Cp4.1LG14g02850 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTCGCCGCCCTGCTCTGTACTGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTCGCCGCCCTGCTCTGTACTGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTCGCCGCCCTGCTCTGTACTGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLKFHPSNGTYFSPPCSSRAK
BLAST of Cp4.1LG14g02850 vs. TrEMBL
Match: A0A0A0KX91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056550 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 3.6e-91 Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TrEMBL
Match: W9SWL3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021339 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 7.9e-70 Identity = 133/200 (66.50%), Postives = 160/200 (80.00%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TrEMBL
Match: M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014689mg PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64 Identity = 120/191 (62.83%), Postives = 153/191 (80.10%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TrEMBL
Match: V4T9C5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003495mg PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.7e-61 Identity = 118/200 (59.00%), Postives = 147/200 (73.50%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TrEMBL
Match: A0A067DL89_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029005mg PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.7e-61 Identity = 118/200 (59.00%), Postives = 147/200 (73.50%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TAIR10
Match: AT5G45320.1 (AT5G45320.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 218.4 bits (555), Expect = 4.0e-57 Identity = 106/198 (53.54%), Postives = 140/198 (70.71%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TAIR10
Match: AT1G13050.1 (AT1G13050.1 unknown protein) HSP 1 Score: 68.9 bits (167), Expect = 3.9e-12 Identity = 48/189 (25.40%), Postives = 84/189 (44.44%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. TAIR10
Match: AT5G56050.1 (AT5G56050.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10 Identity = 47/183 (25.68%), Postives = 80/183 (43.72%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. NCBI nr
Match: gi|449465669|ref|XP_004150550.1| (PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus]) HSP 1 Score: 342.4 bits (877), Expect = 5.2e-91 Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. NCBI nr
Match: gi|659101939|ref|XP_008451870.1| (PREDICTED: uncharacterized protein LOC103493029 [Cucumis melo]) HSP 1 Score: 334.0 bits (855), Expect = 1.9e-88 Identity = 164/200 (82.00%), Postives = 178/200 (89.00%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. NCBI nr
Match: gi|703156685|ref|XP_010111514.1| (hypothetical protein L484_021339 [Morus notabilis]) HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69 Identity = 133/200 (66.50%), Postives = 160/200 (80.00%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. NCBI nr
Match: gi|1009158815|ref|XP_015897483.1| (PREDICTED: uncharacterized protein LOC107431113 [Ziziphus jujuba]) HSP 1 Score: 269.6 bits (688), Expect = 4.3e-69 Identity = 124/192 (64.58%), Postives = 158/192 (82.29%), Query Frame = 1
BLAST of Cp4.1LG14g02850 vs. NCBI nr
Match: gi|658006477|ref|XP_008338403.1| (PREDICTED: uncharacterized protein LOC103401475 [Malus domestica]) HSP 1 Score: 255.4 bits (651), Expect = 8.4e-65 Identity = 124/201 (61.69%), Postives = 157/201 (78.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|