CmoCh04G006390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Late embryogenesis abundant protein
Location	Cmo_Chr04 : 3165785 .. 3169784 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGGCGCTCATCTTGATAACTTCCAGAACGAAATCGCCGGCCGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACGGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAATGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTTGTATGCCAAATTCATTGCGGGCTTAAATTTCATCGTTCCTGTGAATGTTTGCTGAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGGAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATGGTAATAAGGCAAATGTTAGATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATCCTTAACACCCCACCGCAAGCTGAACGTCGGATTTGAACGAACGTGAAGCTTGAATCTGAAAAATTGAAAGTGGTTGAGAAACACTTTTCGTGAAGATGTCAACAACCTGGTTCAGAGGAGGAGTAAAGAAACACTTTCTTGGCCATCGAAAATTGCAGAGGGATCGCCGCTCAGCGGCGATGCTGCCTTGGCTTCGACGAGAATATGTCTACCCATAAACAGGAATTGTCGCTTAGCGACGATGTTACCTTGGCTCTGGTGAGAATATGTCTAACCCCAAGAAGTAGAAGGGGAAACCTAGAGAAAGGGACAAAGACAATGTTGAAGCCGGAAGAGTCGCCACATTGGGCGAAGGAGCCAATTTTGGCAAAAAGGGCAGCCGGAAGAGTCGCCACATTGGGGCGAAGGAGCCAATTTTGGCGAGAAGGGCGGCAGCAACTTGGTTGGCGAAGATGCCAGTGCGGCGCCTAGATTCCAAAGGTGAATCTCTGCAAAAGGTCGATAGGCTTATCGAGATTCTGTATATTTTCGAAGAGAAATGCTGATGAAGATCCTAAGATTAGGGTTTCTGTGAAGGATGAAGGATAAAGGAAAAATTGAGAAGAGAATGAAAGAGACTATGTTTGAAAAATGTAAGGTTGTATGTACAGAGTATGGTGAAGGATGATTTGGAGGTCAATAGGGTGGAGCCGAAGAGTAATTAATCGGCTCCGCCTGCGGTAGCCATGAAGACTGCTCCTGCGGCGTCAAAGGCAACAGGGGTGGTGGAGAAGAACAGTAGAAGATTTCAAAAGCCATTGAAAAGAAAGGATTTGGGGTTGTTAAACCGAAGGGGCTCTGATACCATGTGAATGTTTGCTGAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGGAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATGGTAATAAGGCAAATGTTAGATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATCCTTAACAGTTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGATTTCTCTGTTCTTGGGATAGTTTTAGTACAGAACAATTTCATTCCATTTCTTGGAAAATTAGACGATTCATAGTGCGTATTGAGAATTTTTGTTAGATTTAGATTAGCGAAATTGAGTTATATAATTTGTAAAATTATTTGAGTTATCTCGGATTTGAATTTAGTTAATATTAAATTAAATGGTTGTTTTTAGTGACATTATTTATATTTTTTATCGAAATTATAATGTCCTAATCAGTCGAATATAACGACAAAGTGAATAATTTTGTTGTATTAAAAGAAAAAAAATAATGGAGTATAATTATTAATAGACCCAATAATTAAATTTACAAAGAATAATTGAGATGATTTTATTAATGAACTAATTAAAAAAAAAATCCCAGCTTGATTTTGTTGCCTACGATTGGATGCTACAGACTGTAAATTCATAATGATTTTATTCAATTTTAATGCCATTATTGAATAATTAGTGGAAACTTTTTGTAAAATATTTTTTTAAAAAAAGTATTGATTTTCAGGACCTATATTTAGCATTTAAAAAATGGGTAAAATATGCTGTCAAAAGTTTTAATTTGTAGGGTAAATTTATAGCACTAGTTATTCTTATACTTTAAAATTTTCAATTTTACCCTTTAAATCTTTAATTATTTACTAGATTAATATAATAAATAATTTACAATATATGCATGGATGGCATAAGGCATGAATCTAACAAATTGACAAAACCAGCTAATTGACTCATTGATCTTTATATTGGCTCGATTTTCTTGAATATAAATTTAAAAAATAATTCGATGAATTTAGCTTTAGGTTGATATGGAGTAGTTTTGTGGGCGATTTTATAGATATGTTTAAAAGATTTGATTTTGACATTGGTATCAAGAATAAAATATTAGAAAGACAGAAAGCTAATTCGAGCATGCTCGGGATAGGACACTACTATCTCAAAAGTCCGTAATTTTATCTTCACTTCATAATTACCGAACTAATATATATATATATATATATATATTAAAGGAGGTCAAATATGTTGTGCCGCTAGGCTAAAAAGGCAAATTAGAGCAGCGGCCATTGCCCCTAAACCAACGAACAAATGCGGTCCCCTAATATTGGAAAGGATAAAAAGTTTACATCAAAATCCAGTTTTATTATATTCCCTTTTCTAGGTTCGTTCTTTTAATTATATTCATAATTTAAATACTTTTTGTTGATGGAGGACGGTACGTCTTATTTAATTATGTGATACTCAAAATAAATGAGGGATATATGAATAAACCAAGATCATATTCGAATGAGAGCAATTATGAGAATAAAATGACTAACAAAGTCTTGAATTGAAAGTCATTATCTATATTAACTATGTGCATCTTTTTTTAAGATATATTTAATATAAACTTAAGAATAATTTAGACTATTATTATTTAAATACTCGGTTTTTTTTTAATTAAAAAATCTTTTTTTATTGATAATTAACAATAATTTAGATATTAAATTTATAATTCAACCAATAATTTGAAAGGTAAGATTTGCTAGAAGATTTTGGAGCCGGGAAGAAATAAGGTCACAGGCTCTCCTCTGTTCCATAATATAGTGTAGCGACGATCATTGAGTGCGGGTGGACCCTCCAATGTTTCAGCCTATCACAGCCGTTAGATTGACGCGGCTTCTCAGTTGGCGGTAGACACGTGTCCTCATCGTCTTCGATTCTGGTTGCTATAAAGGCCCCTGAACCGGCCATGATTCTCCTCGCTCTGCATAGGGTTTAATCTCCGTCCTCTCTCTCTGTTTGCCTCTCCTTTCCGTCGCCTTAATCTTCCGCGGGCAATTTCTCGGCGTTGTTTCTTCTCAGTTATAACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCTGGTGTGCGTTTGCCGACGGCCGGCATCTCCTCATCTTCTTTTTCTGTTTTTCTCTGCTTCTATTTCTTTTACTTTTTGCTTCATTTCTCTTGCCGCCGTGTGGTTAAGCTTGTTCGGGAAATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTACCTTCCTACAGATCTCA

mRNA sequence

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGGCGCTCATCTTGATAACTTCCAGAACGAAATCGCCGGCCGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACGGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAATGGGAACACGAGAGTTCAATGGCGAGTTGGATTTTTTGTGGGCGATTTTATAGATATGTTTAAAAGATTTGATTTTGACATTGTTATAACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCTGGTGTGCGTTTGCCGACGGCCGGCATCTCCTCATCTTCTTTTTCTGTTTTTCTCTGCTTCTATTTCTTTTACTTTTTGCTTCATTTCTCTTGCCGCCGTGTGGTTAAGCTTGTTCGGGAAATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTACCTTCCTACAGATCTCA

Coding sequence (CDS)

ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGGCGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGGCGCTCATCTTGATAACTTCCAGAACGAAATCGCCGGCCGCCTCGAGGTTCAGTTAACGATCCTCGTCGAGGCGGAGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCTGAGCTTGTAGCCGATCCATTCGATGTGAGGAAGAACGGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAAGACGGATCTGATCCAGTTCGATTTGAATGGGAACACGAGAGTTCAATGGCGAGTTGGATTTTTTGTGGGCGATTTTATAGATATGTTTAAAAGATTTGATTTTGACATTGTTATAACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCTGGTGTGCGTTTGCCGACGGCCGGCATCTCCTCATCTTCTTTTTCTGTTTTTCTCTGCTTCTATTTCTTTTACTTTTTGCTTCATTTCTCTTGCCGCCGTGTGGTTAAGCTTGTTCGGGAAATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTACCTTCCTACAGATCTCA

Homology

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BLAST of CmoCh04G006390 vs. TrEMBL
Match: A0A0A0KX91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-66
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
           NFQ +IAGRLEVQLTI++EA+NDNAKAHASFSD+S FL FLG+ IA+LVADPF+VRKN S
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           ++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVG 166

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BLAST of CmoCh04G006390 vs. TrEMBL
Match: M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-55
Identity = 103/157 (65.61%), Postives = 129/157 (82.17%), Query Frame = 1


Query: 10  KRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGR 69
           +R THPL+WFAAV+CT+++IAVIIAG+ +F GY++IHPR+P I+V  AHLDNFQN +AG 
Sbjct: 11  QRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQNSVAGL 70

Query: 70  LEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQFHYAVNS 129
           L+ ++TI+V+AENDN KAHASFSDTS  LSF GLNIA LVA PFDV+KN SV FHY V S
Sbjct: 71  LDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVALPFDVKKNSSVDFHYLVQS 130

Query: 130 IMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
             IPL+PEQM+++D +LK D I F+L GN R +WRVG
Sbjct: 131 SSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVG 167

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BLAST of CmoCh04G006390 vs. TrEMBL
Match: W9SWL3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021339 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54
Identity = 105/166 (63.25%), Postives = 133/166 (80.12%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MP KLI   ++ THP+IW  A++CT+V+IAVII G+ VF+GYLVIHP +P ISV+ AHLD
Sbjct: 1   MPGKLIQGPEKATHPVIWCLAIVCTVVAIAVIITGLVVFVGYLVIHPSVPIISVVSAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
             QN+IAG LE +LT++V+AEN+NAKAHASFSDTS FLSF G+ IA+LVA+PF+V KN S
Sbjct: 61  KLQNDIAGLLEAELTVVVKAENENAKAHASFSDTSFFLSFQGIVIAKLVAEPFEVAKNDS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           +Q  Y V S  IPLNPE+M++VD ALK D I FDL G++R +WRVG
Sbjct: 121 LQLPYKVLSSSIPLNPEEMQQVDMALKDDRITFDLKGHSRARWRVG 166

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BLAST of CmoCh04G006390 vs. TrEMBL
Match: A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 9.4e-50
Identity = 98/166 (59.04%), Postives = 126/166 (75.90%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MPPK     +R THPLIW  A++CT+++IAVIIAG+ VF GYLV+HPRIP +SV+GAHLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
            FQ + AG LE Q+TI++   N NAKA ASFSDTS++L F GL IA+LVADPF+V KN S
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           V F+Y V S  +PL+PE  E  D +LK D+++FDL G +R +WR+G
Sbjct: 121 VDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIG 166

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BLAST of CmoCh04G006390 vs. TrEMBL
Match: V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 9.4e-50
Identity = 98/166 (59.04%), Postives = 126/166 (75.90%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MPPK     +R THPLIW  A++CT+++IAVIIAG+ VF GYLV+HPRIP +SV+GAHLD
Sbjct: 1   MPPKFFPPRRRITHPLIWLIAIICTILAIAVIIAGIVVFTGYLVMHPRIPVMSVVGAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
            FQ + AG LE Q+TI++   N NAKA ASFSDTS++L F GL IA+LVADPF+V KN S
Sbjct: 61  LFQYDEAGLLETQVTIVIRMRNGNAKAGASFSDTSVYLFFDGLKIAQLVADPFEVSKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           V F+Y V S  +PL+PE  E  D +LK D+++FDL G +R +WR+G
Sbjct: 121 VDFNYVVESRPVPLDPELQEFADTSLKKDVVRFDLKGGSRTRWRIG 166

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BLAST of CmoCh04G006390 vs. TAIR10
Match: AT5G45320.1 (AT5G45320.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 167.9 bits (424), Expect = 8.5e-42
Identity = 85/164 (51.83%), Postives = 111/164 (67.68%), Query Frame = 1


Query: 3   PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNF 62
           P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P ISV  AHLD  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQ 122
           + +I G L+ QLTI++  ENDNAKAHA F +T   LS+ G  IA L A  F+V K  S+ 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 FHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
             Y V S  IPLNP  M+ VD+A+K D+I F+L G +R +WRVG
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVG 163

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BLAST of CmoCh04G006390 vs. TAIR10
Match: AT5G56050.1 (AT5G56050.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-09
Identity = 41/154 (26.62%), Postives = 70/154 (45.45%), Query Frame = 1


Query: 12  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRLE 71
           RT+P IW  A LC + SI +I+ G+   I YL + PR P   +  A L+    E      
Sbjct: 95  RTNPWIWCGAALCFIFSILLIVFGIATLILYLAVKPRTPVFDISNAKLNTILFESPVYFN 154

Query: 72  VQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQ---FHYAVN 131
             + + +   N N K +  F +  + L F    IA     PF  ++NG  +        N
Sbjct: 155 GDMLLQLNFTNPNKKLNVRFENLMVELWFADTKIATQGVLPFS-QRNGKTRLEPIRLISN 214

Query: 132 SIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQ 163
            + +P+N   + E+   + ++ I +++  N RV+
Sbjct: 215 LVFLPVN--HILELRRQVTSNRIAYEIRSNFRVK 245

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BLAST of CmoCh04G006390 vs. TAIR10
Match: AT1G13050.1 (AT1G13050.1 unknown protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 38/156 (24.36%), Postives = 70/156 (44.87%), Query Frame = 1


Query: 11  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGRL 70
           +RT P+   A + C ++ I +I++G+ + + YL   PR P   +  A L+    ++   L
Sbjct: 128 KRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQFHYAVNSI 130
              L ++V   N + K+   FS     L F    IA    +PF V K  S+   + + S 
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSS 247

Query: 131 MIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
            + +   Q +++   L T  +  +L G    +  +G
Sbjct: 248 QVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLG 283

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BLAST of CmoCh04G006390 vs. NCBI nr
Match: gi|449465669|ref|XP_004150550.1| (PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus])

HSP 1 Score: 260.0 bits (663), Expect = 4.6e-66
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
           NFQ +IAGRLEVQLTI++EA+NDNAKAHASFSD+S FL FLG+ IA+LVADPF+VRKN S
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           ++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVG
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVG 166

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BLAST of CmoCh04G006390 vs. NCBI nr
Match: gi|659101939|ref|XP_008451870.1| (PREDICTED: uncharacterized protein LOC103493029 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 4.6e-66
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1


Query: 1   MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLD 60
           MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNEIAGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGS 120
           NFQ +IAGRLEVQLTI+VEA+NDNAKAHASFSD+S FL FL + IA+LVADPF+V+KN S
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 VQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
           ++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVG
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVG 166

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BLAST of CmoCh04G006390 vs. NCBI nr
Match: gi|1009158815|ref|XP_015897483.1| (PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba])

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 105/160 (65.62%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 9   AKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAG 68
           +++RTHPLIWFAA++C +++ AVIIAGVGVFIGY+VIHPR+P I+V+ AHLD  Q++IAG
Sbjct: 10  SEKRTHPLIWFAAIICAIIATAVIIAGVGVFIGYMVIHPRVPVIAVVDAHLDKIQSDIAG 69

Query: 69  RLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQFHYAVN 128
            LE Q+TIL++A+NDNAKAHASFSDTS  LSF G+ IA+LVA+PF+V+KN SV+F+Y V 
Sbjct: 70  LLETQVTILIKAQNDNAKAHASFSDTSFILSFQGMMIAKLVAEPFEVKKNDSVEFNYVVP 129

Query: 129 SIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF 169
           S  IPL P+QM+EVD ALK D I FDL GN+R +WR+G F
Sbjct: 130 SSSIPLTPDQMDEVDLALKQDKITFDLRGNSRARWRIGLF 169

[Close]

BLAST of CmoCh04G006390 vs. NCBI nr
Match: gi|595850056|ref|XP_007209845.1| (hypothetical protein PRUPE_ppa014689mg [Prunus persica])

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 103/157 (65.61%), Postives = 129/157 (82.17%), Query Frame = 1


Query: 10  KRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGR 69
           +R THPL+WFAAV+CT+++IAVIIAG+ +F GY++IHPR+P I+V  AHLDNFQN +AG 
Sbjct: 11  QRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQNSVAGL 70

Query: 70  LEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQFHYAVNS 129
           L+ ++TI+V+AENDN KAHASFSDTS  LSF GLNIA LVA PFDV+KN SV FHY V S
Sbjct: 71  LDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVALPFDVKKNSSVDFHYLVQS 130

Query: 130 IMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVG 167
             IPL+PEQM+++D +LK D I F+L GN R +WRVG
Sbjct: 131 SSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVG 167

[Close]

BLAST of CmoCh04G006390 vs. NCBI nr
Match: gi|645265122|ref|XP_008238002.1| (PREDICTED: uncharacterized protein LOC103336689 [Prunus mume])

HSP 1 Score: 223.8 bits (569), Expect = 3.7e-55
Identity = 103/159 (64.78%), Postives = 130/159 (81.76%), Query Frame = 1


Query: 10  KRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNEIAGR 69
           +R THPL+WFAAV+CT+++IAVII G+ VF+GY++IHPR+P I+V  AHLDNFQN +AG 
Sbjct: 11  QRATHPLVWFAAVICTVIAIAVIITGIVVFVGYMIIHPRVPFITVTSAHLDNFQNSVAGL 70

Query: 70  LEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAELVADPFDVRKNGSVQFHYAVNS 129
           L+ ++T++V AENDN KAHASFSDTS  LSF GLNIA LVA PFDV+KN SV FHY V S
Sbjct: 71  LDTEITLIVRAENDNPKAHASFSDTSFTLSFQGLNIARLVALPFDVKKNSSVDFHYLVQS 130

Query: 130 IMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGFF 169
             IPL+PEQM+++D +LK D I F+L GN+R +WRVG F
Sbjct: 131 SSIPLSPEQMDQIDISLKRDKISFNLKGNSRARWRVGPF 169

The following BLAST results are available for this feature:

BLAST of CmoCh04G006390 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G006390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX91_CUCSA	3.2e-66	77.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056550 PE=4 SV=1	[more]
M5WBE7_PRUPE	1.5e-55	65.61	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1	[more]
W9SWL3_9ROSA	6.3e-54	63.25	Uncharacterized protein OS=Morus notabilis GN=L484_021339 PE=4 SV=1	[more]
A0A067DL89_CITSI	9.4e-50	59.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1	[more]
V4T9C5_9ROSI	9.4e-50	59.04	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1	[more]

BLAST of CmoCh04G006390 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	8.5e-42	51.83	FUNCTIONS IN: molecular_function unknown	[more]
AT5G56050.1	3.2e-09	26.62	FUNCTIONS IN: molecular_function unknown	[more]
AT1G13050.1	3.6e-08	24.36	unknown protein	[more]

BLAST of CmoCh04G006390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465669\|ref\|XP_004150550.1\|	4.6e-66	77.11	PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus]	[more]
gi\|659101939\|ref\|XP_008451870.1\|	4.6e-66	77.11	PREDICTED: uncharacterized protein LOC103493029 [Cucumis melo]	[more]
gi\|1009158815\|ref\|XP_015897483.1\|	1.5e-56	65.63	PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba]	[more]
gi\|595850056\|ref\|XP_007209845.1\|	2.2e-55	65.61	hypothetical protein PRUPE_ppa014689mg [Prunus persica]	[more]
gi\|645265122\|ref\|XP_008238002.1\|	3.7e-55	64.78	PREDICTED: uncharacterized protein LOC103336689 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006390.1	CmoCh04G006390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 10..168 score: 5.1
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 10..168 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006390	CmaCh16G005090	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006390	CmaCh04G005980	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006390	Cla005461	Watermelon (97103) v1	cmowmB686
CmoCh04G006390	Csa4G056550	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006390	MELO3C016214	Melon (DHL92) v3.5.1	cmomeB687
CmoCh04G006390	ClCG07G011150	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006390	CSPI04G06890	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006390	Lsi07G007720	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006390	Cp4.1LG14g02850	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006390	Cp4.1LG01g01130	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006390	MELO3C016214.2	Melon (DHL92) v3.6.1	cmomedB780
CmoCh04G006390	CsaV3_4G007100	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006390	Cla97C07G137880	Watermelon (97103) v2	cmowmbB756
CmoCh04G006390	Bhi01G002352	Wax gourd	cmowgoB0844
CmoCh04G006390	CsGy4G006830	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006390	Carg11423	Silver-seed gourd	carcmoB0902
CmoCh04G006390	Carg13148	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G006390	CmoCh16G005550	Cucurbita moschata (Rifu)	cmocmoB288

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006390	Melon (DHL92) v3.5.1	cmomeB697