CsGy3G020180 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G020180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontranscription factor TCP1
LocationChr3 : 16790453 .. 16791713 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATCCCGAGCGCTCCTGGATCAGGGACAACGGGGATGGGGAAGAAGGATCGGCATAGCAAGATTTATACAGCTCAGGGTTTGCGCGATCGAAGAGTGAGATTGTCCATTGATATAGCTCGCAAGTTCTTTGATTTGCAAGACATGTTAGGGTACGATAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAGAGTGGAAATATTGGGGTTCATGGAGGGGCTAAAAAATTTTCTTTGGTAGCTGATTCTTCTGATGTTGAAGAAGAATATGATGATGATAAAGAAGGATGGGAGCTGAAGATGAAATCAATGTTGAGCATTGATGAACAAGAGAAAGTGAGTAAAGAAAAAGTTGAAGGTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAAGCCAGAGCAAGAGCCAGAGAGAGAACCATGGAGAAGAAGCAAGTTGACAACAGGAAAGTTTACGGTCATCAGAAGGGCGGCGCCCAAGAAGTTTCGAATCATTGGAGTAAGCATTTGAATCATAGCACTGAAACTTCAAATCTGTCAATGGAGGAATCCTCGTTCATTAACAAGAGAAAGATCATTTATTCTAAGAAGTTCATCAACCACGACAACTACAGTGATAAATCGCGTCGAGATGACGAGAATGCCGAAACCTCTCAACGGAAGCTTTTGGATCAGATGAAGGCTTCAAAGAGGAAATGGAAACCTTCCATTATTTCTGGTTCTTCTCAAAGAAATCTTCTCATCTCCATTGACGGTATTCCCATTAACTTAACTCAAAATTTGGATACCAATAGCAACCCCAATTATCCTATTGCCAAGTAAAATTTTATTAACAGGTAATTTCAACCATCAAAGGCTTTAGATTTTTTATTTTTTCCCCCTAAAAAATTGATGAATATTTTGTTTTTGTGTTTCGGTTTCTTTTTTTTCTTCTTTTTTTTTCTTTTTTGGCAGTTTTACAAATCAAGGGTGGAATGCAGTCAACAATGTCAAAACGTGGCCTGTTTTAGATTGGTTTTTCTTCAACTACTACTTGAATGTTCTTTTAGATTTATGATATTATAACAATTAAAGACTGATAATTAAGTTTTTTCTTGCTTTATTATAATCACTAAATCATGTTCGATCGATTATATTATTTTTCTTTAGTATATCCAAATATATATTGTGTCTTTGTCTCATGGATATTCTTCAAATAATATTAATTTATAGTTTTGGC

mRNA sequence

ATGGTTATCCCGAGCGCTCCTGGATCAGGGACAACGGGGATGGGGAAGAAGGATCGGCATAGCAAGATTTATACAGCTCAGGGTTTGCGCGATCGAAGAGTGAGATTGTCCATTGATATAGCTCGCAAGTTCTTTGATTTGCAAGACATGTTAGGGTACGATAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAGAGTGGAAATATTGGGGTTCATGGAGGGGCTAAAAAATTTTCTTTGGTAGCTGATTCTTCTGATGTTGAAGAAGAATATGATGATGATAAAGAAGGATGGGAGCTGAAGATGAAATCAATGTTGAGCATTGATGAACAAGAGAAAGTGAGTAAAGAAAAAGTTGAAGGTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAAGCCAGAGCAAGAGCCAGAGAGAGAACCATGGAGAAGAAGCAAGTTGACAACAGGAAAGTTTACGGTCATCAGAAGGGCGGCGCCCAAGAAGTTTCGAATCATTGGAGTAAGCATTTGAATCATAGCACTGAAACTTCAAATCTGTCAATGGAGGAATCCTCGTTCATTAACAAGAGAAAGATCATTTATTCTAAGAAGTTCATCAACCACGACAACTACAGTGATAAATCGCGTCGAGATGACGAGAATGCCGAAACCTCTCAACGGAAGCTTTTGGATCAGATGAAGGCTTCAAAGAGGAAATGGAAACCTTCCATTATTTCTGGTTCTTCTCAAAGAAATCTTCTCATCTCCATTGACGTTTTACAAATCAAGGGTGGAATGCAGTCAACAATGTCAAAACGTGGCCTGTTTTAGATTGGTTTTTCTTCAACTACTACTTGAATGTTCTTTTAGATTTATGATATTATAACAATTAAAGACTGATAATTAAGTTTTTTCTTGCTTTATTATAATCACTAAATCATGTTCGATCGATTATATTATTTTTCTTTAGTATATCCAAATATATATTGTGTCTTTGTCTCATGGATATTCTTCAAATAATATTAATTTATAGTTTTGGC

Coding sequence (CDS)

ATGGTTATCCCGAGCGCTCCTGGATCAGGGACAACGGGGATGGGGAAGAAGGATCGGCATAGCAAGATTTATACAGCTCAGGGTTTGCGCGATCGAAGAGTGAGATTGTCCATTGATATAGCTCGCAAGTTCTTTGATTTGCAAGACATGTTAGGGTACGATAAAGCAAGCAAAACCCTAGAGTGGCTTTTTAGCAAATCCAAAAAAGCAATTAAAGAGCTTTCAAGGACCAAGAGTGGAAATATTGGGGTTCATGGAGGGGCTAAAAAATTTTCTTTGGTAGCTGATTCTTCTGATGTTGAAGAAGAATATGATGATGATAAAGAAGGATGGGAGCTGAAGATGAAATCAATGTTGAGCATTGATGAACAAGAGAAAGTGAGTAAAGAAAAAGTTGAAGGTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAAGCCAGAGCAAGAGCCAGAGAGAGAACCATGGAGAAGAAGCAAGTTGACAACAGGAAAGTTTACGGTCATCAGAAGGGCGGCGCCCAAGAAGTTTCGAATCATTGGAGTAAGCATTTGAATCATAGCACTGAAACTTCAAATCTGTCAATGGAGGAATCCTCGTTCATTAACAAGAGAAAGATCATTTATTCTAAGAAGTTCATCAACCACGACAACTACAGTGATAAATCGCGTCGAGATGACGAGAATGCCGAAACCTCTCAACGGAAGCTTTTGGATCAGATGAAGGCTTCAAAGAGGAAATGGAAACCTTCCATTATTTCTGGTTCTTCTCAAAGAAATCTTCTCATCTCCATTGACGTTTTACAAATCAAGGGTGGAATGCAGTCAACAATGTCAAAACGTGGCCTGTTTTAG

Protein sequence

MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSIDEQEKVSKEKVEGFNLLAKESRAKARARARERTMEKKQVDNRKVYGHQKGGAQEVSNHWSKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKASKRKWKPSIISGSSQRNLLISIDVLQIKGGMQSTMSKRGLF
Homology
[Close]
BLAST of CsGy3G020180 vs. NCBI nr
Match: KGN57731.1 (hypothetical protein Csa_3G265270 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 5.8e-132
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0 

Query: 1   MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60
           MVIPSAPG+GTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL
Sbjct: 1   MVIPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60

Query: 61  EWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120
           EWLFSKSKKAIKELSRTKSGN+GVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS
Sbjct: 61  EWLFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120

Query: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180
           IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW
Sbjct: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180

Query: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 240
           SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM
Sbjct: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 240

Query: 241 KASKRKWKPSIISGSSQRNLLISIDVLQI 270
           KASKRKWKPSIISGSSQRN LISID + I
Sbjct: 241 KASKRKWKPSIISGSSQRNFLISIDGIPI 269

[Close]
BLAST of CsGy3G020180 vs. NCBI nr
Match: XP_011651364.1 (PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 5.8e-132
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0 

Query: 1   MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60
           MVIPSAPG+GTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL
Sbjct: 96  MVIPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 155

Query: 61  EWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120
           EWLFSKSKKAIKELSRTKSGN+GVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS
Sbjct: 156 EWLFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 215

Query: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180
           IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW
Sbjct: 216 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 275

Query: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 240
           SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM
Sbjct: 276 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 335

Query: 241 KASKRKWKPSIISGSSQRNLLISIDVLQI 270
           KASKRKWKPSIISGSSQRN LISID + I
Sbjct: 336 KASKRKWKPSIISGSSQRNFLISIDGIPI 364

[Close]
BLAST of CsGy3G020180 vs. NCBI nr
Match: XP_008461599.2 (PREDICTED: transcription factor TCP1 [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 6.0e-113
Identity = 240/270 (88.89%), Postives = 251/270 (92.96%), Query Frame = 0 

Query: 1   MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60
           MV+PSAPG+GTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL
Sbjct: 96  MVVPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 155

Query: 61  EWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120
           EWLFSKS+KAIKELSRTK  N+G HGGAKK SL A SSDVEEEYDDDK GWELKMKSML 
Sbjct: 156 EWLFSKSRKAIKELSRTK--NVGFHGGAKKLSLAAASSDVEEEYDDDK-GWELKMKSMLR 215

Query: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180
           IDEQEKVSKEKVE FNL+AKESR XXXXXXXXXXXEKKQVD+ KVYGHQKGGAQEVS+HW
Sbjct: 216 IDEQEKVSKEKVEIFNLVAKESRXXXXXXXXXXXXEKKQVDDSKVYGHQKGGAQEVSDHW 275

Query: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSD-KSRRDDENAETSQRKLLDQ 240
           SKHLNHSTETSNLSMEESSF+NKRK IY+KKFINHDNY+  KS RDDENAETS  KLLDQ
Sbjct: 276 SKHLNHSTETSNLSMEESSFMNKRK-IYAKKFINHDNYTTVKSCRDDENAETSHWKLLDQ 335

Query: 241 MKASKRKWKPSIISGSSQRNLLISIDVLQI 270
           MKASKRKWKPSIISGSSQRNLLISID + I
Sbjct: 336 MKASKRKWKPSIISGSSQRNLLISIDDIPI 361

[Close]
BLAST of CsGy3G020180 vs. NCBI nr
Match: XP_023521549.1 (transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo] >XP_023524593.1 transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 8.5e-59
Identity = 165/277 (59.57%), Postives = 179/277 (64.62%), Query Frame = 0 

Query: 3   IPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 62
           IPSAPG+   GMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW
Sbjct: 88  IPSAPGA-RMGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEW 147

Query: 63  LFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSID 122
           LFSKSKKAIKELSRTK GN  V GGA++ SL   +SDVEEE +                 
Sbjct: 148 LFSKSKKAIKELSRTKYGNFEVVGGARRMSL---ASDVEEEEE----------------- 207

Query: 123 EQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHWSK 182
                   KVE FNLLAK+SRA             K  D ++V                K
Sbjct: 208 -----MTNKVEVFNLLAKQSRA-------------KAKDKKRV------XXXXXXXXXGK 267

Query: 183 HLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKA 242
              H  ETSNLSMEESSF+NKRK +Y+KKFI  D    KS RD++ AE SQ KLLDQMKA
Sbjct: 268 IDIHGGETSNLSMEESSFMNKRK-LYAKKFIEDDEM--KSCRDND-AEASQWKLLDQMKA 315

Query: 243 S----------KRKWKPSIISGSSQRNLLISIDVLQI 270
           S          KRKWKPSIISGSSQRNLLISID + I
Sbjct: 328 SKGYFQEPSMIKRKWKPSIISGSSQRNLLISIDGIPI 315

[Close]
BLAST of CsGy3G020180 vs. NCBI nr
Match: XP_022143422.1 (transcription factor TEOSINTE BRANCHED 1-like [Momordica charantia])

HSP 1 Score: 235.0 bits (598), Expect = 3.2e-58
Identity = 159/274 (58.03%), Postives = 182/274 (66.42%), Query Frame = 0 

Query: 9   SGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSK 68
           SG TG GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKS+
Sbjct: 96  SGPTG-GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSR 155

Query: 69  KAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLSIDEQEKVS 128
           KAIK+LSRTK   +  +GGAK+ SL    SDVE                        KVS
Sbjct: 156 KAIKDLSRTKHFGVNSYGGAKRMSL---DSDVE---XXXXXXXXXXXXXXXXXXXXXKVS 215

Query: 129 KEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDN---RKVYGHQKGGAQEVSNHWSKHLN 188
           K KVE F+LL+KESRA           +K+ V+N    K++GH+K   +EVSN W+KHL+
Sbjct: 216 K-KVEVFHLLSKESRA---KARERTMDKKQVVENNGVEKIFGHRKSSGEEVSNCWNKHLD 275

Query: 189 HSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQMKAS-- 248
            STETS L M+ES F+NKRKI  +KKFI+ DN          + E SQ KLLDQ+K S  
Sbjct: 276 QSTETSTLPMQESVFMNKRKIC-AKKFIDDDN-------TKPDTEISQWKLLDQVKPSIG 335

Query: 249 --------KRKWKPSIISGSSQRNLLISIDVLQI 270
                   KRKW+PSIISGSSQ NLLISID L I
Sbjct: 336 LLQEPSITKRKWRPSIISGSSQTNLLISIDGLPI 350

[Close]
BLAST of CsGy3G020180 vs. TAIR10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KS+KAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 76  RTKS--------GNIG 84
           + K+        GNIG
Sbjct: 147 QAKNLNNDDEDFGNIG 162

[Close]
BLAST of CsGy3G020180 vs. TAIR10
Match: AT1G68800.1 (TCP domain protein 12)

HSP 1 Score: 101.7 bits (252), Expect = 7.7e-22
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLFSKSK +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 76  RTKSGNIGVHGGAKKFSLVAD 97
              + +    GG K   L  D
Sbjct: 172 ERVAAS---EGGGKDEHLQVD 189

[Close]
BLAST of CsGy3G020180 vs. TAIR10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-16
Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           + DRHSKI TA+G RDRR+RLS+D+A++ F LQDMLG+DKASKT+EWL +++K  I +++
Sbjct: 148 RTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIA 207

Query: 76  RTKS 80
            T S
Sbjct: 208 TTLS 211

[Close]
BLAST of CsGy3G020180 vs. TAIR10
Match: AT2G31070.1 (TCP domain protein 10)

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-15
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 15 GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKEL 74
          G+KDRHSK++T++G RDRRVRLS   A +F+D+QD LGYD+ SK ++WL  K+K AI +L
Sbjct: 28 GRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL 87

[Close]
BLAST of CsGy3G020180 vs. TAIR10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 0 

Query: 15  GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKEL 74
           G+KDRHSK+ TA+G RDRRVRLS   A +F+D+QD LG+D+ SK ++WL +K+K AI +L
Sbjct: 48  GRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDL 107

Query: 75  SRTKSGN 82
           ++    N
Sbjct: 108 AQLPPWN 114

[Close]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match: sp|Q9FYG7|TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KS+KAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 76  RTKS--------GNIG 84
           + K+        GNIG
Sbjct: 147 QAKNLNNDDEDFGNIG 162

[Close]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match: sp|A0AQW4|TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLFSKSK +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 76  RTKSGNIGVHGGAKKFSLVAD 97
              + +    GG K   L  D
Sbjct: 172 ERVAAS---EGGGKDEHLQVD 189

[Close]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match: sp|O49250|CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.9e-20
Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK AIKEL 
Sbjct: 87  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 146

Query: 76  RTKSGNIGVHGGAKKFSLVADSSDV----EEEYDDDKEGWELKM--KSMLSIDEQEKVSK 131
           ++KS        +   S   D  +V     E   D  +G  LK   K   ++D  +  +K
Sbjct: 147 QSKSTK------SNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAK 201

[Close]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match: sp|Q9SBV9|CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.9e-20
Identity = 61/117 (52.14%), Postives = 74/117 (63.25%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK A+KEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELV 138

Query: 76  RTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKM--KSMLSIDEQEKVSKE 131
           ++KS              V   S   E   D  +G  LK   K   ++D  +  +KE
Sbjct: 139 QSKSTKSNSSSPCDDCEEVV--SVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKE 193

[Close]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match: sp|Q9SBV6|CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.9e-20
Identity = 63/121 (52.07%), Postives = 77/121 (63.64%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL +KSK AIKEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 138

Query: 76  RTKSGNIGVHGGAKKFSLVADSSDV----EEEYDDDKEGWELKM--KSMLSIDEQEKVSK 131
           ++KS        +   S   D  +V     E   D  +G  LK   K   ++D  +  +K
Sbjct: 139 QSKSTK------SNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAK 193

[Close]
BLAST of CsGy3G020180 vs. TrEMBL
Match: tr|A0A0A0LCE8|A0A0A0LCE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265270 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 3.8e-132
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0 

Query: 1   MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60
           MVIPSAPG+GTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL
Sbjct: 1   MVIPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60

Query: 61  EWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120
           EWLFSKSKKAIKELSRTKSGN+GVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS
Sbjct: 61  EWLFSKSKKAIKELSRTKSGNLGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120

Query: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180
           IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW
Sbjct: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180

Query: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 240
           SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM
Sbjct: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSDKSRRDDENAETSQRKLLDQM 240

Query: 241 KASKRKWKPSIISGSSQRNLLISIDVLQI 270
           KASKRKWKPSIISGSSQRN LISID + I
Sbjct: 241 KASKRKWKPSIISGSSQRNFLISIDGIPI 269

[Close]
BLAST of CsGy3G020180 vs. TrEMBL
Match: tr|A0A1S3CGD1|A0A1S3CGD1_CUCME (transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 4.0e-113
Identity = 240/270 (88.89%), Postives = 251/270 (92.96%), Query Frame = 0 

Query: 1   MVIPSAPGSGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 60
           MV+PSAPG+GTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL
Sbjct: 96  MVVPSAPGAGTTGMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTL 155

Query: 61  EWLFSKSKKAIKELSRTKSGNIGVHGGAKKFSLVADSSDVEEEYDDDKEGWELKMKSMLS 120
           EWLFSKS+KAIKELSRTK  N+G HGGAKK SL A SSDVEEEYDDDK GWELKMKSML 
Sbjct: 156 EWLFSKSRKAIKELSRTK--NVGFHGGAKKLSLAAASSDVEEEYDDDK-GWELKMKSMLR 215

Query: 121 IDEQEKVSKEKVEGFNLLAKESRAXXXXXXXXXXXEKKQVDNRKVYGHQKGGAQEVSNHW 180
           IDEQEKVSKEKVE FNL+AKESR XXXXXXXXXXXEKKQVD+ KVYGHQKGGAQEVS+HW
Sbjct: 216 IDEQEKVSKEKVEIFNLVAKESRXXXXXXXXXXXXEKKQVDDSKVYGHQKGGAQEVSDHW 275

Query: 181 SKHLNHSTETSNLSMEESSFINKRKIIYSKKFINHDNYSD-KSRRDDENAETSQRKLLDQ 240
           SKHLNHSTETSNLSMEESSF+NKRK IY+KKFINHDNY+  KS RDDENAETS  KLLDQ
Sbjct: 276 SKHLNHSTETSNLSMEESSFMNKRK-IYAKKFINHDNYTTVKSCRDDENAETSHWKLLDQ 335

Query: 241 MKASKRKWKPSIISGSSQRNLLISIDVLQI 270
           MKASKRKWKPSIISGSSQRNLLISID + I
Sbjct: 336 MKASKRKWKPSIISGSSQRNLLISIDDIPI 361

[Close]
BLAST of CsGy3G020180 vs. TrEMBL
Match: tr|A0A1J7HXK1|A0A1J7HXK1_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26698 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.7e-26
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QGLRDRRVRLSI I+RKFFDLQDMLG+DKAS TLEWLF+KSKKAIKEL+
Sbjct: 111 KKDRHSKIYTSQGLRDRRVRLSIGISRKFFDLQDMLGFDKASNTLEWLFNKSKKAIKELA 170

Query: 76  RTKSGNIGVHGGAKKFSLVADSSDVEE 103
           R+K+ NI + G AK FS  +D  D  E
Sbjct: 171 RSKNSNI-IEGDAKSFSYSSDCEDCNE 196

[Close]
BLAST of CsGy3G020180 vs. TrEMBL
Match: tr|K7LXS7|K7LXS7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100801549 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QGLRDRRVRLSI+IARKFFDLQDMLG+DKAS TLEWLF+KSK+AIKEL+
Sbjct: 104 KKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELA 163

Query: 76  RTKSGNIGVHGGAKKFSLVADSSD 100
           R+K  N     GAK FS  +D  D
Sbjct: 164 RSKHSNNNSDEGAKSFSSSSDCED 187

[Close]
BLAST of CsGy3G020180 vs. TrEMBL
Match: tr|Q6VM70|Q6VM70_LUPTE (CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus texensis OX=28959 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.8e-25
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 0 

Query: 16  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELS 75
           KKDRHSKIYT+QGLRDRRVRLSI I+RK FDLQDMLG+DKAS TLEWLF+KSKKAIKEL+
Sbjct: 107 KKDRHSKIYTSQGLRDRRVRLSIGISRKLFDLQDMLGFDKASNTLEWLFNKSKKAIKELA 166

Query: 76  RTKSGNIGVHGGAKKFSLVADSSDVEE 103
           R+K+ NI + G AK FS  +D  D  E
Sbjct: 167 RSKNSNI-IEGDAKSFSYSSDCEDCNE 192

The following BLAST results are available for this feature:
BLAST of CsGy3G020180 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57731.15.8e-13297.77hypothetical protein Csa_3G265270 [Cucumis sativus][more]
XP_011651364.15.8e-13297.77PREDICTED: transcription factor CYCLOIDEA [Cucumis sativus][more]
XP_008461599.26.0e-11388.89PREDICTED: transcription factor TCP1 [Cucumis melo][more]
XP_023521549.18.5e-5959.57transcription factor DICHOTOMA-like [Cucurbita pepo subsp. pepo] >XP_023524593.1... [more]
XP_022143422.13.2e-5858.03transcription factor TEOSINTE BRANCHED 1-like [Momordica charantia][more]
BLAST of CsGy3G020180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67260.11.2e-2271.05TCP family transcription factor [more]
AT1G68800.17.7e-2265.43TCP domain protein 12[more]
AT3G18550.14.9e-1659.38TCP family transcription factor [more]
AT2G31070.17.0e-1558.33TCP domain protein 10[more]
AT1G53230.11.2e-1453.73TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
BLAST of CsGy3G020180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FYG7|TCP1_ARATH2.2e-2171.05Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1[more]
sp|A0AQW4|TCP12_ARATH1.4e-2065.43Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1[more]
sp|O49250|CYCLD_ANTMA6.9e-2052.07Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1[more]
sp|Q9SBV9|CYCLD_ANTMH6.9e-2052.14Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
sp|Q9SBV6|CYCLD_ANTML6.9e-2052.07Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
BLAST of CsGy3G020180 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCE8|A0A0A0LCE8_CUCSA3.8e-13297.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G265270 PE=4 SV=1[more]
tr|A0A1S3CGD1|A0A1S3CGD1_CUCME4.0e-11388.89transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1[more]
tr|A0A1J7HXK1|A0A1J7HXK1_LUPAN3.7e-2674.71Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26698 PE=4 S... [more]
tr|K7LXS7|K7LXS7_SOYBN1.4e-2575.00Uncharacterized protein OS=Glycine max OX=3847 GN=100801549 PE=4 SV=1[more]
tr|Q6VM70|Q6VM70_LUPTE1.8e-2573.56CYCLOIDEA-like group 1B protein (Fragment) OS=Lupinus texensis OX=28959 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017888CYC/TB1_R_domain
IPR017887TF_TCP_subgr
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020180.1CsGy3G020180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 15..159
e-value: 1.2E-43
score: 149.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..180
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 16..246
NoneNo IPR availablePANTHERPTHR31072:SF18SUBFAMILY NOT NAMEDcoord: 16..246
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 16..74
score: 36.486
IPR017888CYC/TB1, R domainPROSITEPS51370Rcoord: 140..157
score: 12.397