Carg11423 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11423
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_025 : 963023 .. 963625 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTTGCCGCCCTGCTCTGTACCGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA

mRNA sequence

ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTTGCCGCCCTGCTCTGTACCGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA

Coding sequence (CDS)

ATGCCACCGAAACTGATCTCCGACGCAAAGCGCCGCACTCATCCTCTCGTTTGGCTTGCCGCCCTGCTCTGTACCGTAGTTTCGATCGCCGTCATAATCGGAGGCATCGTCATCTTCATCGGTTACCTAGTGATCCACCCTAGGGTTCCGATGATCGGCGTTATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGGCGTCTGGAAGTTCAATTGACGGTGGTGGTGAAGGCGGAGAACGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTCTTCCTCCATTTCCTAGGGATTAAGATCGCGCAGCTCGTGGCGAGGGATTTCGATGTGAGGAAGAACAGTTCTCTGATGCTGCCTTACGTAGTGCCTTCGAATTCGATTCCTCTGACGCCGGAGCAGATGGAGGAAGTGGATTACGCGTTGAAGTCGGATGTGAGCCGGTTCGATTTGATCGGGGATACGAGAGTTCAATGGCGCGTTGGATTGCTTGGATCTGTTAAGTACAGGTGCCATCTTCATTGCGTGCTTAAATTTCATCCTTCTAATGGAACTTACTTCAGTCCGCCTTGCAGCTCCAGAGCTAAATAA

Protein sequence

MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLKFHPSNGTYFSPPCSSRAK

Homology

[Close]

BLAST of Carg11423 vs. NCBI nr
Match: XP_022931289.1 (uncharacterized protein LOC111437517 [Cucurbita moschata] >XP_023552821.1 uncharacterized protein LOC111810341 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 1.1e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV
Sbjct: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTYFSPPCSSRAK
Sbjct: 181 LKFHPSNGTYFSPPCSSRAK 200

[Close]

BLAST of Carg11423 vs. NCBI nr
Match: XP_022985334.1 (uncharacterized protein LOC111483375 [Cucurbita maxima])

HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105
Identity = 195/200 (97.50%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIG+IDAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGIIDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKN S
Sbjct: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNGS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           LML Y V SNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV
Sbjct: 121 LMLHYEVASNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTYFSPPCSSRAK
Sbjct: 181 LKFHPSNGTYFSPPCSSRAK 200

[Close]

BLAST of Carg11423 vs. NCBI nr
Match: XP_004150550.1 (PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hypothetical protein Csa_4G056550 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 1.0e-90
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQ DIAGRLEVQLT++++A+NDNAKAHASFSD+SFFLHFLGIKIAQLVA  F+VRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           +  PY V SNSIPL PEQME VD  LK+D+SRFDLIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTY S PCSSR K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of Carg11423 vs. NCBI nr
Match: XP_008451870.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 3.6e-88
Identity = 164/200 (82.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQ DIAGRLEVQLT+VV+A+NDNAKAHASFSD+SFFLHFL IKIAQLVA  F+V+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           +   Y V SNSIPL PEQME VDY LK+D+S F LIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTY   PCSSR K
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

[Close]

BLAST of Carg11423 vs. NCBI nr
Match: XP_022136394.1 (uncharacterized protein LOC111008115 [Momordica charantia])

HSP 1 Score: 326.2 bits (835), Expect = 7.5e-86
Identity = 159/200 (79.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPP+LISDAKRRTHPLVW AA+LCT++SIAVIIGGIV+F+GYLVIHPR+P I VI AHLD
Sbjct: 1   MPPRLISDAKRRTHPLVWFAAVLCTILSIAVIIGGIVVFVGYLVIHPRIPTISVIGAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
            FQ D+AGRLEVQLT+VV+AENDNAKAHASFSDTSFFL FLGI+IA+LVA  F VRKNSS
Sbjct: 61  GFQIDVAGRLEVQLTIVVEAENDNAKAHASFSDTSFFLSFLGIRIARLVADPFAVRKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
               Y + S+SIPL PEQMEE DYALKSD+SRFDL G+TRVQWRVG+LGSVKY CHLHC 
Sbjct: 121 HKFQYAIASSSIPLNPEQMEEADYALKSDLSRFDLKGNTRVQWRVGMLGSVKYWCHLHCE 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTY S PCSS+AK
Sbjct: 181 LKFHPSNGTYLSLPCSSKAK 200

[Close]

BLAST of Carg11423 vs. TAIR10
Match: AT5G45320.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 218.4 bits (555), Expect = 4.0e-57
Identity = 106/198 (53.54%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 3   PKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNF 62
           P+L S  +  T P +W AA++C ++SI VI+GGI++F+GYLVIHPRVP+I V DAHLD  
Sbjct: 2   PRLTS--RHGTSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFL 61

Query: 63  QNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLM 122
           + DI G L+ QLT+V++ ENDNAKAHA F +T F L + G  IA L A +F+V K  S+ 
Sbjct: 62  KYDIVGVLQTQLTIVIRVENDNAKAHALFDETEFKLSYEGKPIAILKAPEFEVVKEKSMF 121

Query: 123 LPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLK 182
           LPY+V S  IPL P  M+ VDYA+K DV  F+L G +R +WRVG LGSVK+ C+L C L+
Sbjct: 122 LPYLVQSYPIPLNPTMMQAVDYAVKKDVITFELKGGSRTRWRVGPLGSVKFECNLSCQLR 181

Query: 183 FHPSNGTYFSPPCSSRAK 201
           F PS+ +Y   PC+S  K
Sbjct: 182 FRPSDHSYIPSPCTSAHK 197

[Close]

BLAST of Carg11423 vs. TAIR10
Match: AT3G26350.1 (LOCATED IN: chloroplast)

HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16
Identity = 50/189 (26.46%), Postives = 89/189 (47.09%), Query Frame = 0


Query: 11  RRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNFQNDIAGRL 70
           R T+ + W AA  C +  + +I+GG++I I YLV  PR P + +  A+L+    D+   L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 71  EVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLMLPYVVPSN 130
              LT++    N + K+   FS  +F L++    IA      F V K +S+     + S+
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 131 SIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLKFH-PSNGT 190
            + L   Q  E+   +++     +L G    +  +G L    Y+ H HC +  + P  G 
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLGA 346

Query: 191 YFSPPCSSR 199
             +  C+++
Sbjct: 347 MRARRCNTK 355

[Close]

BLAST of Carg11423 vs. TAIR10
Match: AT1G13050.1 (unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 46/189 (24.34%), Postives = 78/189 (41.27%), Query Frame = 0


Query: 11  RRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNFQNDIAGRL 70
           +RT P+   A + C          G+++ + YL   PR P   +  A L+    D+   L
Sbjct: 128 KRTKPMTLPATICCXXXXXXXXXSGLILLLVYLANRPRSPYFDISAATLNTANLDMGYVL 187

Query: 71  EVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLMLPYVVPSN 130
              L VVV   N + K+   FS   F L+F    IA      F V K  S+   + + S+
Sbjct: 188 NGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFHLVSS 247

Query: 131 SIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLKFH-PSNGT 190
            + +   Q +++   L +     +L G    +  +G L    Y  H  C +  + P  GT
Sbjct: 248 QVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTPPAGT 307

Query: 191 YFSPPCSSR 199
             +  C+++
Sbjct: 308 MRARRCNTK 316

[Close]

BLAST of Carg11423 vs. TrEMBL
Match: tr|A0A0A0KX91|A0A0A0KX91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.7e-91
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKR THPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRHTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQ DIAGRLEVQLT++++A+NDNAKAHASFSD+SFFLHFLGIKIAQLVA  F+VRKNSS
Sbjct: 61  NFQIDIAGRLEVQLTIIIEAKNDNAKAHASFSDSSFFLHFLGIKIAQLVADPFEVRKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           +  PY V SNSIPL PEQME VD  LK+D+SRFDLIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 MKFPYAVVSNSIPLNPEQMESVDSDLKADLSRFDLIGNTRVQWRVGLLGSVKYECHLHCG 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTY S PCSSR K
Sbjct: 181 LKFHPSNGTYLSSPCSSRVK 200

[Close]

BLAST of Carg11423 vs. TrEMBL
Match: tr|A0A1S3BSH0|A0A1S3BSH0_CUCME (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 2.4e-88
Identity = 164/200 (82.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIV+FIGYLVIHPR+P I ++DAHLD
Sbjct: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVVFIGYLVIHPRIPTISILDAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
           NFQ DIAGRLEVQLT+VV+A+NDNAKAHASFSD+SFFLHFL IKIAQLVA  F+V+KNSS
Sbjct: 61  NFQIDIAGRLEVQLTIVVEAKNDNAKAHASFSDSSFFLHFLEIKIAQLVADPFEVKKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           +   Y V SNSIPL PEQME VDY LK+D+S F LIG+TRVQWRVGLLGSVKY CHLHC 
Sbjct: 121 MKFHYAVASNSIPLNPEQMETVDYDLKADLSPFTLIGNTRVQWRVGLLGSVKYECHLHCE 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHPSNGTY   PCSSR K
Sbjct: 181 LKFHPSNGTYLRSPCSSRVK 200

[Close]

BLAST of Carg11423 vs. TrEMBL
Match: tr|W9SWL3|W9SWL3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.5e-69
Identity = 133/200 (66.50%), Postives = 160/200 (80.00%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MP KLI   ++ THP++W  A++CTVV+IAVII G+V+F+GYLVIHP VP+I V+ AHLD
Sbjct: 1   MPGKLIQGPEKATHPVIWCLAIVCTVVAIAVIITGLVVFVGYLVIHPSVPIISVVSAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
             QNDIAG LE +LTVVVKAEN+NAKAHASFSDTSFFL F GI IA+LVA  F+V KN S
Sbjct: 61  KLQNDIAGLLEAELTVVVKAENENAKAHASFSDTSFFLSFQGIVIAKLVAEPFEVAKNDS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           L LPY V S+SIPL PE+M++VD ALK D   FDL G +R +WRVGLLGSVK+ C+L+C 
Sbjct: 121 LQLPYKVLSSSIPLNPEEMQQVDMALKDDRITFDLKGHSRARWRVGLLGSVKFWCNLNCQ 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           LKFHP  G+Y S PC+SRAK
Sbjct: 181 LKFHPLTGSYMSSPCTSRAK 200

[Close]

BLAST of Carg11423 vs. TrEMBL
Match: tr|M5WBE7|M5WBE7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.1e-64
Identity = 120/191 (62.83%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 10  KRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLDNFQNDIAGR 69
           +R THPLVW AA++CTV++IAVII GI +F GY++IHPRVP I V  AHLDNFQN +AG 
Sbjct: 11  QRTTHPLVWFAAVICTVIAIAVIIAGIALFAGYMIIHPRVPFITVTSAHLDNFQNSVAGL 70

Query: 70  LEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSSLMLPYVVPS 129
           L+ ++T++VKAENDN KAHASFSDTSF L F G+ IA+LVA  FDV+KNSS+   Y+V S
Sbjct: 71  LDTEITIIVKAENDNTKAHASFSDTSFTLSFQGLNIARLVALPFDVKKNSSVDFHYLVQS 130

Query: 130 NSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCVLKFHPSNGT 189
           +SIPL+PEQM+++D +LK D   F+L G+ R +WRVG +GSVK+  HL+C L+FHPSNG+
Sbjct: 131 SSIPLSPEQMDQIDISLKRDKISFNLKGNLRARWRVGPIGSVKFWGHLNCHLRFHPSNGS 190

Query: 190 YFSPPCSSRAK 201
           Y   PCSSRAK
Sbjct: 191 YIHSPCSSRAK 201

[Close]

BLAST of Carg11423 vs. TrEMBL
Match: tr|A0A2P6PBD4|A0A2P6PBD4_ROSCH (Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0215061 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.7e-62
Identity = 123/200 (61.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 1   MPPKLISDAKRRTHPLVWLAALLCTVVSIAVIIGGIVIFIGYLVIHPRVPMIGVIDAHLD 60
           MP KLI   +R THPLVWLAA++CT++SIAVII GIV+F+GY+VIHPRVP I V  AHLD
Sbjct: 1   MPRKLIHGPQRGTHPLVWLAAIICTIISIAVIIAGIVVFVGYMVIHPRVPFIKVTTAHLD 60

Query: 61  NFQNDIAGRLEVQLTVVVKAENDNAKAHASFSDTSFFLHFLGIKIAQLVARDFDVRKNSS 120
            F++D    L+  +T+VV+AENDN KAHASFSDTSF L F G+ IA+LVA  F+VRKNSS
Sbjct: 61  KFESDATSLLDTAITIVVRAENDNTKAHASFSDTSFTLSFQGMNIAKLVAYPFEVRKNSS 120

Query: 121 LMLPYVVPSNSIPLTPEQMEEVDYALKSDVSRFDLIGDTRVQWRVGLLGSVKYRCHLHCV 180
           +   YVV S+SIPL+ EQ+++VD +LK D   FDL G+ R +WRV LLGS+K+  HL+C 
Sbjct: 121 VDFNYVVESSSIPLSSEQVDQVDNSLKRDRISFDLKGNVRARWRVWLLGSIKFWGHLNCR 180

Query: 181 LKFHPSNGTYFSPPCSSRAK 201
           L FH  NG+Y   PCSSRAK
Sbjct: 181 LNFHAFNGSYIYSPCSSRAK 200

The following BLAST results are available for this feature:

BLAST of Carg11423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931289.1	1.1e-108	100.00	uncharacterized protein LOC111437517 [Cucurbita moschata] >XP_023552821.1 unchar...	[more]
XP_022985334.1	1.9e-105	97.50	uncharacterized protein LOC111483375 [Cucurbita maxima]	[more]
XP_004150550.1	1.0e-90	83.00	PREDICTED: uncharacterized protein LOC101214190 [Cucumis sativus] >KGN53464.1 hy...	[more]
XP_008451870.1	3.6e-88	82.00	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]	[more]
XP_022136394.1	7.5e-86	79.50	uncharacterized protein LOC111008115 [Momordica charantia]	[more]

BLAST of Carg11423 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45320.1	4.0e-57	53.54	FUNCTIONS IN: molecular_function unknown	[more]
AT3G26350.1	4.5e-16	26.46	LOCATED IN: chloroplast	[more]
AT1G13050.1	1.4e-09	24.34	unknown protein	[more]

BLAST of Carg11423 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11423 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KX91\|A0A0A0KX91_CUCSA	6.7e-91	83.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056550 PE=4 SV=1	[more]
tr\|A0A1S3BSH0\|A0A1S3BSH0_CUCME	2.4e-88	82.00	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103493029 PE=4 SV=1	[more]
tr\|W9SWL3\|W9SWL3_9ROSA	1.5e-69	66.50	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021339 PE=4 SV=1	[more]
tr\|M5WBE7\|M5WBE7_PRUPE	3.1e-64	62.83	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G014700 PE=4 SV=1	[more]
tr\|A0A2P6PBD4\|A0A2P6PBD4_ROSCH	1.7e-62	61.50	Putative Late embryogenesis abundant protein, LEA-14 OS=Rosa chinensis OX=74649 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11423-RA	Carg11423-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852:SF9	SUBFAMILY NOT NAMED	coord: 8..198
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 8..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11423	Cla005461	Watermelon (97103) v1	carwmB0652
Carg11423	Csa4G056550	Cucumber (Chinese Long) v2	carcuB0677
Carg11423	MELO3C016214	Melon (DHL92) v3.5.1	carmeB0653
Carg11423	ClCG07G011150	Watermelon (Charleston Gray)	carwcgB0637
Carg11423	CSPI04G06890	Wild cucumber (PI 183967)	carcpiB0687
Carg11423	CmaCh16G005090	Cucurbita maxima (Rimu)	carcmaB0924
Carg11423	CmaCh04G005980	Cucurbita maxima (Rimu)	carcmaB0927
Carg11423	CmoCh16G005550	Cucurbita moschata (Rifu)	carcmoB0898
Carg11423	CmoCh04G006390	Cucurbita moschata (Rifu)	carcmoB0902
Carg11423	Lsi07G007730	Bottle gourd (USVL1VR-Ls)	carlsiB596
Carg11423	Cp4.1LG01g01130	Cucurbita pepo (Zucchini)	carcpeB0929
Carg11423	Cp4.1LG14g02850	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11423	CsGy4G006830	Cucumber (Gy14) v2	carcgybB0652
Carg11423	MELO3C016214.2	Melon (DHL92) v3.6.1	carmedB0662
Carg11423	CsaV3_4G007100	Cucumber (Chinese Long) v3	carcucB0689
Carg11423	Cla97C07G137880	Watermelon (97103) v2	carwmbB0682
Carg11423	Bhi01G002353	Wax gourd	carwgoB0770

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11423	Carg13148	Silver-seed gourd	carcarB050

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11423	Silver-seed gourd	carcarB052
Carg11423	Cucumber (Gy14) v1	carcgyB0733
Carg11423	Melon (DHL92) v3.5.1	carmeB0652
Carg11423	Melon (DHL92) v3.6.1	carmedB0663
Carg11423	Melon (DHL92) v3.6.1	carmedB0664