CsGy4G006830 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G006830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NDR1/HIN1-like protein 12
Location	Chr4 : 4935270 .. 4935872 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTCATCCCCTCGTTTGGCTCGCTGCCTTACTCTGCACCGTTGTTTCAATTGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGTCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCATGCCAGTTTCTCGGATTCGAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAATGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAAGTATGAATGTCATCTTCATTGTGGGCTTAAATTTCATCCTTCTAATGGAACTTATTTGAGTTCTCCATGCAGTTCCAGAGTTAAATGA

mRNA sequence

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTCATCCCCTCGTTTGGCTCGCTGCCTTACTCTGCACCGTTGTTTCAATTGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGTCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCATGCCAGTTTCTCGGATTCGAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAATGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAAGTATGAATGTCATCTTCATTGTGGGCTTAAATTTCATCCTTCTAATGGAACTTATTTGAGTTCTCCATGCAGTTCCAGAGTTAAATGA

Coding sequence (CDS)

ATGCCACCCAAACTAATCTCCGACGCAAAGCGCCACACTCATCCCCTCGTTTGGCTCGCTGCCTTACTCTGCACCGTTGTTTCAATTGCCGTCATCATCGGAGGCATCGTCGTCTTCATCGGTTACCTAGTCATCCACCCTAGGATTCCCACCATCTCCATTCTCGACGCTCATCTCGACAACTTCCAAATTGACATCGCCGGTCGCCTCGAAGTTCAGTTAACGATCATCATTGAAGCGAAGAATGATAACGCGAAAGCTCATGCCAGTTTCTCGGATTCGAGTTTCTTCCTCCATTTCTTAGGGATCAAGATCGCACAACTTGTGGCGGATCCATTCGAAGTGAGGAAGAACAGTTCAATGAAATTCCCTTACGCTGTTGTTTCGAATTCAATTCCTCTGAATCCAGAGCAAATGGAGAGCGTTGATTCTGATTTGAAGGCAGATCTGAGTCGATTTGATTTGATAGGGAATACGAGAGTTCAATGGCGAGTTGGATTGCTTGGATCTGTGAAGTATGAATGTCATCTTCATTGTGGGCTTAAATTTCATCCTTCTAATGGAACTTATTTGAGTTCTCCATGCAGTTCCAGAGTTAAATGA

Protein sequence

MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSMKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCGLKFHPSNGTYLSSPCSSRVK

Homology

[Close]

BLAST of CsGy4G006830 vs. NCBI nr
Match: XP_004150550.1 (PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hypothetical protein Csa_4G056550 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 2.4e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTYLSSPCSSRVK
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of CsGy4G006830 vs. NCBI nr
Match: XP_008451870.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 3.2e-100
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           MKF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSVKYECHLHC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTYL SPCSSRVK
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

[Close]

BLAST of CsGy4G006830 vs. NCBI nr
Match: XP_022931289.1 (uncharacterized protein LOC111437517 [Cucurbita moschata] >XP_023552821.1 uncharacterized protein LOC111810341 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 6.0e-91
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQ DIAGRLEVQLT++++A+NDNAKAHASFSD+SFFLHFLGIKIAQLVA  F+VRKNSS
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           +  PY V SNSIPL PEQME VD  LK+D+SRFDLIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTY S PCSSR K
Sbjct: 181 LKFHPSNGTYFSPPCSSRAK 200

[Close]

BLAST of CsGy4G006830 vs. NCBI nr
Match: XP_022136394.1 (uncharacterized protein LOC111008115 [Momordica charantia])

HSP 1 Score: 339.7 bits (870), Expect = 6.6e-90
Identity = 163/200 (81.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPP+LISDAKR THPLVW AA+LCT++SIAVIIGGIVVF+GYLVIHPRIPTIS++ AHLD
Sbjct: 1   MPPRLISDAKRRTHPLVWFAAVLCTILSIAVIIGGIVVFVGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
            FQID+AGRLEVQLTI++EA+NDNAKAHASFSD+SFFL FLGI+IA+LVADPF VRKNSS
Sbjct: 61  GFQIDVAGRLEVQLTIVVEAENDNAKAHASFSDTSFFLSFLGIRIARLVADPFAVRKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
            KF YA+ S+SIPLNPEQME  D  LK+DLSRFDL GNTRVQWRVG+LGSVKY CHLHC 
Sbjct: 121 HKFQYAIASSSIPLNPEQMEEADYALKSDLSRFDLKGNTRVQWRVGMLGSVKYWCHLHCE 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTYLS PCSS+ K
Sbjct: 181 LKFHPSNGTYLSLPCSSKAK 200

[Close]

BLAST of CsGy4G006830 vs. NCBI nr
Match: XP_022985334.1 (uncharacterized protein LOC111483375 [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 1.1e-89
Identity = 165/200 (82.50%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I I+DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGIIDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQ DIAGRLEVQLT++++A+NDNAKAHASFSD+SFFLHFLGIKIAQLVA  F+VRKN S
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNGS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           +   Y V SNSIPL PEQME VD  LK+D+SRFDLIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 LMLHYEVASNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTY S PCSSR K
Sbjct: 181 LKFHPSNGTYFSPPCSSRAK 200

[Close]

BLAST of CsGy4G006830 vs. TAIR10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 214.2 bits (544), Expect = 7.6e-56
Identity = 106/198 (53.54%), Postives = 139/198 (70.20%), Query Frame = 0


Query: 3   PKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNF 62
           P+L S  +  T P +W AA++C ++SI VI+GGI+VF+GYLVIHPR+P IS+ DAHLD  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSMK 122
           + DI G L+ QLTI+I  +NDNAKAHA F ++ F L + G  IA L A  FEV K  SM 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 FPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCGLK 182
            PY V S  IPLNP  M++VD  +K D+  F+L G +R +WRVG LGSVK+EC+L C L+
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLR 181

Query: 183 FHPSNGTYLSSPCSSRVK 201
           F PS+ +Y+ SPC+S  K
Sbjct: 182 FRPSDHSYIPSPCTSAHK 197

[Close]

BLAST of CsGy4G006830 vs. TAIR10
Match: AT3G26350.1 (LOCATED IN: chloroplast)

HSP 1 Score: 90.9 bits (224), Expect = 9.7e-19
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 0


Query: 11  RHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRL 70
           R T+ + W AA  C +  + +I+GG+++ I YLV  PR P + I  A+L+   +D+   L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSMKFPYAVVSN 130
              LTI+    N + K+   FS  +F L++    IA    +PF+V K +SM     +VS+
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 131 SIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCGLKFH-PSNGT 190
            + L   Q   +   ++      +L G    +  +G L    Y+ H HC +  + P  G 
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLGA 346

Query: 191 YLSSPCSSR 199
             +  C+++
Sbjct: 347 MRARRCNTK 355

[Close]

BLAST of CsGy4G006830 vs. TAIR10
Match: AT1G13050.1 (unknown protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-11
Identity = 46/189 (24.34%), Postives = 79/189 (41.80%), Query Frame = 0


Query: 11  RHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLDNFQIDIAGRL 70
           + T P+   A + C          G+++ + YL   PR P   I  A L+   +D+   L
Sbjct: 128 KRTKPMTLPATICCXXXXXXXXXSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSSMKFPYAVVSN 130
              L +++   N + K+   FS   F L+F    IA    +PF V K  SM   + +VS+
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSS 247

Query: 131 SIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCGLKFH-PSNGT 190
            + +   Q + +   L       +L G    +  +G L    Y  H  C +  + P  GT
Sbjct: 248 QVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGT 307

Query: 191 YLSSPCSSR 199
             +  C+++
Sbjct: 308 MRARRCNTK 316

[Close]

BLAST of CsGy4G006830 vs. TrEMBL
Match: tr|A0A0A0KX91|A0A0A0KX91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.6e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTYLSSPCSSRVK
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of CsGy4G006830 vs. TrEMBL
Match: tr|A0A1S3BSH0|A0A1S3BSH0_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.1e-100
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
           NFQIDIAGRLEVQLTI++EAKNDNAKAHASFSDSSFFLHFL IKIAQLVADPFEV+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           MKF YAV SNSIPLNPEQME+VD DLKADLS F LIGNTRVQWRVGLLGSVKYECHLHC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNGTYL SPCSSRVK
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

[Close]

BLAST of CsGy4G006830 vs. TrEMBL
Match: tr|W9SWL3|W9SWL3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.6e-68
Identity = 126/200 (63.00%), Postives = 163/200 (81.50%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MP KLI   ++ THP++W  A++CTVV+IAVII G+VVF+GYLVIHP +P IS++ AHLD
Sbjct: 1   MPGKLIQGPEKATHPVIWCLAIVCTVVAIAVIITGLVVFVGYLVIHPSVPIISVVSAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
             Q DIAG LE +LT++++A+N+NAKAHASFSD+SFFL F GI IA+LVA+PFEV KN S
Sbjct: 61  KLQNDIAGLLEAELTVVVKAENENAKAHASFSDTSFFLSFQGIVIAKLVAEPFEVAKNDS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           ++ PY V+S+SIPLNPE+M+ VD  LK D   FDL G++R +WRVGLLGSVK+ C+L+C 
Sbjct: 121 LQLPYKVLSSSIPLNPEEMQQVDMALKDDRITFDLKGHSRARWRVGLLGSVKFWCNLNCQ 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHP  G+Y+SSPC+SR K
Sbjct: 181 LKFHPLTGSYMSSPCTSRAK 200

[Close]

BLAST of CsGy4G006830 vs. TrEMBL
Match: tr|V4T9C5|V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003495mg PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-64
Identity = 123/200 (61.50%), Postives = 152/200 (76.00%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPK     +R THPL+WL A++CT+++IAVII GIVVF GYLV+HPRIP +S++ AHLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
            FQ D AG LE Q+TI+I  +N NAKA ASFSD+S +L F G+KIAQLVADPFEV KNSS
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           + F Y V S  +PL+PE  E  D+ LK D+ RFDL G +R +WR+G+LGSVK+ C L C 
Sbjct: 121 VDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQ 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNG+Y+ S CSS  K
Sbjct: 181 LKFHPSNGSYIPSRCSSTTK 200

[Close]

BLAST of CsGy4G006830 vs. TrEMBL
Match: tr|A0A067DL89|A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029005mg PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-64
Identity = 123/200 (61.50%), Postives = 152/200 (76.00%), Query Frame = 0


Query: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60
           MPPK     +R THPL+WL A++CT+++IAVII GIVVF GYLV+HPRIP +S++ AHLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120
            FQ D AG LE Q+TI+I  +N NAKA ASFSD+S +L F G+KIAQLVADPFEV KNSS
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSS 120

Query: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180
           + F Y V S  +PL+PE  E  D+ LK D+ RFDL G +R +WR+G+LGSVK+ C L C 
Sbjct: 121 VDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIGVLGSVKFWCRLDCQ 180

Query: 181 LKFHPSNGTYLSSPCSSRVK 201
           LKFHPSNG+Y+ S CSS  K
Sbjct: 181 LKFHPSNGSYIPSRCSSTTK 200

The following BLAST results are available for this feature:

BLAST of CsGy4G006830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150550.1	2.4e-108	100.00	PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hy...	[more]
XP_008451870.1	3.2e-100	93.50	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]
XP_022931289.1	6.0e-91	83.00	uncharacterized protein LOC111437517 [Cucurbita moschata] >XP_023552821.1 unchar...	[more]
XP_022136394.1	6.6e-90	81.50	uncharacterized protein LOC111008115 [Momordica charantia]	[more]
XP_022985334.1	1.1e-89	82.50	uncharacterized protein LOC111483375 [Cucurbita maxima]	[more]

BLAST of CsGy4G006830 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	7.6e-56	53.54	FUNCTIONS IN: molecular_function unknown	[more]
AT3G26350.1	9.7e-19	28.04	LOCATED IN: chloroplast	[more]
AT1G13050.1	3.3e-11	24.34	unknown protein	[more]

BLAST of CsGy4G006830 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy4G006830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KX91\|A0A0A0KX91_CUCSA	1.6e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1	[more]
tr\|A0A1S3BSH0\|A0A1S3BSH0_CUCME	2.1e-100	93.50	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1	[more]
tr\|W9SWL3\|W9SWL3_9ROSA	1.6e-68	63.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1	[more]
tr\|V4T9C5\|V4T9C5_9ROSI	1.8e-64	61.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003495mg PE=4 ...	[more]
tr\|A0A067DL89\|A0A067DL89_CITSI	1.8e-64	61.50	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029005mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G006830.1	CsGy4G006830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 8..198
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 8..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G006830	Cla005461	Watermelon (97103) v1	cgybwmB289
CsGy4G006830	Csa4G056550	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G006830	MELO3C016214	Melon (DHL92) v3.5.1	cgybmeB255
CsGy4G006830	ClCG07G011150	Watermelon (Charleston Gray)	cgybwcgB302
CsGy4G006830	CSPI04G06890	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G006830	CmaCh16G005090	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G006830	CmaCh04G005980	Cucurbita maxima (Rimu)	cgybcmaB541
CsGy4G006830	CmoCh16G005550	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G006830	CmoCh04G006390	Cucurbita moschata (Rifu)	cgybcmoB515
CsGy4G006830	Lsi07G007730	Bottle gourd (USVL1VR-Ls)	cgyblsiB278
CsGy4G006830	Cp4.1LG01g01130	Cucurbita pepo (Zucchini)	cgybcpeB501
CsGy4G006830	Cp4.1LG14g02850	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G006830	MELO3C016214.2	Melon (DHL92) v3.6.1	cgybmedB254
CsGy4G006830	CsaV3_4G007100	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G006830	Cla97C07G137880	Watermelon (97103) v2	cgybwmbB304
CsGy4G006830	Bhi01G002353	Wax gourd	cgybwgoB352
CsGy4G006830	Carg13148	Silver-seed gourd	carcgybB0047
CsGy4G006830	Carg11423	Silver-seed gourd	carcgybB0652

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None