATTGATATTACAGAAAGTATATATAAGATAGGATTGAGGTGCTTATGTCTTCATAAAATCAAATCATATCAGTATCATTTCATAGAATTGAAGAAATAATAGAAATGCAGTCAGGAAAGAAGGCAGTGGAATCTATGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCTAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGATGGAGAAAGTAACGGCCCGTGATCCGTTGGCAAAAGAAATTGCCGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGGCGCAGCGGCAGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACATACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCAACAGACGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCTTGTGACAGAGGGTGTGGTTGGGGCGCACCCGATCGGCACCGAGACGGGCACTGGAAGGACCACAACAGCCCACAACCCTCTTGCTGGTGGTGGAACTGGGTACGGGACCGGCACCCGGACCGGGGGAAGCTATACTTAATGTGGAGATGTTTTTACTCTTTTATGTTATAGACGATGGACTTTGCTGTTTTATTGTTGAAGTCCGATGTGCTGTGTATTTGGTTGTTTGCATTTTGTATGGTTTTAATTTCGTTTTTAGGTTTTTTATGTTGTGTACCCTCCCTTGTGGAGGCTGCTTTGTCAAAGTGTGATGATGAATAAAATTTGTACCTATTAATCTTTGCCTATGACTAATGTGCAACAATCATATATATGATGACGTAAAATAAACTTCT

Coding sequence (CDS)

ATGCAGTCAGGAAAGAAGGCAGTGGAATCTATGAAGGAATCGGCTGCTAATGTTGCAGCCTCCGCTAAGGCTGGCATGGACAAGACTAAAGCTACTGTTCAAGAGAAGATGGAGAAAGTAACGGCCCGTGATCCGTTGGCAAAAGAAATTGCCGAAGAGAAGAAAGAAGCAAAGATCCACGAGGCAGAGCTCAACAAACAGGAGGCGCGTCAGCACAACGCCGCCGTCAGACAGGCTGCTACGGGCGCAGCGGCAGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACACATGGAACGCACCCAACAACCCACTCAACCGCCACATACTCCACCACTGGAGCCCATGGCTACACCACTGGGACCCAACAGACGTCGGCTTTGCCTGGCCACGGCACCGGCCAACCAACTGGCCTTGTGACAGAGGGTGTGGTTGGGGCGCACCCGATCGGCACCGAGACGGGCACTGGAAGGACCACAACAGCCCACAACCCTCTTGCTGGTGGTGGAACTGGGTACGGGACCGGCACCCGGACCGGGGGAAGCTATACTTAA

Protein sequence

MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHEAELNKQEARQHNAAVRQAATGAAAATHGTHPTTHSTATHGTHPTTHSTATYSTTGAHGYTTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTRTGGSYT

Homology

[Close]

BLAST of CsGy4G019010 vs. NCBI nr
Match: XP_004146409.1 (PREDICTED: 18 kDa seed maturation protein [Cucumis sativus] >KGN54793.1 hypothetical protein Csa_4G499300 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 4.6e-45
Identity = 164/186 (88.17%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH
Sbjct: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
                QTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR
Sbjct: 121 XXXXXQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 174

Query: 181 TGGSYT 187
           TGGSYT
Sbjct: 181 TGGSYT 174

[Close]

BLAST of CsGy4G019010 vs. NCBI nr
Match: XP_022924969.1 (late embryogenesis abundant protein 46 [Cucurbita moschata] >XP_023518250.1 late embryogenesis abundant protein 46 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.2 bits (430), Expect = 6.4e-39
Identity = 139/186 (74.73%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGK A+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIH
Sbjct: 1   MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                            XXXXXXXXXXXXXXXXXXXXXX      XXXXXX    GA GY
Sbjct: 61  --------------EAEXXXXXXXXXXXXXXXXXXXXXXHGMHPTXXXXXXYSTTGAQGY 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
           TTGTQQ SA+PGHGTGQPTG VTEGVVG HPIG +TGTGRTTTAHNP  GGG G  T   
Sbjct: 121 TTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGG-GDATRYS 171

Query: 181 TGGSYT 187
           TGG Y+
Sbjct: 181 TGGGYS 171

[Close]

BLAST of CsGy4G019010 vs. NCBI nr
Match: XP_008442129.1 (PREDICTED: 18 kDa seed maturation protein [Cucumis melo])

HSP 1 Score: 166.4 bits (420), Expect = 9.3e-38
Identity = 155/189 (82.01%), Postives = 157/189 (83.07%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGKKA+ES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH
Sbjct: 1   MQSGKKAMESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
                   ALPGHGTGQPTG VTEGVVG HPIGT TGTGRTTTAHNPLAGG TGYGTGTR
Sbjct: 121 XXXXXXXXALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTR 177

Query: 181 ---TGGSYT 187
              TGGSYT
Sbjct: 181 TGGTGGSYT 177

[Close]

BLAST of CsGy4G019010 vs. NCBI nr
Match: XP_022966467.1 (late embryogenesis abundant protein 46 [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 1.6e-37
Identity = 145/186 (77.96%), Postives = 150/186 (80.65%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGK A+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIH
Sbjct: 1   MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GA GY
Sbjct: 61  --------------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSTTGAQGY 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
           TTGTQQ SA+PGHGTGQPT  VTEGVVG HPIG +TGTGRTTTAHNP  GGG    T   
Sbjct: 121 TTGTQQMSAVPGHGTGQPTDRVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGD--ATRYS 170

Query: 181 TGGSYT 187
           TGG Y+
Sbjct: 181 TGGGYS 170

[Close]

BLAST of CsGy4G019010 vs. NCBI nr
Match: XP_007162333.1 (hypothetical protein PHAVU_001G143100g [Phaseolus vulgaris] >ESW34327.1 hypothetical protein PHAVU_001G143100g [Phaseolus vulgaris])

HSP 1 Score: 133.3 bits (334), Expect = 8.7e-28
Identity = 91/186 (48.92%), Postives = 107/186 (57.53%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQ GKKA ES+KE+A+N+ ASAKAGM+KTKATVQEK E++TARDPL KE+A +KKEA+++
Sbjct: 1   MQGGKKAGESVKETASNMGASAKAGMEKTKATVQEKAERLTARDPLQKEVATQKKEARVN 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                                                                  G HG+
Sbjct: 61  ------------------------------QAELDKQAVREHNAAAKQSATHSATGEHGH 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGG-TGYGTGT 180
            TG  QTSA+PGHGTGQPTG VTEGVVG+HPIGT  G G TTTAHN  AGG    YG G 
Sbjct: 121 HTGLHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTTTAHNTHAGGNPNDYGYG- 154

Query: 181 RTGGSY 186
            TGG+Y
Sbjct: 181 -TGGTY 154

[Close]

BLAST of CsGy4G019010 vs. TAIR10
Match: AT5G06760.1 (Late Embryogenesis Abundant 4-5)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 74/181 (40.88%), Postives = 88/181 (48.62%), Query Frame = 0


Query: 8   VESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHXXXXXXX 67
           ++SMKE+A+N+AASAK+GMDKTKAT++EK EK+  RDP+ K++A + KE KI+       
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKIN------- 60

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGYTTGTQQT 127
                                           XXXXXXXXXXXX    G           
Sbjct: 61  ------------QAEMQKRETRQHNAAMKEAAXXXXXXXXXXXXHSTTGQXXXXXXXXXX 120

Query: 128 SALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGG--TGYGTGTRTGGSY 187
                      T  V EG     PIG  TGTGR TTAHN   GGG  TGYG    TGG Y
Sbjct: 121 XXXXXXXXXXLTDRVVEGTAVTDPIGRNTGTGR-TTAHNTHVGGGGATGYG----TGGGY 157

[Close]

BLAST of CsGy4G019010 vs. Swiss-Prot
Match: sp|Q01417|PM1_SOYBN (18 kDa seed maturation protein OS=Glycine max OX=3847 GN=GMPM1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-28
Identity = 100/181 (55.25%), Postives = 114/181 (62.98%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQ GKKA ES+KE+A N+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK++
Sbjct: 1   MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                                                 XXXXXXXXXXXXXX   G +G 
Sbjct: 61  ----------QAELDKQAARQHNTAAKQSATTAGHMGHXXXXXXXXXXXXXXSTTGEYGQ 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGG---GTGYGT 179
             G  QTSA+PGHGTGQPTG VTEGVVG+HPIGT  G G T TAHN  AGG     GYGT
Sbjct: 121 PMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGT 171

[Close]

BLAST of CsGy4G019010 vs. Swiss-Prot
Match: sp|Q9FG31|LEA46_ARATH (Late embryogenesis abundant protein 46 OS=Arabidopsis thaliana OX=3702 GN=LEA46 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-08
Identity = 74/181 (40.88%), Postives = 88/181 (48.62%), Query Frame = 0


Query: 8   VESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIHXXXXXXX 67
           ++SMKE+A+N+AASAK+GMDKTKAT++EK EK+  RDP+ K++A + KE KI+       
Sbjct: 1   MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKIN------- 60

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGYTTGTQQT 127
                                           XXXXXXXXXXXX    G           
Sbjct: 61  ------------QAEMQKRETRQHNAAMKEAAXXXXXXXXXXXXHSTTGQXXXXXXXXXX 120

Query: 128 SALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGG--TGYGTGTRTGGSY 187
                      T  V EG     PIG  TGTGR TTAHN   GGG  TGYG    TGG Y
Sbjct: 121 XXXXXXXXXXLTDRVVEGTAVTDPIGRNTGTGR-TTAHNTHVGGGGATGYG----TGGGY 157

[Close]

BLAST of CsGy4G019010 vs. Swiss-Prot
Match: sp|Q00747|LE25_SOLLC (Protein LE25 OS=Solanum lycopersicum OX=4081 GN=LE25 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.4e-06
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 13 ESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKI 60
          ++  + A++AKAGM+KTKA VQEK E++T RDPL KE+A EKKE ++
Sbjct: 2  QTGKDAASAAKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRV 48

[Close]

BLAST of CsGy4G019010 vs. TrEMBL
Match: tr|A0A0A0KZ59|A0A0A0KZ59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499300 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-45
Identity = 164/186 (88.17%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH
Sbjct: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
                QTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR
Sbjct: 121 XXXXXQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 174

Query: 181 TGGSYT 187
           TGGSYT
Sbjct: 181 TGGSYT 174

[Close]

BLAST of CsGy4G019010 vs. TrEMBL
Match: tr|A0A1S3B5R4|A0A1S3B5R4_CUCME (18 kDa seed maturation protein OS=Cucumis melo OX=3656 GN=LOC103486081 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.1e-38
Identity = 155/189 (82.01%), Postives = 157/189 (83.07%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQSGKKA+ES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH
Sbjct: 1   MQSGKKAMESVKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGTGYGTGTR 180
                   ALPGHGTGQPTG VTEGVVG HPIGT TGTGRTTTAHNPLAGG TGYGTGTR
Sbjct: 121 XXXXXXXXALPGHGTGQPTGPVTEGVVGVHPIGTATGTGRTTTAHNPLAGGETGYGTGTR 177

Query: 181 ---TGGSYT 187
              TGGSYT
Sbjct: 181 TGGTGGSYT 177

[Close]

BLAST of CsGy4G019010 vs. TrEMBL
Match: tr|V7CVX7|V7CVX7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G143100g PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.8e-28
Identity = 91/186 (48.92%), Postives = 107/186 (57.53%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQ GKKA ES+KE+A+N+ ASAKAGM+KTKATVQEK E++TARDPL KE+A +KKEA+++
Sbjct: 1   MQGGKKAGESVKETASNMGASAKAGMEKTKATVQEKAERLTARDPLQKEVATQKKEARVN 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                                                                  G HG+
Sbjct: 61  ------------------------------QAELDKQAVREHNAAAKQSATHSATGEHGH 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGG-TGYGTGT 180
            TG  QTSA+PGHGTGQPTG VTEGVVG+HPIGT  G G TTTAHN  AGG    YG G 
Sbjct: 121 HTGLHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTTTAHNTHAGGNPNDYGYG- 154

Query: 181 RTGGSY 186
            TGG+Y
Sbjct: 181 -TGGTY 154

[Close]

BLAST of CsGy4G019010 vs. TrEMBL
Match: tr|Q9FNW9|Q9FNW9_GLYTA (Seed maturation protein LEA 4 OS=Glycine tabacina OX=44016 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.7e-27
Identity = 89/181 (49.17%), Postives = 101/181 (55.80%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQ GKKA ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KKEAK+ 
Sbjct: 1   MQGGKKAGESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPMQKELATQKKEAKM- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                                X                                 G HG 
Sbjct: 61  --------------SQAELDKXAARQHNTAAKQAATAGHMGQGHNTPGTATYSTTGEHGQ 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGT---GYGT 179
             G  QTSA+PGHGTGQPTG VTEGVVG+HPIGT  G G T TAHN  AGG     GYGT
Sbjct: 121 PMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGT 166

[Close]

BLAST of CsGy4G019010 vs. TrEMBL
Match: tr|Q9FT28|Q9FT28_GLYTO (Seed maturation protein OS=Glycine tomentella OX=44015 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.9e-27
Identity = 88/181 (48.62%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 1   MQSGKKAVESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKEAKIH 60
           MQ GKKA ES+KE+AAN+ ASAKAGM+KTKATVQEK E++TARDP+ +E+A +KKEAKI 
Sbjct: 1   MQGGKKAGESIKETAANIGASAKAGMEKTKATVQEKAERMTARDPVQRELATQKKEAKI- 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHGY 120
                                                                  G HG 
Sbjct: 61  --------------SQAELDKQAARQHNTAAKQAATAGHMGQGHHTPGTATYSTTGEHGQ 120

Query: 121 TTGTQQTSALPGHGTGQPTGLVTEGVVGAHPIGTETGTGRTTTAHNPLAGGGT---GYGT 179
             G  QTSA+PGHGTGQPTG VTEGVVG+HPIGT  G G T TAHN  AGG     GYGT
Sbjct: 121 PMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGNPNDYGYGT 166

The following BLAST results are available for this feature:

BLAST of CsGy4G019010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146409.1	4.6e-45	88.17	PREDICTED: 18 kDa seed maturation protein [Cucumis sativus] >KGN54793.1 hypothet...	[more]
XP_022924969.1	6.4e-39	74.73	late embryogenesis abundant protein 46 [Cucurbita moschata] >XP_023518250.1 late...	[more]
XP_008442129.1	9.3e-38	82.01	PREDICTED: 18 kDa seed maturation protein [Cucumis melo]	[more]
XP_022966467.1	1.6e-37	77.96	late embryogenesis abundant protein 46 [Cucurbita maxima]	[more]
XP_007162333.1	8.7e-28	48.92	hypothetical protein PHAVU_001G143100g [Phaseolus vulgaris] >ESW34327.1 hypothet...	[more]

BLAST of CsGy4G019010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06760.1	1.3e-09	40.88	Late Embryogenesis Abundant 4-5	[more]

BLAST of CsGy4G019010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q01417\|PM1_SOYBN	3.5e-28	55.25	18 kDa seed maturation protein OS=Glycine max OX=3847 GN=GMPM1 PE=2 SV=1	[more]
sp\|Q9FG31\|LEA46_ARATH	2.3e-08	40.88	Late embryogenesis abundant protein 46 OS=Arabidopsis thaliana OX=3702 GN=LEA46 ...	[more]
sp\|Q00747\|LE25_SOLLC	6.4e-06	57.45	Protein LE25 OS=Solanum lycopersicum OX=4081 GN=LE25 PE=2 SV=1	[more]

BLAST of CsGy4G019010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZ59\|A0A0A0KZ59_CUCSA	3.0e-45	88.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499300 PE=4 SV=1	[more]
tr\|A0A1S3B5R4\|A0A1S3B5R4_CUCME	6.1e-38	82.01	18 kDa seed maturation protein OS=Cucumis melo OX=3656 GN=LOC103486081 PE=4 SV=1	[more]
tr\|V7CVX7\|V7CVX7_PHAVU	5.8e-28	48.92	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G143100g PE=4 ...	[more]
tr\|Q9FNW9\|Q9FNW9_GLYTA	3.7e-27	49.17	Seed maturation protein LEA 4 OS=Glycine tabacina OX=44016 PE=4 SV=1	[more]
tr\|Q9FT28\|Q9FT28_GLYTO	4.9e-27	48.62	Seed maturation protein OS=Glycine tomentella OX=44015 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009793	embryo development ending in seed dormancy

Vocabulary: **INTERPRO**
Term	Definition
IPR005513	LEA_1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009409	response to cold
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0048030	disaccharide binding
molecular_function	GO:0031210	phosphatidylcholine binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G019010.1	CsGy4G019010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..186
None	No IPR available	PANTHER	PTHR33493:SF2	LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5	coord: 1..183
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PFAM	PF03760	LEA_1	coord: 9..77 e-value: 6.0E-22 score: 78.0
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PANTHER	PTHR33493	FAMILY NOT NAMED	coord: 1..183
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PRODOM	PD005538		coord: 10..78 e-value: 2.0E-8 score: 138.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G019010	Cla011668	Watermelon (97103) v1	cgybwmB316
CsGy4G019010	Csa4G499300	Cucumber (Chinese Long) v2	cgybcuB173
CsGy4G019010	ClCG04G002110	Watermelon (Charleston Gray)	cgybwcgB283
CsGy4G019010	CSPI04G20470	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G019010	CmaCh07G012440	Cucurbita maxima (Rimu)	cgybcmaB576
CsGy4G019010	CmoCh07G012900	Cucurbita moschata (Rifu)	cgybcmoB550
CsGy4G019010	Lsi01G019980	Bottle gourd (USVL1VR-Ls)	cgyblsiB243
CsGy4G019010	Cp4.1LG19g01360	Cucurbita pepo (Zucchini)	cgybcpeB529
CsGy4G019010	MELO3C008930.2	Melon (DHL92) v3.6.1	cgybmedB285
CsGy4G019010	CsaV3_4G030630	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G019010	Cla97C04G069720	Watermelon (97103) v2	cgybwmbB283
CsGy4G019010	Bhi03G002346	Wax gourd	cgybwgoB375
CsGy4G019010	Carg12677	Silver-seed gourd	carcgybB0301

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G019010	Cucurbita maxima (Rimu)	cgybcmaB530
CsGy4G019010	Cucurbita maxima (Rimu)	cgybcmaB564
CsGy4G019010	Cucurbita moschata (Rifu)	cgybcmoB504
CsGy4G019010	Cucurbita moschata (Rifu)	cgybcmoB539
CsGy4G019010	Cucurbita pepo (Zucchini)	cgybcpeB465
CsGy4G019010	Melon (DHL92) v3.5.1	cgybmeB285
CsGy4G019010	Silver-seed gourd	carcgybB0297
CsGy4G019010	Silver-seed gourd	carcgybB0532