Carg13148 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13148
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_101 : 603728 .. 604330 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGCCGCCTCGAGGTTCATTTAACGATCCTCGTCGAGGCGGGGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAACGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTAAATTTCATCATTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGA

mRNA sequence

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGCCGCCTCGAGGTTCATTTAACGATCCTCGTCGAGGCGGGGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAACGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTAAATTTCATCATTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGA

Coding sequence (CDS)

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGCCGCCTCGAGGTTCATTTAACGATCCTCGTCGAGGCGGGGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAACGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTAAATTTCATCATTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGA

Protein sequence

MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

Homology

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BLAST of Carg13148 vs. NCBI nr
Match: XP_023526921.1 (uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.9 bits (964), Expect = 8.3e-101
Identity = 187/200 (93.50%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VI AHL+
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPMIRVIGAHLN 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQNDIAGRLEV LTILVEA NDNAKAHASFSDT LF SFLGLNIAELVADPFDVRKNSS
Sbjct: 61  NFQNDIAGRLEVQLTILVEAENDNAKAHASFSDTRLFKSFLGLNIAELVADPFDVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIKIPLNPEQMEEVDFVLKTDLIQFNLNGDTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           L+FHHSNGTYLISPCSSRAK
Sbjct: 181 LQFHHSNGTYLISPCSSRAK 200

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BLAST of Carg13148 vs. NCBI nr
Match: XP_022942740.1 (uncharacterized protein LOC111447688 [Cucurbita moschata])

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLD
Sbjct: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQN+IAGRLEV LTILVEA NDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKN S
Sbjct: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG
Sbjct: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180

Query: 181 LKFH 185
           LKFH
Sbjct: 181 LKFH 184

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BLAST of Carg13148 vs. NCBI nr
Match: XP_004150550.1 (PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hypothetical protein Csa_4G056550 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84
Identity = 156/200 (78.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEV LTI++EA NDNAKAHASFSD+S FL FLG+ IA+LVADPF+VRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           ++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVGL GSVK+ C +HCG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of Carg13148 vs. NCBI nr
Match: XP_022136394.1 (uncharacterized protein LOC111008115 [Momordica charantia])

HSP 1 Score: 319.3 bits (817), Expect = 9.2e-84
Identity = 155/200 (77.50%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIPTISVI AHLD
Sbjct: 1   MPPRLISDAKRRTHPLVWFAAVLCTILSIAVIIGGIVVFVGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
            FQ D+AGRLEV LTI+VEA NDNAKAHASFSDTS FLSFLG+ IA LVADPF VRKNSS
Sbjct: 61  GFQIDVAGRLEVQLTIVVEAENDNAKAHASFSDTSFFLSFLGIRIARLVADPFAVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
            +F YA+ S  IPLNPEQMEE D+ALK+DL +FDL GNTRVQWRVG+ GSVK+ C +HC 
Sbjct: 121 HKFQYAIASSSIPLNPEQMEEADYALKSDLSRFDLKGNTRVQWRVGMLGSVKYWCHLHCE 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH SNGTYL  PCSS+AK
Sbjct: 181 LKFHPSNGTYLSLPCSSKAK 200

[Close]

BLAST of Carg13148 vs. NCBI nr
Match: XP_008451870.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 7.8e-83
Identity = 155/200 (77.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEV LTI+VEA NDNAKAHASFSD+S FL FL + IA+LVADPF+V+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           ++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVGL GSVK+ C +HC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

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BLAST of Carg13148 vs. TAIR10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 200.7 bits (509), Expect = 8.7e-52
Identity = 101/198 (51.01%), Postives = 132/198 (66.67%), Query Frame = 0


Query: 3   PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNF 62
           P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P ISV DAHLD  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSSVQ 122
           + DI G L+  LTI++   NDNAKAHA F +T   LS+ G  IA L A  F+V K  S+ 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 FHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLK 182
             Y V S  IPLNP  M+ VD+A+K D+I F+L G +R +WRVG  GSVKF C + C L+
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLR 181

Query: 183 FHHSNGTYLISPCSSRAK 201
           F  S+ +Y+ SPC+S  K
Sbjct: 182 FRPSDHSYIPSPCTSAHK 197

[Close]

BLAST of Carg13148 vs. TAIR10
Match: AT3G26350.1 (LOCATED IN: chloroplast)

HSP 1 Score: 72.0 bits (175), Expect = 4.6e-13
Identity = 45/174 (25.86%), Postives = 78/174 (44.83%), Query Frame = 0


Query: 11  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRL 70
           R T+ + W AA  C +  + +I+ G+ + I YLV  PR P + +  A+L+    D+   L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSSVQFHYAVNSI 130
              LTIL    N + K+   FS  +  L +    IA    +PF V K +S+  +  + S 
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 131 MIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH 185
            + L   Q  E+   ++T  +  +L G    +  +G      +    HC +  +
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLN 340

[Close]

BLAST of Carg13148 vs. TAIR10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 44/167 (26.35%), Postives = 73/167 (43.71%), Query Frame = 0


Query: 12  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLE 71
           RT   IW  A  C + S+ +I   +   I +L I PRIP   + +A+L     D      
Sbjct: 81  RTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIRPRIPVFDIPNANLHTIYFDTPEFFN 140

Query: 72  VHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSSVQFHYAVNSIM 131
             L++LV   N N K    F    + L F    IA  V  PF  +K+ +      + S +
Sbjct: 141 GDLSMLVNFTNPNKKIEVKFEKLRIELFFFNRLIAAQVVQPFLQKKHETRLEPIRLISSL 200

Query: 132 IPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIH 179
           + L      E+   L+ + I++++ G  +V+     FG + +  Q+H
Sbjct: 201 VGLPVNHAVELRRQLENNKIEYEIRGTFKVK---AHFGMIHYSYQLH 244

[Close]

BLAST of Carg13148 vs. TrEMBL
Match: tr|A0A0A0KX91|A0A0A0KX91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 4.7e-84
Identity = 156/200 (78.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEV LTI++EA NDNAKAHASFSD+S FL FLG+ IA+LVADPF+VRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           ++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVGL GSVK+ C +HCG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of Carg13148 vs. TrEMBL
Match: tr|A0A1S3BSH0|A0A1S3BSH0_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 5.2e-83
Identity = 155/200 (77.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
           NFQ DIAGRLEV LTI+VEA NDNAKAHASFSD+S FL FL + IA+LVADPF+V+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           ++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVGL GSVK+ C +HC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH SNGTYL SPCSSR K
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

[Close]

BLAST of Carg13148 vs. TrEMBL
Match: tr|M5WBE7|M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 124/191 (64.92%), Postives = 154/191 (80.63%), Query Frame = 0


Query: 10  KRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGR 69
           +R THPL+WFAAV+CT+++IAVIIAG+ +F GY++IHPR+P I+V  AHLDNFQN +AG 
Sbjct: 11  QRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQNSVAGL 70

Query: 70  LEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSSVQFHYAVNS 129
           L+  +TI+V+A NDN KAHASFSDTS  LSF GLNIA LVA PFDV+KNSSV FHY V S
Sbjct: 71  LDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVALPFDVKKNSSVDFHYLVQS 130

Query: 130 IMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGT 189
             IPL+PEQM+++D +LK D I F+L GN R +WRVG  GSVKF   ++C L+FH SNG+
Sbjct: 131 SSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRFHPSNGS 190

Query: 190 YLISPCSSRAK 201
           Y+ SPCSSRAK
Sbjct: 191 YIHSPCSSRAK 201

[Close]

BLAST of Carg13148 vs. TrEMBL
Match: tr|W9SWL3|W9SWL3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.2e-67
Identity = 126/200 (63.00%), Postives = 157/200 (78.50%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MP KLI   ++ THP+IW  A++CT+V+IAVII G+ VF+GYLVIHP +P ISV+ AHLD
Sbjct: 1   MPGKLIQGPEKATHPVIWCLAIVCTVVAIAVIITGLVVFVGYLVIHPSVPIISVVSAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
             QNDIAG LE  LT++V+A N+NAKAHASFSDTS FLSF G+ IA+LVA+PF+V KN S
Sbjct: 61  KLQNDIAGLLEAELTVVVKAENENAKAHASFSDTSFFLSFQGIVIAKLVAEPFEVAKNDS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           +Q  Y V S  IPLNPE+M++VD ALK D I FDL G++R +WRVGL GSVKF C ++C 
Sbjct: 121 LQLPYKVLSSSIPLNPEEMQQVDMALKDDRITFDLKGHSRARWRVGLLGSVKFWCNLNCQ 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           LKFH   G+Y+ SPC+SRAK
Sbjct: 181 LKFHPLTGSYMSSPCTSRAK 200

[Close]

BLAST of Carg13148 vs. TrEMBL
Match: tr|A0A2P6PBD4|A0A2P6PBD4_ROSCH (Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0215061 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.1e-64
Identity = 122/200 (61.00%), Postives = 152/200 (76.00%), Query Frame = 0


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLD 60
           MP KLI   +R THPL+W AA++CT++SIAVIIAG+ VF+GY+VIHPR+P I V  AHLD
Sbjct: 1   MPRKLIHGPQRGTHPLVWLAAIICTIISIAVIIAGIVVFVGYMVIHPRVPFIKVTTAHLD 60

Query: 61  NFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNSS 120
            F++D    L+  +TI+V A NDN KAHASFSDTS  LSF G+NIA+LVA PF+VRKNSS
Sbjct: 61  KFESDATSLLDTAITIVVRAENDNTKAHASFSDTSFTLSFQGMNIAKLVAYPFEVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCG 180
           V F+Y V S  IPL+ EQ+++VD +LK D I FDL GN R +WRV L GS+KF   ++C 
Sbjct: 121 VDFNYVVESSSIPLSSEQVDQVDNSLKRDRISFDLKGNVRARWRVWLLGSIKFWGHLNCR 180

Query: 181 LKFHHSNGTYLISPCSSRAK 201
           L FH  NG+Y+ SPCSSRAK
Sbjct: 181 LNFHAFNGSYIYSPCSSRAK 200

The following BLAST results are available for this feature:

BLAST of Carg13148 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526921.1	8.3e-101	93.50	uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo]	[more]
XP_022942740.1	1.0e-95	97.28	uncharacterized protein LOC111447688 [Cucurbita moschata]	[more]
XP_004150550.1	7.1e-84	78.00	PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hy...	[more]
XP_022136394.1	9.2e-84	77.50	uncharacterized protein LOC111008115 [Momordica charantia]	[more]
XP_008451870.1	7.8e-83	77.50	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]

BLAST of Carg13148 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	8.7e-52	51.01	FUNCTIONS IN: molecular_function unknown	[more]
AT3G26350.1	4.6e-13	25.86	LOCATED IN: chloroplast	[more]
AT4G26490.1	3.7e-10	26.35	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

BLAST of Carg13148 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg13148 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KX91\|A0A0A0KX91_CUCSA	4.7e-84	78.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1	[more]
tr\|A0A1S3BSH0\|A0A1S3BSH0_CUCME	5.2e-83	77.50	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1	[more]
tr\|M5WBE7\|M5WBE7_PRUPE	1.8e-67	64.92	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1	[more]
tr\|W9SWL3\|W9SWL3_9ROSA	5.2e-67	63.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1	[more]
tr\|A0A2P6PBD4\|A0A2P6PBD4_ROSCH	3.1e-64	61.00	Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13148-RA	Carg13148-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 7..198
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 7..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13148	Cla005461	Watermelon (97103) v1	carwmB0043
Carg13148	Csa4G056550	Cucumber (Chinese Long) v2	carcuB0047
Carg13148	MELO3C016214	Melon (DHL92) v3.5.1	carmeB0044
Carg13148	ClCG07G011150	Watermelon (Charleston Gray)	carwcgB0046
Carg13148	CSPI04G06890	Wild cucumber (PI 183967)	carcpiB0051
Carg13148	CmaCh16G005090	Cucurbita maxima (Rimu)	carcmaB0052
Carg13148	CmaCh04G005980	Cucurbita maxima (Rimu)	carcmaB0055
Carg13148	CmoCh16G005550	Cucurbita moschata (Rifu)	carcmoB0054
Carg13148	CmoCh04G006390	Cucurbita moschata (Rifu)	carcmoB0058
Carg13148	Lsi07G007730	Bottle gourd (USVL1VR-Ls)	carlsiB043
Carg13148	Cp4.1LG01g01130	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13148	Cp4.1LG14g02850	Cucurbita pepo (Zucchini)	carcpeB0057
Carg13148	CsGy4G006830	Cucumber (Gy14) v2	carcgybB0047
Carg13148	MELO3C016214.2	Melon (DHL92) v3.6.1	carmedB0047
Carg13148	CsaV3_4G007100	Cucumber (Chinese Long) v3	carcucB0052
Carg13148	Cla97C07G137880	Watermelon (97103) v2	carwmbB0043
Carg13148	Bhi01G002353	Wax gourd	carwgoB0053

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13148	Carg11423	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13148	Melon (DHL92) v3.6.1	carmedB0045
Carg13148	Cucumber (Gy14) v1	carcgyB0053
Carg13148	Melon (DHL92) v3.5.1	carmeB0042